RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 NUDCD2Q8WVJ2 157 aa8.83□□□□□ -1
VPS13D-210ENST00000489961 IL1F10Q8WWZ1 152 aa8.83□□□□□ -1
VPS13D-210ENST00000489961 RBM38Q9H0Z9 239 aaKnown RBP8.83□□□□□ -1
VPS13D-210ENST00000489961 MMP28Q9H239 520 aa8.83□□□□□ -1
VPS13D-210ENST00000489961 ZNRD1Q9P1U0 126 aa8.83□□□□□ -1
VPS13D-210ENST00000489961 DPM3Q9P2X0 92 aa8.83□□□□□ -1
VPS13D-210ENST00000489961 ADAM30Q9UKF2 790 aa8.83□□□□□ -1
VPS13D-210ENST00000489961 ELF5Q9UKW6 265 aaPredicted RBP8.83□□□□□ -1
VPS13D-210ENST00000489961 PSG11Q9UQ72 335 aa8.83□□□□□ -1
VPS13D-210ENST00000489961 NIPBLQ6KC79 2804 aaeCLIP8.82□□□□□ -1
VPS13D-210ENST00000489961 BTBD17A6NE02 478 aa8.82□□□□□ -1
VPS13D-210ENST00000489961 LEUTXA8MZ59 168 aa8.82□□□□□ -1
VPS13D-210ENST00000489961 BUB1B-PAK6H3BSN5 160 aa8.82□□□□□ -1
VPS13D-210ENST00000489961 TRIM77I1YAP6 450 aa8.82□□□□□ -1
VPS13D-210ENST00000489961 RGS5O15539 181 aa8.82□□□□□ -1
VPS13D-210ENST00000489961 HOXA3O43365 443 aaPredicted RBP8.82□□□□□ -1
VPS13D-210ENST00000489961 MELTFP08582 738 aa8.82□□□□□ -1
VPS13D-210ENST00000489961 ELK1P19419 428 aa8.82□□□□□ -1
VPS13D-210ENST00000489961 TAS2R20P59543 309 aa8.82□□□□□ -1
VPS13D-210ENST00000489961 SSX2Q16385 188 aa8.82□□□□□ -1
VPS13D-210ENST00000489961 SRSF7Q16629 238 aaKnown RBP eCLIP8.82□□□□□ -1
VPS13D-210ENST00000489961 UTF1Q5T230 341 aa8.82□□□□□ -1
VPS13D-210ENST00000489961 LINC00311Q8N616 119 aa8.82□□□□□ -1
VPS13D-210ENST00000489961 C8orf31Q8N9H6 132 aa8.82□□□□□ -1
VPS13D-210ENST00000489961 DTX3Q8N9I9 347 aa8.82□□□□□ -1
VPS13D-210ENST00000489961 OR52L2PQ8NGH6 319 aa8.82□□□□□ -1
VPS13D-210ENST00000489961 OR10V1Q8NGI7 309 aa8.82□□□□□ -1
VPS13D-210ENST00000489961 OR4A4PQ8NGN8 299 aa8.82□□□□□ -1
VPS13D-210ENST00000489961 OR10X1Q8NGY0 326 aa8.82□□□□□ -1
VPS13D-210ENST00000489961 C17orf50Q8WW18 174 aa8.82□□□□□ -1
VPS13D-210ENST00000489961 SSMEM1Q8WWF3 244 aa8.82□□□□□ -1
VPS13D-210ENST00000489961 MEGF9Q9H1U4 602 aa8.82□□□□□ -1
VPS13D-210ENST00000489961 DPAGT1Q9H3H5 408 aa8.82□□□□□ -1
VPS13D-210ENST00000489961 AUNIPQ9H7T9 357 aa8.82□□□□□ -1
VPS13D-210ENST00000489961 DNAJC9-AS1A6NH13 148 aa8.81□□□□□ -1
VPS13D-210ENST00000489961 FABP7O15540 132 aa8.81□□□□□ -1
VPS13D-210ENST00000489961 HSPA12AO43301 675 aa8.81□□□□□ -1
VPS13D-210ENST00000489961 YPEL1O60688 119 aa8.81□□□□□ -1
VPS13D-210ENST00000489961 VENTXO95231 258 aa8.81□□□□□ -1
VPS13D-210ENST00000489961 SCTP09683 121 aa8.81□□□□□ -1
VPS13D-210ENST00000489961 ZBTB25P24278 435 aa8.81□□□□□ -1
VPS13D-210ENST00000489961 IL3RAP26951 378 aa8.81□□□□□ -1
VPS13D-210ENST00000489961 PPP1CCP36873 323 aaKnown RBP8.81□□□□□ -1
VPS13D-210ENST00000489961 CBX5P45973 191 aa8.81□□□□□ -1
VPS13D-210ENST00000489961 IER3P46695 156 aa8.81□□□□□ -1
VPS13D-210ENST00000489961 ARHGDIBP52566 201 aa8.81□□□□□ -1
VPS13D-210ENST00000489961 MADCAM1Q13477 382 aa8.81□□□□□ -1
VPS13D-210ENST00000489961 GNMTQ14749 295 aa8.81□□□□□ -1
VPS13D-210ENST00000489961 AANATQ16613 207 aa8.81□□□□□ -1
VPS13D-210ENST00000489961 LRRC75BQ2VPJ9 315 aa8.81□□□□□ -1
VPS13D-210ENST00000489961 MORN2Q502X0 79 aa8.81□□□□□ -1
VPS13D-210ENST00000489961 Q6ZS49 121 aa8.81□□□□□ -1
VPS13D-210ENST00000489961 C5orf24Q7Z6I8 188 aa8.81□□□□□ -1
VPS13D-210ENST00000489961 TMEM86BQ8N661 226 aa8.81□□□□□ -1
VPS13D-210ENST00000489961 ZDHHC22Q8N966 263 aa8.81□□□□□ -1
VPS13D-210ENST00000489961 MCFD2Q8NI22 146 aa8.81□□□□□ -1
VPS13D-210ENST00000489961 MAFIPQ8WZ33 124 aa8.81□□□□□ -1
VPS13D-210ENST00000489961 RPEQ96AT9 228 aa8.81□□□□□ -1
VPS13D-210ENST00000489961 DGCR14Q96DF8 476 aaKnown RBP8.81□□□□□ -1
VPS13D-210ENST00000489961 AJUBAQ96IF1 538 aa8.81□□□□□ -1
VPS13D-210ENST00000489961 YPEL2Q96QA6 119 aa8.81□□□□□ -1
VPS13D-210ENST00000489961 OCSTAMPQ9BR26 566 aa8.81□□□□□ -1
VPS13D-210ENST00000489961 ST6GALNAC5Q9BVH7 336 aa8.81□□□□□ -1
VPS13D-210ENST00000489961 ABCB10Q9NRK6 738 aa8.81□□□□□ -1
VPS13D-210ENST00000489961 SLC23A1Q9UHI7 598 aa8.81□□□□□ -1
VPS13D-210ENST00000489961 ZNF230Q9UIE0 474 aaPredicted RBP8.81□□□□□ -1
VPS13D-210ENST00000489961 HILPDAQ9Y5L2 63 aa8.81□□□□□ -1
VPS13D-210ENST00000489961 POMT1Q9Y6A1 747 aa8.81□□□□□ -1
VPS13D-210ENST00000489961 MXRA5Q9NR99 2828 aa8.81□□□□□ -1
VPS13D-210ENST00000489961 SETD2Q9BYW2 2564 aaPredicted RBP8.81□□□□□ -1
VPS13D-210ENST00000489961 A0A1W2PPE3 182 aa8.8□□□□□ -1
VPS13D-210ENST00000489961 DPPA5A6NC42 116 aa8.8□□□□□ -1
VPS13D-210ENST00000489961 OOSP1A8MZH6 123 aa8.8□□□□□ -1
VPS13D-210ENST00000489961 CLDN34H7C241 214 aa8.8□□□□□ -1
VPS13D-210ENST00000489961 SSX5O60225 188 aa8.8□□□□□ -1
VPS13D-210ENST00000489961 DIRAS3O95661 229 aa8.8□□□□□ -1
VPS13D-210ENST00000489961 LPLP06858 475 aa8.8□□□□□ -1
VPS13D-210ENST00000489961 GSTT2P0CG29 244 aa8.8□□□□□ -1
VPS13D-210ENST00000489961 GSTT2BP0CG30 244 aa8.8□□□□□ -1
VPS13D-210ENST00000489961 PRSS3P35030 304 aa8.8□□□□□ -1
VPS13D-210ENST00000489961 UBA52P62987 128 aaKnown RBP8.8□□□□□ -1
VPS13D-210ENST00000489961 SLC9A3R2Q15599 337 aa8.8□□□□□ -1
VPS13D-210ENST00000489961 LY6G6FQ5SQ64 297 aa8.8□□□□□ -1
VPS13D-210ENST00000489961 LDLRAD2Q5SZI1 272 aa8.8□□□□□ -1
VPS13D-210ENST00000489961 TPTE2P1Q5T6R2 138 aa8.8□□□□□ -1
VPS13D-210ENST00000489961 FAM53AQ6NSI3 398 aaPredicted RBP8.8□□□□□ -1
VPS13D-210ENST00000489961 CCDC144NLQ6NUI1 221 aa8.8□□□□□ -1
VPS13D-210ENST00000489961 SLC25A48Q6ZT89 311 aaKnown RBP8.8□□□□□ -1
VPS13D-210ENST00000489961 ZNF439Q8NDP4 499 aa8.8□□□□□ -1
VPS13D-210ENST00000489961 OR2AK2Q8NG84 335 aa8.8□□□□□ -1
VPS13D-210ENST00000489961 OR5R1Q8NH85 324 aa8.8□□□□□ -1
VPS13D-210ENST00000489961 ZFAND2BQ8WV99 257 aa8.8□□□□□ -1
VPS13D-210ENST00000489961 EDARADDQ8WWZ3 215 aa8.8□□□□□ -1
VPS13D-210ENST00000489961 TOMM40LQ969M1 308 aa8.8□□□□□ -1
VPS13D-210ENST00000489961 DUX5Q96PT3 197 aa8.8□□□□□ -1
VPS13D-210ENST00000489961 SSX3Q99909 188 aa8.8□□□□□ -1
VPS13D-210ENST00000489961 DCUN1D5Q9BTE7 237 aa8.8□□□□□ -1
VPS13D-210ENST00000489961 ABHD14AQ9BUJ0 271 aa8.8□□□□□ -1
VPS13D-210ENST00000489961 SLIRPQ9GZT3 109 aaKnown RBP8.8□□□□□ -1
VPS13D-210ENST00000489961 C6orf62Q9GZU0 229 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms