RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 DPCDQ9BVM2 203 aaPredicted RBP8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 MMP28Q9H239 520 aa8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 PPA2Q9H2U2 334 aa8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 GPN1Q9HCN4 374 aaPredicted RBP8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 AK3Q9UIJ7 227 aa8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 ANAPC10Q9UM13 185 aa8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 POMT1Q9Y6A1 747 aa8.65□□□□□ -1.02
SCAMP4-208ENST00000489554 TRBV23-1A0A0A0MS06 115 aa8.64□□□□□ -1.03
SCAMP4-208ENST00000489554 UBE2QL1A1L167 161 aa8.64□□□□□ -1.03
SCAMP4-208ENST00000489554 K7N7A8 449 aa8.64□□□□□ -1.03
SCAMP4-208ENST00000489554 M0R1W7 72 aa8.64□□□□□ -1.03
SCAMP4-208ENST00000489554 HSPB6O14558 160 aa8.64□□□□□ -1.03
SCAMP4-208ENST00000489554 LANCL1O43813 399 aa8.64□□□□□ -1.03
SCAMP4-208ENST00000489554 CA11O75493 328 aa8.64□□□□□ -1.03
SCAMP4-208ENST00000489554 NAPSAO96009 420 aa8.64□□□□□ -1.03
SCAMP4-208ENST00000489554 TK1P04183 234 aa8.64□□□□□ -1.03
SCAMP4-208ENST00000489554 CSN2P05814 226 aa8.64□□□□□ -1.03
SCAMP4-208ENST00000489554 GSTP1P09211 210 aaKnown RBP8.64□□□□□ -1.03
SCAMP4-208ENST00000489554 H2AFB2P0C5Z0 115 aa8.64□□□□□ -1.03
SCAMP4-208ENST00000489554 NDUFB7P17568 137 aa8.64□□□□□ -1.03
SCAMP4-208ENST00000489554 CBX5P45973 191 aa8.64□□□□□ -1.03
SCAMP4-208ENST00000489554 TATDN3Q17R31 274 aa8.64□□□□□ -1.03
SCAMP4-208ENST00000489554 PNLIPRP3Q17RR3 467 aa8.64□□□□□ -1.03
SCAMP4-208ENST00000489554 ATAD3CQ5T2N8 411 aa8.64□□□□□ -1.03
SCAMP4-208ENST00000489554 FIP1L1Q6UN15 594 aaKnown RBP8.64□□□□□ -1.03
SCAMP4-208ENST00000489554 ZNF561Q8N587 486 aa8.64□□□□□ -1.03
SCAMP4-208ENST00000489554 TMEM229BQ8NBD8 167 aa8.64□□□□□ -1.03
SCAMP4-208ENST00000489554 TMEM185AQ8NFB2 350 aa8.64□□□□□ -1.03
SCAMP4-208ENST00000489554 GPX8Q8TED1 209 aa8.64□□□□□ -1.03
SCAMP4-208ENST00000489554 NUDCD2Q8WVJ2 157 aa8.64□□□□□ -1.03
SCAMP4-208ENST00000489554 SSMEM1Q8WWF3 244 aa8.64□□□□□ -1.03
SCAMP4-208ENST00000489554 SNX22Q96L94 193 aa8.64□□□□□ -1.03
SCAMP4-208ENST00000489554 CHST6Q9GZX3 395 aa8.64□□□□□ -1.03
SCAMP4-208ENST00000489554 SPACA1Q9HBV2 294 aa8.64□□□□□ -1.03
SCAMP4-208ENST00000489554 HRASLSQ9HDD0 168 aa8.64□□□□□ -1.03
SCAMP4-208ENST00000489554 SERPINE3A8MV23 424 aa8.63□□□□□ -1.03
SCAMP4-208ENST00000489554 TBPP20226 339 aa8.63□□□□□ -1.03
SCAMP4-208ENST00000489554 MEF2DQ14814 521 aa8.63□□□□□ -1.03
SCAMP4-208ENST00000489554 ATXN7L3Q14CW9 347 aaPredicted RBP8.63□□□□□ -1.03
SCAMP4-208ENST00000489554 PAN3Q58A45 887 aaKnown RBP8.63□□□□□ -1.03
SCAMP4-208ENST00000489554 NCR3LG1Q68D85 454 aa8.63□□□□□ -1.03
SCAMP4-208ENST00000489554 ZNF880Q6PDB4 577 aa8.63□□□□□ -1.03
SCAMP4-208ENST00000489554 ZNF497Q6ZNH5 498 aa8.63□□□□□ -1.03
SCAMP4-208ENST00000489554 TCF23Q7RTU1 214 aa8.63□□□□□ -1.03
SCAMP4-208ENST00000489554 LDLRAD3Q86YD5 345 aa8.63□□□□□ -1.03
SCAMP4-208ENST00000489554 ASCC1Q8N9N2 400 aaKnown RBP8.63□□□□□ -1.03
SCAMP4-208ENST00000489554 SGMS2Q8NHU3 365 aa8.63□□□□□ -1.03
SCAMP4-208ENST00000489554 MRPL30Q8TCC3 161 aaKnown RBP8.63□□□□□ -1.03
SCAMP4-208ENST00000489554 SLC25A21Q9BQT8 299 aaPredicted RBP8.63□□□□□ -1.03
SCAMP4-208ENST00000489554 ZNF747Q9BV97 191 aa8.63□□□□□ -1.03
SCAMP4-208ENST00000489554 MED28Q9H204 178 aa8.63□□□□□ -1.03
SCAMP4-208ENST00000489554 METTL8Q9H825 291 aaKnown RBP8.63□□□□□ -1.03
SCAMP4-208ENST00000489554 UNKLQ9H9P5 680 aaKnown RBP8.63□□□□□ -1.03
SCAMP4-208ENST00000489554 SIRT7Q9NRC8 400 aa8.63□□□□□ -1.03
SCAMP4-208ENST00000489554 PLEKHJ1Q9NW61 149 aa8.63□□□□□ -1.03
SCAMP4-208ENST00000489554 SCP2D1Q9UJQ7 156 aa8.63□□□□□ -1.03
SCAMP4-208ENST00000489554 FAM96BQ9Y3D0 163 aa8.63□□□□□ -1.03
SCAMP4-208ENST00000489554 IGKV1D-8A0A087WSZ0 117 aa8.62□□□□□ -1.03
SCAMP4-208ENST00000489554 TRBV6-6A0A0A6YYG2 114 aa8.62□□□□□ -1.03
SCAMP4-208ENST00000489554 A0A0U1RQK1 487 aa8.62□□□□□ -1.03
SCAMP4-208ENST00000489554 A0A1W2PPH5 198 aa8.62□□□□□ -1.03
SCAMP4-208ENST00000489554 POM121CA8CG34 1229 aa8.62□□□□□ -1.03
SCAMP4-208ENST00000489554 DISC1C4P0D8 188 aa8.62□□□□□ -1.03
SCAMP4-208ENST00000489554 PEX14O75381 377 aa8.62□□□□□ -1.03
SCAMP4-208ENST00000489554 MT-ND4P03905 459 aa8.62□□□□□ -1.03
SCAMP4-208ENST00000489554 CRYBA1P05813 215 aa8.62□□□□□ -1.03
SCAMP4-208ENST00000489554 FBP1P09467 338 aa8.62□□□□□ -1.03
SCAMP4-208ENST00000489554 GLIPR1P48060 266 aa8.62□□□□□ -1.03
SCAMP4-208ENST00000489554 RPL15P61313 204 aaKnown RBP8.62□□□□□ -1.03
SCAMP4-208ENST00000489554 RRAS2P62070 204 aaPredicted RBP8.62□□□□□ -1.03
SCAMP4-208ENST00000489554 AESQ08117 197 aa8.62□□□□□ -1.03
SCAMP4-208ENST00000489554 RBMS2Q15434 407 aaKnown RBP8.62□□□□□ -1.03
SCAMP4-208ENST00000489554 ACTBL2Q562R1 376 aa8.62□□□□□ -1.03
SCAMP4-208ENST00000489554 SHISA2Q6UWI4 295 aa8.62□□□□□ -1.03
SCAMP4-208ENST00000489554 C5orf24Q7Z6I8 188 aa8.62□□□□□ -1.03
SCAMP4-208ENST00000489554 PDZD9Q8IXQ8 264 aa8.62□□□□□ -1.03
SCAMP4-208ENST00000489554 PIP4P2Q8N4L2 257 aa8.62□□□□□ -1.03
SCAMP4-208ENST00000489554 GVQW1Q8N7I0 195 aa8.62□□□□□ -1.03
SCAMP4-208ENST00000489554 Q8N7P7 452 aa8.62□□□□□ -1.03
SCAMP4-208ENST00000489554 TPRX1Q8N7U7 411 aa8.62□□□□□ -1.03
SCAMP4-208ENST00000489554 OR5D13Q8NGL4 314 aa8.62□□□□□ -1.03
SCAMP4-208ENST00000489554 CCDC107Q8WV48 283 aa8.62□□□□□ -1.03
SCAMP4-208ENST00000489554 FAM234AQ9H0X4 552 aa8.62□□□□□ -1.03
SCAMP4-208ENST00000489554 MCUBQ9NWR8 336 aa8.62□□□□□ -1.03
SCAMP4-208ENST00000489554 KLK11Q9UBX7 282 aa8.62□□□□□ -1.03
SCAMP4-208ENST00000489554 GLS2Q9UI32 602 aa8.62□□□□□ -1.03
SCAMP4-208ENST00000489554 A0A1B0GUS0 222 aa8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 C7orf66A4D0T2 115 aa8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 MEIS3P1A6NDR6 274 aa8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 FAM181BA6NEQ2 426 aa8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 MCRIP1C9JLW8 97 aa8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 RNASEK-C17orf49H0YIS7 233 aa8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 MGST3O14880 152 aa8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 NPFFO15130 113 aa8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 IL5P05113 134 aa8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 FCGR3AP08637 254 aa8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 CGB3P0DN86 165 aa8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 CGB7P0DN87 165 aa8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 NAT1P18440 290 aa8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 ERP29P30040 261 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms