RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 ZNF562Q6V9R5 426 aa8.48□□□□□ -1.05
HDAC6-233ENST00000489352 RBPMS2Q6ZRY4 209 aaKnown RBP8.48□□□□□ -1.05
HDAC6-233ENST00000489352 LINC00596Q86U02 117 aa8.48□□□□□ -1.05
HDAC6-233ENST00000489352 TMEM61Q8N0U2 210 aa8.48□□□□□ -1.05
HDAC6-233ENST00000489352 OR1L6Q8NGR2 347 aa8.48□□□□□ -1.05
HDAC6-233ENST00000489352 OR4A5Q8NH83 315 aa8.48□□□□□ -1.05
HDAC6-233ENST00000489352 GRPEL2Q8TAA5 225 aa8.48□□□□□ -1.05
HDAC6-233ENST00000489352 PP6455Q8WZ26 134 aa8.48□□□□□ -1.05
HDAC6-233ENST00000489352 RNF126Q9BV68 326 aa8.48□□□□□ -1.05
HDAC6-233ENST00000489352 YIPF3Q9GZM5 350 aa8.48□□□□□ -1.05
HDAC6-233ENST00000489352 GAB2Q9UQC2 676 aa8.48□□□□□ -1.05
HDAC6-233ENST00000489352 TMEM14AQ9Y6G1 99 aa8.48□□□□□ -1.05
HDAC6-233ENST00000489352 R4GMQ9 66 aa8.48□□□□□ -1.05
HDAC6-233ENST00000489352 DNAH5Q8TE73 4624 aa8.47□□□□□ -1.05
HDAC6-233ENST00000489352 PRODHO43272 600 aa8.47□□□□□ -1.05
HDAC6-233ENST00000489352 GMNNO75496 209 aa8.47□□□□□ -1.05
HDAC6-233ENST00000489352 GSTP1P09211 210 aaKnown RBP8.47□□□□□ -1.05
HDAC6-233ENST00000489352 NCK1P16333 377 aa8.47□□□□□ -1.05
HDAC6-233ENST00000489352 DEFA5Q01523 94 aa8.47□□□□□ -1.05
HDAC6-233ENST00000489352 ROM1Q03395 351 aa8.47□□□□□ -1.05
HDAC6-233ENST00000489352 TNP2Q05952 138 aa8.47□□□□□ -1.05
HDAC6-233ENST00000489352 CDK5R1Q15078 307 aa8.47□□□□□ -1.05
HDAC6-233ENST00000489352 SERTAD4-AS1Q5TG53 156 aa8.47□□□□□ -1.05
HDAC6-233ENST00000489352 Q6ZR54 194 aa8.47□□□□□ -1.05
HDAC6-233ENST00000489352 ARPINQ7Z6K5 226 aa8.47□□□□□ -1.05
HDAC6-233ENST00000489352 OR9Q2Q8NGE9 314 aa8.47□□□□□ -1.05
HDAC6-233ENST00000489352 CNIH3Q8TBE1 160 aa8.47□□□□□ -1.05
HDAC6-233ENST00000489352 FRZBQ92765 325 aa8.47□□□□□ -1.05
HDAC6-233ENST00000489352 NDUFAF3Q9BU61 184 aa8.47□□□□□ -1.05
HDAC6-233ENST00000489352 C6orf62Q9GZU0 229 aaPredicted RBP8.47□□□□□ -1.05
HDAC6-233ENST00000489352 PARP12Q9H0J9 701 aaKnown RBP8.47□□□□□ -1.05
HDAC6-233ENST00000489352 RAB9BQ9NP90 201 aa8.47□□□□□ -1.05
HDAC6-233ENST00000489352 GMPR2Q9P2T1 348 aaKnown RBP8.47□□□□□ -1.05
HDAC6-233ENST00000489352 UBQLN2Q9UHD9 624 aa8.47□□□□□ -1.05
HDAC6-233ENST00000489352 ING4Q9UNL4 249 aa8.47□□□□□ -1.05
HDAC6-233ENST00000489352 IGKV1-12A0A0C4DH73 117 aa8.46□□□□□ -1.06
HDAC6-233ENST00000489352 HTR3BO95264 441 aa8.46□□□□□ -1.06
HDAC6-233ENST00000489352 IGKV1D-12P01611 117 aa8.46□□□□□ -1.06
HDAC6-233ENST00000489352 CBLN1P23435 193 aa8.46□□□□□ -1.06
HDAC6-233ENST00000489352 ZNF134P52741 427 aa8.46□□□□□ -1.06
HDAC6-233ENST00000489352 MAPRE2Q15555 327 aa8.46□□□□□ -1.06
HDAC6-233ENST00000489352 CT45A1Q5HYN5 189 aa8.46□□□□□ -1.06
HDAC6-233ENST00000489352 Q6ZSR3 168 aa8.46□□□□□ -1.06
HDAC6-233ENST00000489352 KCTD20Q7Z5Y7 419 aa8.46□□□□□ -1.06
HDAC6-233ENST00000489352 OR2C3Q8N628 320 aa8.46□□□□□ -1.06
HDAC6-233ENST00000489352 OR10V1Q8NGI7 309 aa8.46□□□□□ -1.06
HDAC6-233ENST00000489352 OR5D18Q8NGL1 313 aa8.46□□□□□ -1.06
HDAC6-233ENST00000489352 CT45A3Q8NHU0 189 aa8.46□□□□□ -1.06
HDAC6-233ENST00000489352 PLPPR1Q8TBJ4 325 aa8.46□□□□□ -1.06
HDAC6-233ENST00000489352 TEX47Q8TBZ9 253 aa8.46□□□□□ -1.06
HDAC6-233ENST00000489352 ASB9Q96DX5 294 aa8.46□□□□□ -1.06
HDAC6-233ENST00000489352 MRPL20Q9BYC9 149 aaKnown RBP8.46□□□□□ -1.06
HDAC6-233ENST00000489352 MAP6D1Q9H9H5 199 aa8.46□□□□□ -1.06
HDAC6-233ENST00000489352 CMTM6Q9NX76 183 aa8.46□□□□□ -1.06
HDAC6-233ENST00000489352 COA4Q9NYJ1 87 aa8.46□□□□□ -1.06
HDAC6-233ENST00000489352 V9GYQ6 96 aa8.46□□□□□ -1.06
HDAC6-233ENST00000489352 TRAV24A0A0B4J272 114 aa8.45□□□□□ -1.06
HDAC6-233ENST00000489352 TMEM30CPA0ZSE6 113 aa8.45□□□□□ -1.06
HDAC6-233ENST00000489352 BMPR1BO00238 502 aa8.45□□□□□ -1.06
HDAC6-233ENST00000489352 SLC22A1O15245 554 aa8.45□□□□□ -1.06
HDAC6-233ENST00000489352 SPINT2O43291 252 aa8.45□□□□□ -1.06
HDAC6-233ENST00000489352 ORC5O43913 435 aa8.45□□□□□ -1.06
HDAC6-233ENST00000489352 CA2P00918 260 aa8.45□□□□□ -1.06
HDAC6-233ENST00000489352 GASTP01350 101 aa8.45□□□□□ -1.06
HDAC6-233ENST00000489352 MRPL3P09001 348 aaKnown RBP8.45□□□□□ -1.06
HDAC6-233ENST00000489352 TMEM225BP0DP42 221 aa8.45□□□□□ -1.06
HDAC6-233ENST00000489352 CCL1P22362 96 aa8.45□□□□□ -1.06
HDAC6-233ENST00000489352 FXYD3Q14802 87 aa8.45□□□□□ -1.06
HDAC6-233ENST00000489352 SPATS1Q496A3 300 aa8.45□□□□□ -1.06
HDAC6-233ENST00000489352 SLC35D3Q5M8T2 416 aa8.45□□□□□ -1.06
HDAC6-233ENST00000489352 C6orf141Q5SZD1 244 aa8.45□□□□□ -1.06
HDAC6-233ENST00000489352 STEAP3Q658P3 488 aa8.45□□□□□ -1.06
HDAC6-233ENST00000489352 Q6ZRM9 215 aa8.45□□□□□ -1.06
HDAC6-233ENST00000489352 CROCCP2Q86T23 111 aa8.45□□□□□ -1.06
HDAC6-233ENST00000489352 ZDHHC13Q8IUH4 622 aa8.45□□□□□ -1.06
HDAC6-233ENST00000489352 PRR18Q8N4B5 295 aa8.45□□□□□ -1.06
HDAC6-233ENST00000489352 CCDC54Q8NEL0 328 aa8.45□□□□□ -1.06
HDAC6-233ENST00000489352 OR13C5Q8NGS8 318 aa8.45□□□□□ -1.06
HDAC6-233ENST00000489352 CCDC107Q8WV48 283 aa8.45□□□□□ -1.06
HDAC6-233ENST00000489352 C10orf35Q96D05 121 aa8.45□□□□□ -1.06
HDAC6-233ENST00000489352 GALNT14Q96FL9 552 aa8.45□□□□□ -1.06
HDAC6-233ENST00000489352 OPALINQ96PE5 141 aa8.45□□□□□ -1.06
HDAC6-233ENST00000489352 APOL4Q9BPW4 351 aa8.45□□□□□ -1.06
HDAC6-233ENST00000489352 HRH4Q9H3N8 390 aa8.45□□□□□ -1.06
HDAC6-233ENST00000489352 METTL1Q9UBP6 276 aaKnown RBP8.45□□□□□ -1.06
HDAC6-233ENST00000489352 MPTX1A8MV57 137 aa8.44□□□□□ -1.06
HDAC6-233ENST00000489352 H3BN98 237 aa8.44□□□□□ -1.06
HDAC6-233ENST00000489352 C15orf65H3BRN8 121 aa8.44□□□□□ -1.06
HDAC6-233ENST00000489352 H7C2Y5 167 aa8.44□□□□□ -1.06
HDAC6-233ENST00000489352 TUSC2O75896 110 aa8.44□□□□□ -1.06
HDAC6-233ENST00000489352 FABP3P05413 133 aa8.44□□□□□ -1.06
HDAC6-233ENST00000489352 T-ENOLP0DO92 83 aa8.44□□□□□ -1.06
HDAC6-233ENST00000489352 DBTP11182 482 aaKnown RBP8.44□□□□□ -1.06
HDAC6-233ENST00000489352 ATF1P18846 271 aa8.44□□□□□ -1.06
HDAC6-233ENST00000489352 EDN2P20800 178 aa8.44□□□□□ -1.06
HDAC6-233ENST00000489352 HLA-DMBP28068 263 aa8.44□□□□□ -1.06
HDAC6-233ENST00000489352 MAGEA2P43356 314 aa8.44□□□□□ -1.06
HDAC6-233ENST00000489352 PAX5Q02548 391 aa8.44□□□□□ -1.06
HDAC6-233ENST00000489352 TNFAIP8L3Q5GJ75 292 aa8.44□□□□□ -1.06
HDAC6-233ENST00000489352 Q5VSD8 79 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms