RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 ABCB10Q9NRK6 738 aa6.61□□□□□ -1.35
TRAPPC12-221ENST00000489032 HIF1ANQ9NWT6 349 aa6.61□□□□□ -1.35
TRAPPC12-221ENST00000489032 MTCH1Q9NZJ7 389 aa6.61□□□□□ -1.35
TRAPPC12-221ENST00000489032 ABRACLQ9P1F3 81 aa6.61□□□□□ -1.35
TRAPPC12-221ENST00000489032 COMMD3Q9UBI1 195 aa6.61□□□□□ -1.35
TRAPPC12-221ENST00000489032 KAAG1Q9UBP8 84 aa6.61□□□□□ -1.35
TRAPPC12-221ENST00000489032 OR14J1Q9UGF5 321 aa6.61□□□□□ -1.35
TRAPPC12-221ENST00000489032 ING4Q9UNL4 249 aa6.61□□□□□ -1.35
TRAPPC12-221ENST00000489032 TRAV8-7A0A075B6U6 113 aa6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 LOC105371242A0A075B767 164 aa6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 A0A087X0M5 115 aa6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 PPIAL4CA0A0B4J2A2 164 aa6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 A0A1B0GX30 115 aa6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 A8MXK9 166 aa6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 FAM25AB3EWG3 89 aa6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 FAM25CB3EWG5 89 aa6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 FAM25GB3EWG6 89 aa6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 J3QLI3 93 aa6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 DVL1O14640 695 aa6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 ANGPTL7O43827 346 aa6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 PFDN1O60925 122 aa6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 KDM4BO94953 1096 aa6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 PTTG1O95997 202 aa6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 BCL3P20749 454 aa6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 PRDX2P32119 198 aa6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 ARL3P36405 182 aa6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 PTGFRP43088 359 aa6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 P2RX3P56373 397 aa6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 SCN1BQ07699 218 aa6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 OXA1LQ15070 435 aa6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 SPIN3Q5JUX0 258 aa6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 FAHD2BQ6P2I3 314 aaPredicted RBP6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 BAIAP2L2Q6UXY1 529 aa6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 LAX1Q8IWV1 398 aa6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 ZNF561Q8N587 486 aa6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 TMEM185AQ8NFB2 350 aa6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 PPP1R14BQ96C90 147 aa6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 ORAI1Q96D31 301 aa6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 SEH1LQ96EE3 360 aa6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 FAHD2AQ96GK7 314 aa6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 UQCC2Q9BRT2 126 aa6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 HES4Q9HCC6 221 aa6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 PAM16Q9Y3D7 125 aa6.6□□□□□ -1.35
TRAPPC12-221ENST00000489032 IGKV1D-17A0A075B6S4 117 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 A0A1B0GVG6 124 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 SMIM30A4D0T7 59 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 USP17L23D6RBM5 183 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 SH2D1BO14796 132 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 TNFRSF13BO14836 293 aaPredicted RBP6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 SIGLEC5O15389 551 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 PIN1P1O15428 100 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 ENSAO43768 121 aaKnown RBP6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 HPGDSO60760 199 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 HAND1O96004 215 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 LIPFP07098 398 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 SRP14P37108 136 aaKnown RBP6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 OR3A4PP47883 348 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 NPBWR2P48146 333 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 COMPP49747 757 aaPredicted RBP6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 SNU13P55769 128 aaKnown RBP6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 CAV3P56539 151 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 FGF12P61328 243 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 ERVK11-1P61568 191 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 SEC61A1P61619 476 aaKnown RBP6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 ACTG1P63261 375 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 PITPNAQ00169 270 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 PYDC2Q56P42 97 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 FAM27D1Q5T7N8 215 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 AWAT2Q6E213 333 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 ASPHD2Q6ICH7 369 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 CNIH2Q6PI25 160 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 C1QL2Q7Z5L3 287 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 FAM216BQ8N7L0 139 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 ASCC1Q8N9N2 400 aaKnown RBP6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 POC5Q8NA72 575 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 OR5D13Q8NGL4 314 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 H1FXQ92522 213 aaKnown RBP6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 SDSLQ96GA7 329 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 GAFA1Q96PS6 74 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 NUDT16L1Q9BRJ7 211 aaKnown RBP6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 SRRQ9GZT4 340 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 PPIL3Q9H2H8 161 aaKnown RBP6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 MIXL1Q9H2W2 232 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 SEBOXQ9HB31 216 aaPredicted RBP6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 RBFOX1Q9NWB1 397 aaKnown RBP6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 IL36RNQ9UBH0 155 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 CTSZQ9UBR2 303 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 GHRLQ9UBU3 117 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 MRPS28Q9Y2Q9 187 aaKnown RBP6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 V9GY05 133 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 V9GYH0 126 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 MALRD1Q5VYJ5 2156 aa6.59□□□□□ -1.35
TRAPPC12-221ENST00000489032 NBEAL2Q6ZNJ1 2754 aa6.58□□□□□ -1.36
TRAPPC12-221ENST00000489032 IGHV2-70DA0A0C4DH43 119 aa6.58□□□□□ -1.36
TRAPPC12-221ENST00000489032 IGKV1-12A0A0C4DH73 117 aa6.58□□□□□ -1.36
TRAPPC12-221ENST00000489032 FUOMA2VDF0 154 aa6.58□□□□□ -1.36
TRAPPC12-221ENST00000489032 F8VVB4 439 aa6.58□□□□□ -1.36
TRAPPC12-221ENST00000489032 F8VWA3 439 aa6.58□□□□□ -1.36
TRAPPC12-221ENST00000489032 AIPO00170 330 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms