RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 TSPAN5P62079 268 aa13.15□□□□□ -0.3
CLDN11-208ENST00000488989 LCN2P80188 198 aa13.15□□□□□ -0.3
CLDN11-208ENST00000488989 RGS21Q2M5E4 152 aa13.15□□□□□ -0.3
CLDN11-208ENST00000488989 Q3ZCU0 254 aa13.15□□□□□ -0.3
CLDN11-208ENST00000488989 PLA1AQ53H76 456 aa13.15□□□□□ -0.3
CLDN11-208ENST00000488989 OR52L2PQ8NGH6 319 aa13.15□□□□□ -0.3
CLDN11-208ENST00000488989 OR13C8Q8NGS7 320 aa13.15□□□□□ -0.3
CLDN11-208ENST00000488989 OR6F1Q8NGZ6 308 aa13.15□□□□□ -0.3
CLDN11-208ENST00000488989 FAM216AQ8WUB2 273 aa13.15□□□□□ -0.3
CLDN11-208ENST00000488989 IL1F10Q8WWZ1 152 aa13.15□□□□□ -0.3
CLDN11-208ENST00000488989 YPEL2Q96QA6 119 aa13.15□□□□□ -0.3
CLDN11-208ENST00000488989 SLC23A1Q9UHI7 598 aa13.15□□□□□ -0.3
CLDN11-208ENST00000488989 A0A087X0M5 115 aa13.14□□□□□ -0.31
CLDN11-208ENST00000488989 A0A1B0GX30 115 aa13.14□□□□□ -0.31
CLDN11-208ENST00000488989 RNF223E7ERA6 249 aa13.14□□□□□ -0.31
CLDN11-208ENST00000488989 ITGB1BP1O14713 200 aa13.14□□□□□ -0.31
CLDN11-208ENST00000488989 OMGP23515 440 aa13.14□□□□□ -0.31
CLDN11-208ENST00000488989 AADACL3Q5VUY0 350 aa13.14□□□□□ -0.31
CLDN11-208ENST00000488989 NRARPQ7Z6K4 114 aa13.14□□□□□ -0.31
CLDN11-208ENST00000488989 WFDC11Q8NEX6 87 aa13.14□□□□□ -0.31
CLDN11-208ENST00000488989 TERB2Q8NHR7 220 aa13.14□□□□□ -0.31
CLDN11-208ENST00000488989 MRGPRFQ96AM1 343 aa13.14□□□□□ -0.31
CLDN11-208ENST00000488989 MOB3AQ96BX8 217 aa13.14□□□□□ -0.31
CLDN11-208ENST00000488989 GINS4Q9BRT9 223 aa13.14□□□□□ -0.31
CLDN11-208ENST00000488989 ZNF2Q9BSG1 426 aaPredicted RBP13.14□□□□□ -0.31
CLDN11-208ENST00000488989 DPAGT1Q9H3H5 408 aa13.14□□□□□ -0.31
CLDN11-208ENST00000488989 OCEL1Q9H607 264 aa13.14□□□□□ -0.31
CLDN11-208ENST00000488989 UNKLQ9H9P5 680 aaKnown RBP13.14□□□□□ -0.31
CLDN11-208ENST00000488989 OR2S2Q9NQN1 319 aa13.14□□□□□ -0.31
CLDN11-208ENST00000488989 MMP26Q9NRE1 261 aa13.14□□□□□ -0.31
CLDN11-208ENST00000488989 COPZ2Q9P299 210 aa13.14□□□□□ -0.31
CLDN11-208ENST00000488989 ZNF69Q9UC07 566 aa13.14□□□□□ -0.31
CLDN11-208ENST00000488989 KPTNQ9Y664 436 aa13.14□□□□□ -0.31
CLDN11-208ENST00000488989 FAM240BA0A1B0GVZ2 78 aa13.13□□□□□ -0.31
CLDN11-208ENST00000488989 B4DSR2 109 aa13.13□□□□□ -0.31
CLDN11-208ENST00000488989 HSPA12AO43301 675 aa13.13□□□□□ -0.31
CLDN11-208ENST00000488989 PPYP01298 95 aa13.13□□□□□ -0.31
CLDN11-208ENST00000488989 IGHV1-8P0DP01 117 aa13.13□□□□□ -0.31
CLDN11-208ENST00000488989 AADACP22760 399 aa13.13□□□□□ -0.31
CLDN11-208ENST00000488989 NFYAP23511 347 aaPredicted RBP13.13□□□□□ -0.31
CLDN11-208ENST00000488989 CD34P28906 385 aa13.13□□□□□ -0.31
CLDN11-208ENST00000488989 CEACAM6P40199 344 aa13.13□□□□□ -0.31
CLDN11-208ENST00000488989 CCR6P51684 374 aa13.13□□□□□ -0.31
CLDN11-208ENST00000488989 UCP3P55916 312 aa13.13□□□□□ -0.31
CLDN11-208ENST00000488989 GNMTQ14749 295 aa13.13□□□□□ -0.31
CLDN11-208ENST00000488989 OXA1LQ15070 435 aa13.13□□□□□ -0.31
CLDN11-208ENST00000488989 MORN2Q502X0 79 aa13.13□□□□□ -0.31
CLDN11-208ENST00000488989 PRAMEF5Q5TYX0 476 aa13.13□□□□□ -0.31
CLDN11-208ENST00000488989 IDO2Q6ZQW0 420 aa13.13□□□□□ -0.31
CLDN11-208ENST00000488989 Q8N7P7 452 aa13.13□□□□□ -0.31
CLDN11-208ENST00000488989 CHPT1Q8WUD6 406 aa13.13□□□□□ -0.31
CLDN11-208ENST00000488989 SLC25A21Q9BQT8 299 aaPredicted RBP13.13□□□□□ -0.31
CLDN11-208ENST00000488989 RDH8Q9NYR8 311 aa13.13□□□□□ -0.31
CLDN11-208ENST00000488989 OR2W1Q9Y3N9 320 aa13.13□□□□□ -0.31
CLDN11-208ENST00000488989 INSIG2Q9Y5U4 225 aa13.13□□□□□ -0.31
CLDN11-208ENST00000488989 SESN1Q9Y6P5 492 aa13.13□□□□□ -0.31
CLDN11-208ENST00000488989 MAP1AP78559 2803 aaPredicted RBP13.12□□□□□ -0.31
CLDN11-208ENST00000488989 IGHV3-43A0A0B4J1X8 118 aa13.12□□□□□ -0.31
CLDN11-208ENST00000488989 hCG_1809904A0A1W2PP81 198 aa13.12□□□□□ -0.31
CLDN11-208ENST00000488989 A0A1W2PPE2 198 aa13.12□□□□□ -0.31
CLDN11-208ENST00000488989 A0A1W2PR64 198 aa13.12□□□□□ -0.31
CLDN11-208ENST00000488989 A0A1W2PRV1 198 aa13.12□□□□□ -0.31
CLDN11-208ENST00000488989 OR5H14A6NHG9 310 aa13.12□□□□□ -0.31
CLDN11-208ENST00000488989 RGS11O94810 467 aa13.12□□□□□ -0.31
CLDN11-208ENST00000488989 NDUFB6O95139 128 aa13.12□□□□□ -0.31
CLDN11-208ENST00000488989 MSMBP08118 114 aa13.12□□□□□ -0.31
CLDN11-208ENST00000488989 IGHV3-43DP0DP04 118 aa13.12□□□□□ -0.31
CLDN11-208ENST00000488989 PPP1CCP36873 323 aaKnown RBP13.12□□□□□ -0.31
CLDN11-208ENST00000488989 ECI1P42126 302 aa13.12□□□□□ -0.31
CLDN11-208ENST00000488989 ERVFRD-1P60508 538 aa13.12□□□□□ -0.31
CLDN11-208ENST00000488989 RBMS2Q15434 407 aaKnown RBP13.12□□□□□ -0.31
CLDN11-208ENST00000488989 SCGB2B2Q4G0G5 96 aa13.12□□□□□ -0.31
CLDN11-208ENST00000488989 FAM53AQ6NSI3 398 aaPredicted RBP13.12□□□□□ -0.31
CLDN11-208ENST00000488989 C8orf31Q8N9H6 132 aa13.12□□□□□ -0.31
CLDN11-208ENST00000488989 MINDY2Q8NBR6 621 aa13.12□□□□□ -0.31
CLDN11-208ENST00000488989 ZNF439Q8NDP4 499 aa13.12□□□□□ -0.31
CLDN11-208ENST00000488989 ZNF596Q8TC21 504 aa13.12□□□□□ -0.31
CLDN11-208ENST00000488989 ENKURQ8TC29 256 aa13.12□□□□□ -0.31
CLDN11-208ENST00000488989 TMPRSS13Q9BYE2 586 aa13.12□□□□□ -0.31
CLDN11-208ENST00000488989 FXYD6Q9H0Q3 95 aa13.12□□□□□ -0.31
CLDN11-208ENST00000488989 GNG12Q9UBI6 72 aa13.12□□□□□ -0.31
CLDN11-208ENST00000488989 CREBBPQ92793 2442 aa13.12□□□□□ -0.31
CLDN11-208ENST00000488989 CSMD1Q96PZ7 3565 aa13.12□□□□□ -0.31
CLDN11-208ENST00000488989 TCRBP04435 133 aa13.11□□□□□ -0.31
CLDN11-208ENST00000488989 MMP9P14780 707 aa13.11□□□□□ -0.31
CLDN11-208ENST00000488989 PRTN3P24158 256 aa13.11□□□□□ -0.31
CLDN11-208ENST00000488989 DVL1P1P54792 670 aaPredicted RBP13.11□□□□□ -0.31
CLDN11-208ENST00000488989 ARF6P62330 175 aa13.11□□□□□ -0.31
CLDN11-208ENST00000488989 PAX8Q06710 450 aa13.11□□□□□ -0.31
CLDN11-208ENST00000488989 SURF2Q15527 256 aaPredicted RBP13.11□□□□□ -0.31
CLDN11-208ENST00000488989 LTC4SQ16873 150 aa13.11□□□□□ -0.31
CLDN11-208ENST00000488989 BTNL3Q6UXE8 466 aa13.11□□□□□ -0.31
CLDN11-208ENST00000488989 LDLRAD3Q86YD5 345 aa13.11□□□□□ -0.31
CLDN11-208ENST00000488989 ZDHHC22Q8N966 263 aa13.11□□□□□ -0.31
CLDN11-208ENST00000488989 LINC01356Q8N9X3 169 aa13.11□□□□□ -0.31
CLDN11-208ENST00000488989 EDARADDQ8WWZ3 215 aa13.11□□□□□ -0.31
CLDN11-208ENST00000488989 PARP12Q9H0J9 701 aaKnown RBP13.11□□□□□ -0.31
CLDN11-208ENST00000488989 SIRPDQ9H106 197 aa13.11□□□□□ -0.31
CLDN11-208ENST00000488989 ONECUT1Q9UBC0 465 aa13.11□□□□□ -0.31
CLDN11-208ENST00000488989 ITPR3Q14573 2671 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms