RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 ADGRG7Q96K78 797 aa16.69■□□□□ 0.26
HMG20B-213ENST00000488973 GUCD1Q96NT3 240 aa16.69■□□□□ 0.26
HMG20B-213ENST00000488973 C1QTNF5Q9BXJ0 243 aa16.69■□□□□ 0.26
HMG20B-213ENST00000488973 ATXN7O15265 892 aaPredicted RBP16.68■□□□□ 0.26
HMG20B-213ENST00000488973 NXPH3O95157 252 aa16.68■□□□□ 0.26
HMG20B-213ENST00000488973 BCL3P20749 454 aa16.68■□□□□ 0.26
HMG20B-213ENST00000488973 FGF12P61328 243 aa16.68■□□□□ 0.26
HMG20B-213ENST00000488973 RPS18P62269 152 aaKnown RBP16.68■□□□□ 0.26
HMG20B-213ENST00000488973 FBXW9Q5XUX1 488 aa16.68■□□□□ 0.26
HMG20B-213ENST00000488973 SLC25A24Q6NUK1 477 aa16.68■□□□□ 0.26
HMG20B-213ENST00000488973 SAXO1Q8IYX7 474 aa16.68■□□□□ 0.26
HMG20B-213ENST00000488973 CCDC74BQ96LY2 380 aa16.68■□□□□ 0.26
HMG20B-213ENST00000488973 RAB40CQ96S21 281 aa16.68■□□□□ 0.26
HMG20B-213ENST00000488973 RNF150Q9ULK6 438 aa16.68■□□□□ 0.26
HMG20B-213ENST00000488973 TRBV24-1A0A075B6N3 115 aa16.68■□□□□ 0.26
HMG20B-213ENST00000488973 SLC33A1O00400 549 aaPredicted RBP16.68■□□□□ 0.26
HMG20B-213ENST00000488973 PGLYRP1O75594 196 aaPredicted RBP16.68■□□□□ 0.26
HMG20B-213ENST00000488973 IL18BPO95998 194 aa16.68■□□□□ 0.26
HMG20B-213ENST00000488973 CEACAM16Q2WEN9 425 aa16.68■□□□□ 0.26
HMG20B-213ENST00000488973 PDZD11Q5EBL8 140 aa16.68■□□□□ 0.26
HMG20B-213ENST00000488973 MBD3L1Q8WWY6 194 aa16.68■□□□□ 0.26
HMG20B-213ENST00000488973 P2RX4Q99571 388 aa16.68■□□□□ 0.26
HMG20B-213ENST00000488973 PRDM14Q9GZV8 571 aa16.68■□□□□ 0.26
HMG20B-213ENST00000488973 GSX1Q9H4S2 264 aaPredicted RBP16.68■□□□□ 0.26
HMG20B-213ENST00000488973 ATP23Q9Y6H3 246 aa16.68■□□□□ 0.26
HMG20B-213ENST00000488973 HSBP1L1C9JCN9 74 aa16.67■□□□□ 0.26
HMG20B-213ENST00000488973 HNF1AP20823 631 aa16.67■□□□□ 0.26
HMG20B-213ENST00000488973 B3GALT5-AS1P59052 145 aa16.67■□□□□ 0.26
HMG20B-213ENST00000488973 ACSF3Q4G176 576 aaPredicted RBP16.67■□□□□ 0.26
HMG20B-213ENST00000488973 ZNF787Q6DD87 383 aa16.67■□□□□ 0.26
HMG20B-213ENST00000488973 RPRMQ9NS64 109 aa16.67■□□□□ 0.26
HMG20B-213ENST00000488973 SDK2Q58EX2 2172 aa16.67■□□□□ 0.26
HMG20B-213ENST00000488973 F2RP25116 425 aa16.67■□□□□ 0.26
HMG20B-213ENST00000488973 MPV17LQ2QL34 196 aa16.67■□□□□ 0.26
HMG20B-213ENST00000488973 ARSJQ5FYB0 599 aaPredicted RBP16.67■□□□□ 0.26
HMG20B-213ENST00000488973 ZNF295-AS1Q8N0V1 137 aa16.67■□□□□ 0.26
HMG20B-213ENST00000488973 KCNE4Q8WWG9 221 aa16.67■□□□□ 0.26
HMG20B-213ENST00000488973 HIST1H2BLQ99880 126 aa16.67■□□□□ 0.26
HMG20B-213ENST00000488973 SDF2L1Q9HCN8 221 aa16.67■□□□□ 0.26
HMG20B-213ENST00000488973 NCKAP5O14513 1909 aa16.66■□□□□ 0.26
HMG20B-213ENST00000488973 IGKV1-6A0A0C4DH72 117 aa16.66■□□□□ 0.26
HMG20B-213ENST00000488973 KIAA1324LA8MWY0 1029 aaPredicted RBP16.66■□□□□ 0.26
HMG20B-213ENST00000488973 OPN1MWP04001 364 aa16.66■□□□□ 0.26
HMG20B-213ENST00000488973 OPN1MW2P0DN77 364 aa16.66■□□□□ 0.26
HMG20B-213ENST00000488973 OPN1MW3P0DN78 364 aa16.66■□□□□ 0.26
HMG20B-213ENST00000488973 COX6A1P12074 109 aa16.66■□□□□ 0.26
HMG20B-213ENST00000488973 S100GP29377 79 aa16.66■□□□□ 0.26
HMG20B-213ENST00000488973 C16orf54Q6UWD8 224 aa16.66■□□□□ 0.26
HMG20B-213ENST00000488973 PSMG3Q9BT73 122 aaPredicted RBP16.66■□□□□ 0.26
HMG20B-213ENST00000488973 CTDSP1Q9GZU7 261 aa16.66■□□□□ 0.26
HMG20B-213ENST00000488973 SIT1Q9Y3P8 196 aa16.66■□□□□ 0.26
HMG20B-213ENST00000488973 ZFP92A6NM28 416 aa16.66■□□□□ 0.26
HMG20B-213ENST00000488973 MMP7P09237 267 aaPredicted RBP16.66■□□□□ 0.26
HMG20B-213ENST00000488973 ZFP36L1Q07352 338 aaKnown RBP16.66■□□□□ 0.26
HMG20B-213ENST00000488973 TRA2AQ13595 282 aaKnown RBP eCLIP16.66■□□□□ 0.266e-7■■□□□ 11.7
HMG20B-213ENST00000488973 ZNF468Q5VIY5 522 aaPredicted RBP16.66■□□□□ 0.26
HMG20B-213ENST00000488973 ZNF573Q86YE8 665 aa16.66■□□□□ 0.26
HMG20B-213ENST00000488973 SCGB1C1Q8TD33 95 aa16.66■□□□□ 0.26
HMG20B-213ENST00000488973 GPR146Q96CH1 333 aa16.66■□□□□ 0.26
HMG20B-213ENST00000488973 ZNF665Q9H7R5 613 aa16.66■□□□□ 0.26
HMG20B-213ENST00000488973 GPR35Q9HC97 309 aa16.66■□□□□ 0.26
HMG20B-213ENST00000488973 TNRC6AQ8NDV7 1962 aaKnown RBP16.65■□□□□ 0.26
HMG20B-213ENST00000488973 C19orf67A6NJJ6 358 aa16.65■□□□□ 0.26
HMG20B-213ENST00000488973 COLCA1Q6ZS62 124 aa16.65■□□□□ 0.26
HMG20B-213ENST00000488973 GGNQ86UU5 652 aa16.65■□□□□ 0.26
HMG20B-213ENST00000488973 DUSP23Q9BVJ7 150 aa16.65■□□□□ 0.26
HMG20B-213ENST00000488973 PITPNC1Q9UKF7 332 aa16.65■□□□□ 0.26
HMG20B-213ENST00000488973 A0A0G2JRQ6 117 aa16.65■□□□□ 0.26
HMG20B-213ENST00000488973 H3BP45 60 aa16.65■□□□□ 0.26
HMG20B-213ENST00000488973 TNFSF12O43508 249 aa16.65■□□□□ 0.26
HMG20B-213ENST00000488973 CNOT4O95628 575 aaKnown RBP16.65■□□□□ 0.26
HMG20B-213ENST00000488973 SRD5A2P31213 254 aa16.65■□□□□ 0.26
HMG20B-213ENST00000488973 ERVFC1-1P60608 527 aa16.65■□□□□ 0.26
HMG20B-213ENST00000488973 TMEM267Q0VDI3 215 aaPredicted RBP16.65■□□□□ 0.26
HMG20B-213ENST00000488973 ABLIM2Q6H8Q1 611 aa16.65■□□□□ 0.26
HMG20B-213ENST00000488973 OCIAD1Q9NX40 245 aa16.65■□□□□ 0.26
HMG20B-213ENST00000488973 CACNA1EQ15878 2313 aa16.64■□□□□ 0.25
HMG20B-213ENST00000488973 GCGP01275 180 aa16.64■□□□□ 0.25
HMG20B-213ENST00000488973 UMODP07911 640 aa16.64■□□□□ 0.25
HMG20B-213ENST00000488973 OR3A1P47881 315 aa16.64■□□□□ 0.25
HMG20B-213ENST00000488973 PCSK4Q6UW60 755 aa16.64■□□□□ 0.25
HMG20B-213ENST00000488973 RPS19BP1Q86WX3 136 aaKnown RBP16.64■□□□□ 0.25
HMG20B-213ENST00000488973 RSG1Q9BU20 258 aa16.64■□□□□ 0.25
HMG20B-213ENST00000488973 CDH20Q9HBT6 801 aa16.64■□□□□ 0.25
HMG20B-213ENST00000488973 LRFN1Q9P244 771 aa16.64■□□□□ 0.25
HMG20B-213ENST00000488973 LY6G6EA0A0G2JKS1 128 aa16.64■□□□□ 0.25
HMG20B-213ENST00000488973 HLA-HP01893 362 aa16.64■□□□□ 0.25
HMG20B-213ENST00000488973 WNT2P09544 360 aa16.64■□□□□ 0.25
HMG20B-213ENST00000488973 FGF5P12034 268 aa16.64■□□□□ 0.25
HMG20B-213ENST00000488973 ZNF726P1Q15940 193 aa16.64■□□□□ 0.25
HMG20B-213ENST00000488973 CABLES2Q9BTV7 478 aa16.64■□□□□ 0.25
HMG20B-213ENST00000488973 VAX2Q9UIW0 290 aa16.64■□□□□ 0.25
HMG20B-213ENST00000488973 U3KQA8 63 aa16.64■□□□□ 0.25
HMG20B-213ENST00000488973 CHD3Q12873 2000 aaKnown RBP16.63■□□□□ 0.25
HMG20B-213ENST00000488973 PGA5P0DJD9 388 aa16.63■□□□□ 0.25
HMG20B-213ENST00000488973 SERF2P84101 59 aa16.63■□□□□ 0.25
HMG20B-213ENST00000488973 PRDX4Q13162 271 aa16.63■□□□□ 0.25
HMG20B-213ENST00000488973 ETFRF1Q6IPR1 90 aa16.63■□□□□ 0.25
HMG20B-213ENST00000488973 LCN15Q6UWW0 184 aa16.63■□□□□ 0.25
HMG20B-213ENST00000488973 YRDCQ86U90 279 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms