RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 WNT5BQ9H1J7 359 aa11.7□□□□□ -0.54
COPS7B-221ENST00000488111 CACNA1BQ00975 2339 aa11.7□□□□□ -0.54
COPS7B-221ENST00000488111 MRPL49Q13405 166 aaKnown RBP11.7□□□□□ -0.54
COPS7B-221ENST00000488111 IL13RA2Q14627 380 aa11.7□□□□□ -0.54
COPS7B-221ENST00000488111 NRN1LQ496H8 165 aa11.7□□□□□ -0.54
COPS7B-221ENST00000488111 C5orf24Q7Z6I8 188 aa11.7□□□□□ -0.54
COPS7B-221ENST00000488111 CXorf67Q86X51 503 aaPredicted RBP11.7□□□□□ -0.54
COPS7B-221ENST00000488111 ZNF664Q8N3J9 261 aa11.7□□□□□ -0.54
COPS7B-221ENST00000488111 ST6GALNAC3Q8NDV1 305 aa11.7□□□□□ -0.54
COPS7B-221ENST00000488111 OR14K1Q8NGZ2 314 aa11.7□□□□□ -0.54
COPS7B-221ENST00000488111 URM1Q9BTM9 101 aaKnown RBP11.7□□□□□ -0.54
COPS7B-221ENST00000488111 DECR2Q9NUI1 292 aa11.7□□□□□ -0.54
COPS7B-221ENST00000488111 USP24Q9UPU5 2620 aa11.69□□□□□ -0.54
COPS7B-221ENST00000488111 SYNGR3O43761 229 aa11.69□□□□□ -0.54
COPS7B-221ENST00000488111 HSPB1P04792 205 aaKnown RBP11.69□□□□□ -0.54
COPS7B-221ENST00000488111 GZMBP10144 247 aa11.69□□□□□ -0.54
COPS7B-221ENST00000488111 ZNF20P17024 532 aa11.69□□□□□ -0.54
COPS7B-221ENST00000488111 RND2P52198 227 aa11.69□□□□□ -0.54
COPS7B-221ENST00000488111 ZNF121P58317 390 aaPredicted RBP11.69□□□□□ -0.54
COPS7B-221ENST00000488111 PCBD1P61457 104 aa11.69□□□□□ -0.54
COPS7B-221ENST00000488111 ICAM4Q14773 271 aa11.69□□□□□ -0.54
COPS7B-221ENST00000488111 CHRFAM7AQ494W8 412 aa11.69□□□□□ -0.54
COPS7B-221ENST00000488111 ZNF506Q5JVG8 444 aa11.69□□□□□ -0.54
COPS7B-221ENST00000488111 ZNF474Q6S9Z5 364 aaPredicted RBP11.69□□□□□ -0.54
COPS7B-221ENST00000488111 CPEB3Q8NE35 698 aaKnown RBP11.69□□□□□ -0.54
COPS7B-221ENST00000488111 ACTR3CQ9C0K3 210 aaPredicted RBP11.69□□□□□ -0.54
COPS7B-221ENST00000488111 OR10A2Q9H208 303 aa11.69□□□□□ -0.54
COPS7B-221ENST00000488111 PITPNC1Q9UKF7 332 aa11.69□□□□□ -0.54
COPS7B-221ENST00000488111 COL6A6A6NMZ7 2263 aa11.69□□□□□ -0.54
COPS7B-221ENST00000488111 INTS1Q8N201 2190 aaKnown RBP11.69□□□□□ -0.54
COPS7B-221ENST00000488111 RTTNQ86VV8 2226 aa11.69□□□□□ -0.54
COPS7B-221ENST00000488111 C5orf63A6NC05 138 aa11.69□□□□□ -0.54
COPS7B-221ENST00000488111 XRCC2O43543 280 aa11.69□□□□□ -0.54
COPS7B-221ENST00000488111 CRTAPO75718 401 aaPredicted RBP11.69□□□□□ -0.54
COPS7B-221ENST00000488111 SCAF4O95104 1147 aaKnown RBP11.69□□□□□ -0.54
COPS7B-221ENST00000488111 HCKP08631 526 aa11.69□□□□□ -0.54
COPS7B-221ENST00000488111 CCL2P13500 99 aa11.69□□□□□ -0.54
COPS7B-221ENST00000488111 GRB2P62993 217 aaKnown RBP11.69□□□□□ -0.54
COPS7B-221ENST00000488111 TGFBR3Q03167 851 aa11.69□□□□□ -0.54
COPS7B-221ENST00000488111 RAB35Q15286 201 aa11.69□□□□□ -0.54
COPS7B-221ENST00000488111 C1orf87Q8N0U7 546 aa11.69□□□□□ -0.54
COPS7B-221ENST00000488111 OR1F12Q8NHA8 337 aa11.69□□□□□ -0.54
COPS7B-221ENST00000488111 NIPSNAP3BQ9BS92 247 aa11.69□□□□□ -0.54
COPS7B-221ENST00000488111 SFXN3Q9BWM7 321 aa11.69□□□□□ -0.54
COPS7B-221ENST00000488111 ZNF319Q9P2F9 582 aa11.69□□□□□ -0.54
COPS7B-221ENST00000488111 KALRNO60229 2985 aa11.68□□□□□ -0.54
COPS7B-221ENST00000488111 B4DEV8 164 aa11.68□□□□□ -0.54
COPS7B-221ENST00000488111 E9PLN8 166 aa11.68□□□□□ -0.54
COPS7B-221ENST00000488111 TNFRSF9Q07011 255 aa11.68□□□□□ -0.54
COPS7B-221ENST00000488111 GABRA6Q16445 453 aa11.68□□□□□ -0.54
COPS7B-221ENST00000488111 FAM57BQ71RH2 274 aa11.68□□□□□ -0.54
COPS7B-221ENST00000488111 CYB561D1Q8N8Q1 229 aa11.68□□□□□ -0.54
COPS7B-221ENST00000488111 METTL9Q9H1A3 318 aa11.68□□□□□ -0.54
COPS7B-221ENST00000488111 RCL1Q9Y2P8 373 aaKnown RBP11.68□□□□□ -0.54
COPS7B-221ENST00000488111 EREGO14944 169 aa11.68□□□□□ -0.54
COPS7B-221ENST00000488111 CNOT4O95628 575 aaKnown RBP11.68□□□□□ -0.54
COPS7B-221ENST00000488111 DIRAS3O95661 229 aa11.68□□□□□ -0.54
COPS7B-221ENST00000488111 CCNOP22674 350 aa11.68□□□□□ -0.54
COPS7B-221ENST00000488111 TMEM187Q14656 261 aa11.68□□□□□ -0.54
COPS7B-221ENST00000488111 TMEM183AQ8IXX5 376 aa11.68□□□□□ -0.54
COPS7B-221ENST00000488111 SSC4DQ8WTU2 575 aa11.68□□□□□ -0.54
COPS7B-221ENST00000488111 ZNF2Q9BSG1 426 aaPredicted RBP11.68□□□□□ -0.54
COPS7B-221ENST00000488111 ABHD14AQ9BUJ0 271 aa11.68□□□□□ -0.54
COPS7B-221ENST00000488111 PECRQ9BY49 303 aa11.68□□□□□ -0.54
COPS7B-221ENST00000488111 SHANK1Q9Y566 2161 aa11.67□□□□□ -0.54
COPS7B-221ENST00000488111 M0R135 149 aa11.67□□□□□ -0.54
COPS7B-221ENST00000488111 CA11O75493 328 aa11.67□□□□□ -0.54
COPS7B-221ENST00000488111 COX5AP20674 150 aa11.67□□□□□ -0.54
COPS7B-221ENST00000488111 OPRM1P35372 400 aa11.67□□□□□ -0.54
COPS7B-221ENST00000488111 MDP1Q86V88 176 aa11.67□□□□□ -0.54
COPS7B-221ENST00000488111 LRTM2Q8N967 370 aa11.67□□□□□ -0.54
COPS7B-221ENST00000488111 OR51E1Q8TCB6 317 aa11.67□□□□□ -0.54
COPS7B-221ENST00000488111 CA5BP1Q8WTZ4 195 aa11.67□□□□□ -0.54
COPS7B-221ENST00000488111 ZNF799Q96GE5 643 aa11.67□□□□□ -0.54
COPS7B-221ENST00000488111 TMEM242Q9NWH2 141 aa11.67□□□□□ -0.54
COPS7B-221ENST00000488111 HSF4Q9ULV5 492 aa11.67□□□□□ -0.54
COPS7B-221ENST00000488111 WSB1Q9Y6I7 421 aa11.67□□□□□ -0.54
COPS7B-221ENST00000488111 IGKV1D-8A0A087WSZ0 117 aa11.67□□□□□ -0.54
COPS7B-221ENST00000488111 OR6C6A6NF89 314 aa11.67□□□□□ -0.54
COPS7B-221ENST00000488111 PGA5P0DJD9 388 aa11.67□□□□□ -0.54
COPS7B-221ENST00000488111 CRYGSP22914 178 aa11.67□□□□□ -0.54
COPS7B-221ENST00000488111 CA7P43166 264 aa11.67□□□□□ -0.54
COPS7B-221ENST00000488111 CEBPGP53567 150 aa11.67□□□□□ -0.54
COPS7B-221ENST00000488111 UBE2NP61088 152 aaKnown RBP11.67□□□□□ -0.54
COPS7B-221ENST00000488111 HLA-DRB3P79483 266 aa11.67□□□□□ -0.54
COPS7B-221ENST00000488111 OR8B12Q8NGG6 310 aa11.67□□□□□ -0.54
COPS7B-221ENST00000488111 OR51T1Q8NGJ9 327 aa11.67□□□□□ -0.54
COPS7B-221ENST00000488111 OR2G3Q8NGZ4 309 aa11.67□□□□□ -0.54
COPS7B-221ENST00000488111 SPTSSAQ969W0 71 aa11.67□□□□□ -0.54
COPS7B-221ENST00000488111 VKORC1Q9BQB6 163 aa11.67□□□□□ -0.54
COPS7B-221ENST00000488111 CDH20Q9HBT6 801 aa11.67□□□□□ -0.54
COPS7B-221ENST00000488111 SERPINE3A8MV23 424 aa11.66□□□□□ -0.54
COPS7B-221ENST00000488111 CCL21O00585 134 aa11.66□□□□□ -0.54
COPS7B-221ENST00000488111 AGFG2O95081 481 aa11.66□□□□□ -0.54
COPS7B-221ENST00000488111 AMBPP02760 352 aa11.66□□□□□ -0.54
COPS7B-221ENST00000488111 RAB4AP20338 218 aa11.66□□□□□ -0.54
COPS7B-221ENST00000488111 ATP6V0CP27449 155 aa11.66□□□□□ -0.54
COPS7B-221ENST00000488111 EWSR1Q01844 656 aaKnown RBP eCLIP11.66□□□□□ -0.54
COPS7B-221ENST00000488111 OR10G4Q8NGN3 311 aa11.66□□□□□ -0.54
COPS7B-221ENST00000488111 RND1Q92730 232 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms