RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 FAAP24Q9BTP7 215 aa16.28■□□□□ 0.2
HDAC4-209ENST00000487617 IGHV3-72A0A0B4J1Y9 119 aa16.27■□□□□ 0.2
HDAC4-209ENST00000487617 ARSBP15848 533 aa16.27■□□□□ 0.2
HDAC4-209ENST00000487617 BLVRBP30043 206 aaPredicted RBP16.27■□□□□ 0.2
HDAC4-209ENST00000487617 DEFA6Q01524 100 aa16.27■□□□□ 0.2
HDAC4-209ENST00000487617 RAB11BQ15907 218 aa16.27■□□□□ 0.2
HDAC4-209ENST00000487617 SLC25A48Q6ZT89 311 aaKnown RBP16.27■□□□□ 0.2
HDAC4-209ENST00000487617 CENPVQ7Z7K6 275 aaPredicted RBP16.27■□□□□ 0.2
HDAC4-209ENST00000487617 ZNF554Q86TJ5 538 aa16.27■□□□□ 0.2
HDAC4-209ENST00000487617 NDUFA11Q86Y39 141 aa16.27■□□□□ 0.2
HDAC4-209ENST00000487617 ZNF439Q8NDP4 499 aa16.27■□□□□ 0.2
HDAC4-209ENST00000487617 OR5AU1Q8NGC0 362 aa16.27■□□□□ 0.2
HDAC4-209ENST00000487617 Q9H521 79 aa16.27■□□□□ 0.2
HDAC4-209ENST00000487617 OR2S2Q9NQN1 319 aa16.27■□□□□ 0.2
HDAC4-209ENST00000487617 WIPF1O43516 503 aa16.26■□□□□ 0.19
HDAC4-209ENST00000487617 GABARAPL2P60520 117 aa16.26■□□□□ 0.19
HDAC4-209ENST00000487617 EMX1Q04741 257 aaPredicted RBP16.26■□□□□ 0.19
HDAC4-209ENST00000487617 SSX1Q16384 188 aa16.26■□□□□ 0.19
HDAC4-209ENST00000487617 CT45A1Q5HYN5 189 aa16.26■□□□□ 0.19
HDAC4-209ENST00000487617 OR2W3Q7Z3T1 314 aa16.26■□□□□ 0.19
HDAC4-209ENST00000487617 CT45A3Q8NHU0 189 aa16.26■□□□□ 0.19
HDAC4-209ENST00000487617 RTN4IP1Q8WWV3 396 aaPredicted RBP16.26■□□□□ 0.19
HDAC4-209ENST00000487617 ST6GALNAC6Q969X2 333 aa16.26■□□□□ 0.19
HDAC4-209ENST00000487617 URM1Q9BTM9 101 aaKnown RBP16.26■□□□□ 0.19
HDAC4-209ENST00000487617 PLEKHJ1Q9NW61 149 aa16.26■□□□□ 0.19
HDAC4-209ENST00000487617 A0A0A6YYD4 124 aa16.25■□□□□ 0.19
HDAC4-209ENST00000487617 KCNAB3O43448 404 aa16.25■□□□□ 0.19
HDAC4-209ENST00000487617 ZNF134P52741 427 aa16.25■□□□□ 0.19
HDAC4-209ENST00000487617 GNMTQ14749 295 aa16.25■□□□□ 0.19
HDAC4-209ENST00000487617 C5orf24Q7Z6I8 188 aa16.25■□□□□ 0.19
HDAC4-209ENST00000487617 OR52L2PQ8NGH6 319 aa16.25■□□□□ 0.19
HDAC4-209ENST00000487617 LPAR5Q9H1C0 372 aa16.25■□□□□ 0.19
HDAC4-209ENST00000487617 CHMP1AQ9HD42 196 aaPredicted RBP16.25■□□□□ 0.19
HDAC4-209ENST00000487617 V9GY05 133 aa16.25■□□□□ 0.19
HDAC4-209ENST00000487617 MRPS14O60783 128 aaKnown RBP16.24■□□□□ 0.19
HDAC4-209ENST00000487617 OPN1MWP04001 364 aa16.24■□□□□ 0.19
HDAC4-209ENST00000487617 OPN1MW2P0DN77 364 aa16.24■□□□□ 0.19
HDAC4-209ENST00000487617 OPN1MW3P0DN78 364 aa16.24■□□□□ 0.19
HDAC4-209ENST00000487617 PSMD7P51665 324 aa16.24■□□□□ 0.19
HDAC4-209ENST00000487617 CLDN12P56749 244 aa16.24■□□□□ 0.19
HDAC4-209ENST00000487617 EBI3Q14213 229 aa16.24■□□□□ 0.19
HDAC4-209ENST00000487617 MORN2Q502X0 79 aa16.24■□□□□ 0.19
HDAC4-209ENST00000487617 IZUMO1Q8IYV9 350 aa16.24■□□□□ 0.19
HDAC4-209ENST00000487617 SVOPQ8N4V2 548 aa16.24■□□□□ 0.19
HDAC4-209ENST00000487617 C5orf56Q8N8D9 126 aa16.24■□□□□ 0.19
HDAC4-209ENST00000487617 OR51D1Q8NGF3 324 aa16.24■□□□□ 0.19
HDAC4-209ENST00000487617 ABRACLQ9P1F3 81 aa16.24■□□□□ 0.19
HDAC4-209ENST00000487617 JPT1Q9UK76 154 aa16.24■□□□□ 0.19
HDAC4-209ENST00000487617 LRRC42Q9Y546 428 aa16.24■□□□□ 0.19
HDAC4-209ENST00000487617 SOCS1O15524 211 aa16.23■□□□□ 0.19
HDAC4-209ENST00000487617 FGF16O43320 207 aa16.23■□□□□ 0.19
HDAC4-209ENST00000487617 PPP1CCP36873 323 aaKnown RBP16.23■□□□□ 0.19
HDAC4-209ENST00000487617 RANBP1P43487 201 aa16.23■□□□□ 0.19
HDAC4-209ENST00000487617 ZNF137PP52743 207 aa16.23■□□□□ 0.19
HDAC4-209ENST00000487617 HTD2P86397 168 aa16.23■□□□□ 0.19
HDAC4-209ENST00000487617 STEAP3Q658P3 488 aa16.23■□□□□ 0.19
HDAC4-209ENST00000487617 TGIF2LXQ8IUE1 241 aa16.23■□□□□ 0.19
HDAC4-209ENST00000487617 OR2T10Q8NGZ9 312 aa16.23■□□□□ 0.19
HDAC4-209ENST00000487617 SETD6Q8TBK2 473 aa16.23■□□□□ 0.19
HDAC4-209ENST00000487617 FAM3DQ96BQ1 224 aa16.23■□□□□ 0.19
HDAC4-209ENST00000487617 GALMQ96C23 342 aa16.23■□□□□ 0.19
HDAC4-209ENST00000487617 EAF1Q96JC9 268 aaPredicted RBP16.23■□□□□ 0.19
HDAC4-209ENST00000487617 NDUFB11Q9NX14 153 aa16.23■□□□□ 0.19
HDAC4-209ENST00000487617 VWFP04275 2813 aa16.23■□□□□ 0.19
HDAC4-209ENST00000487617 MEGF8Q7Z7M0 2845 aa16.23■□□□□ 0.19
HDAC4-209ENST00000487617 A0A1W2PRX2 142 aa16.22■□□□□ 0.19
HDAC4-209ENST00000487617 ADARB2-AS1A8MUL3 147 aa16.22■□□□□ 0.19
HDAC4-209ENST00000487617 PDCD5O14737 125 aa16.22■□□□□ 0.19
HDAC4-209ENST00000487617 TXNL1O43396 289 aa16.22■□□□□ 0.19
HDAC4-209ENST00000487617 DENRO43583 198 aaKnown RBP16.22■□□□□ 0.19
HDAC4-209ENST00000487617 NAPSAO96009 420 aa16.22■□□□□ 0.19
HDAC4-209ENST00000487617 CD1BP29016 333 aa16.22■□□□□ 0.19
HDAC4-209ENST00000487617 CD83Q01151 205 aa16.22■□□□□ 0.19
HDAC4-209ENST00000487617 HMGN3Q15651 99 aa16.22■□□□□ 0.19
HDAC4-209ENST00000487617 C2orf76Q3KRA6 126 aa16.22■□□□□ 0.19
HDAC4-209ENST00000487617 HES5Q5TA89 166 aa16.22■□□□□ 0.19
HDAC4-209ENST00000487617 FAM89BQ8N5H3 189 aa16.22■□□□□ 0.19
HDAC4-209ENST00000487617 OR4F17Q8NGA8 305 aa16.22■□□□□ 0.19
HDAC4-209ENST00000487617 OR4X2Q8NGF9 303 aa16.22■□□□□ 0.19
HDAC4-209ENST00000487617 R3HDM4Q96D70 268 aa16.22■□□□□ 0.19
HDAC4-209ENST00000487617 OR4F4Q96R69 305 aa16.22■□□□□ 0.19
HDAC4-209ENST00000487617 ABHD14AQ9BUJ0 271 aa16.22■□□□□ 0.19
HDAC4-209ENST00000487617 NCBP2LA6PVI3 153 aaKnown RBP16.21■□□□□ 0.19
HDAC4-209ENST00000487617 YPEL1O60688 119 aa16.21■□□□□ 0.19
HDAC4-209ENST00000487617 RGS11O94810 467 aa16.21■□□□□ 0.19
HDAC4-209ENST00000487617 MYL9P24844 172 aa16.21■□□□□ 0.19
HDAC4-209ENST00000487617 CD200R1LQ6Q8B3 271 aa16.21■□□□□ 0.19
HDAC4-209ENST00000487617 C1QL4Q86Z23 238 aa16.21■□□□□ 0.19
HDAC4-209ENST00000487617 IL1F10Q8WWZ1 152 aa16.21■□□□□ 0.19
HDAC4-209ENST00000487617 YPEL2Q96QA6 119 aa16.21■□□□□ 0.19
HDAC4-209ENST00000487617 RIMS4Q9H426 269 aaPredicted RBP16.21■□□□□ 0.19
HDAC4-209ENST00000487617 STEAP1Q9UHE8 339 aa16.21■□□□□ 0.19
HDAC4-209ENST00000487617 AK3Q9UIJ7 227 aa16.21■□□□□ 0.19
HDAC4-209ENST00000487617 TRAV1-2A0A0B4J238 106 aa16.2■□□□□ 0.18
HDAC4-209ENST00000487617 TRDV1A0A1B0GX56 115 aa16.2■□□□□ 0.18
HDAC4-209ENST00000487617 TCRBV4S1A1TA0A5B7 111 aa16.2■□□□□ 0.18
HDAC4-209ENST00000487617 ZNF736B4DX44 427 aaPredicted RBP16.2■□□□□ 0.18
HDAC4-209ENST00000487617 LANCL1O43813 399 aa16.2■□□□□ 0.18
HDAC4-209ENST00000487617 MOSP00540 346 aa16.2■□□□□ 0.18
HDAC4-209ENST00000487617 VEGFCP49767 419 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms