RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 CENPVQ7Z7K6 275 aaPredicted RBP10.28□□□□□ -0.76
CHMP3-208ENST00000486404 ZNF554Q86TJ5 538 aa10.28□□□□□ -0.76
CHMP3-208ENST00000486404 NDUFA11Q86Y39 141 aa10.28□□□□□ -0.76
CHMP3-208ENST00000486404 THNSL2Q86YJ6 484 aa10.28□□□□□ -0.76
CHMP3-208ENST00000486404 TGIF2LXQ8IUE1 241 aa10.28□□□□□ -0.76
CHMP3-208ENST00000486404 IZUMO1Q8IYV9 350 aa10.28□□□□□ -0.76
CHMP3-208ENST00000486404 GAPTQ8N292 157 aa10.28□□□□□ -0.76
CHMP3-208ENST00000486404 OR4F17Q8NGA8 305 aa10.28□□□□□ -0.76
CHMP3-208ENST00000486404 OR4X2Q8NGF9 303 aa10.28□□□□□ -0.76
CHMP3-208ENST00000486404 OR4F4Q96R69 305 aa10.28□□□□□ -0.76
CHMP3-208ENST00000486404 SULT4A1Q9BR01 284 aa10.28□□□□□ -0.76
CHMP3-208ENST00000486404 NICN1Q9BSH3 213 aa10.28□□□□□ -0.76
CHMP3-208ENST00000486404 WNT10AQ9GZT5 417 aa10.28□□□□□ -0.76
CHMP3-208ENST00000486404 OR2S2Q9NQN1 319 aa10.28□□□□□ -0.76
CHMP3-208ENST00000486404 PLEKHJ1Q9NW61 149 aa10.28□□□□□ -0.76
CHMP3-208ENST00000486404 AK6Q9Y3D8 172 aaKnown RBP10.28□□□□□ -0.76
CHMP3-208ENST00000486404 IGHV3-72A0A0B4J1Y9 119 aa10.27□□□□□ -0.77
CHMP3-208ENST00000486404 A0A1W2PRX2 142 aa10.27□□□□□ -0.77
CHMP3-208ENST00000486404 TMEM14DPA8MWL7 114 aa10.27□□□□□ -0.77
CHMP3-208ENST00000486404 PDCD5O14737 125 aa10.27□□□□□ -0.77
CHMP3-208ENST00000486404 SLC31A2O15432 143 aa10.27□□□□□ -0.77
CHMP3-208ENST00000486404 RGS11O94810 467 aa10.27□□□□□ -0.77
CHMP3-208ENST00000486404 BLVRBP30043 206 aaPredicted RBP10.27□□□□□ -0.77
CHMP3-208ENST00000486404 DEFA6Q01524 100 aa10.27□□□□□ -0.77
CHMP3-208ENST00000486404 TMEM91Q6ZNR0 172 aa10.27□□□□□ -0.77
CHMP3-208ENST00000486404 SLC25A48Q6ZT89 311 aaKnown RBP10.27□□□□□ -0.77
CHMP3-208ENST00000486404 C6orf201Q7Z4U5 140 aa10.27□□□□□ -0.77
CHMP3-208ENST00000486404 OR5AU1Q8NGC0 362 aa10.27□□□□□ -0.77
CHMP3-208ENST00000486404 RTN4IP1Q8WWV3 396 aaPredicted RBP10.27□□□□□ -0.77
CHMP3-208ENST00000486404 R3HDM4Q96D70 268 aa10.27□□□□□ -0.77
CHMP3-208ENST00000486404 CITED2Q99967 270 aaPredicted RBP10.27□□□□□ -0.77
CHMP3-208ENST00000486404 ABHD14AQ9BUJ0 271 aa10.27□□□□□ -0.77
CHMP3-208ENST00000486404 TM2D1Q9BX74 207 aa10.27□□□□□ -0.77
CHMP3-208ENST00000486404 MBNL3Q9NUK0 354 aaKnown RBP10.27□□□□□ -0.77
CHMP3-208ENST00000486404 NDUFB11Q9NX14 153 aa10.27□□□□□ -0.77
CHMP3-208ENST00000486404 JPT1Q9UK76 154 aa10.27□□□□□ -0.77
CHMP3-208ENST00000486404 NOTCH1P46531 2555 aa10.26□□□□□ -0.77
CHMP3-208ENST00000486404 FAM90A9PA6NNJ1 464 aa10.26□□□□□ -0.77
CHMP3-208ENST00000486404 NCBP2LA6PVI3 153 aaKnown RBP10.26□□□□□ -0.77
CHMP3-208ENST00000486404 PLXNB1O43157 2135 aa10.26□□□□□ -0.77
CHMP3-208ENST00000486404 FGF16O43320 207 aa10.26□□□□□ -0.77
CHMP3-208ENST00000486404 WIPF1O43516 503 aa10.26□□□□□ -0.77
CHMP3-208ENST00000486404 OPN1MWP04001 364 aa10.26□□□□□ -0.77
CHMP3-208ENST00000486404 OPN1MW2P0DN77 364 aa10.26□□□□□ -0.77
CHMP3-208ENST00000486404 OPN1MW3P0DN78 364 aa10.26□□□□□ -0.77
CHMP3-208ENST00000486404 PF4V1P10720 104 aa10.26□□□□□ -0.77
CHMP3-208ENST00000486404 PPP1CCP36873 323 aaKnown RBP10.26□□□□□ -0.77
CHMP3-208ENST00000486404 PSMD7P51665 324 aa10.26□□□□□ -0.77
CHMP3-208ENST00000486404 EMX1Q04741 257 aaPredicted RBP10.26□□□□□ -0.77
CHMP3-208ENST00000486404 GNMTQ14749 295 aa10.26□□□□□ -0.77
CHMP3-208ENST00000486404 FAM53AQ6NSI3 398 aaPredicted RBP10.26□□□□□ -0.77
CHMP3-208ENST00000486404 C5orf56Q8N8D9 126 aa10.26□□□□□ -0.77
CHMP3-208ENST00000486404 ZNF439Q8NDP4 499 aa10.26□□□□□ -0.77
CHMP3-208ENST00000486404 OR2AK2Q8NG84 335 aa10.26□□□□□ -0.77
CHMP3-208ENST00000486404 OR2T10Q8NGZ9 312 aa10.26□□□□□ -0.77
CHMP3-208ENST00000486404 IL1F10Q8WWZ1 152 aa10.26□□□□□ -0.77
CHMP3-208ENST00000486404 GALMQ96C23 342 aa10.26□□□□□ -0.77
CHMP3-208ENST00000486404 FAAP24Q9BTP7 215 aa10.26□□□□□ -0.77
CHMP3-208ENST00000486404 STEAP1Q9UHE8 339 aa10.26□□□□□ -0.77
CHMP3-208ENST00000486404 TCRBV4S1A1TA0A5B7 111 aa10.25□□□□□ -0.77
CHMP3-208ENST00000486404 PSMB11A5LHX3 300 aa10.25□□□□□ -0.77
CHMP3-208ENST00000486404 MRPS14O60783 128 aaKnown RBP10.25□□□□□ -0.77
CHMP3-208ENST00000486404 AMY1AP04745 511 aa10.25□□□□□ -0.77
CHMP3-208ENST00000486404 AMY2AP04746 511 aa10.25□□□□□ -0.77
CHMP3-208ENST00000486404 PSMB9P28065 219 aa10.25□□□□□ -0.77
CHMP3-208ENST00000486404 CLDN12P56749 244 aa10.25□□□□□ -0.77
CHMP3-208ENST00000486404 MRPS15P82914 257 aaKnown RBP10.25□□□□□ -0.77
CHMP3-208ENST00000486404 SSX1Q16384 188 aa10.25□□□□□ -0.77
CHMP3-208ENST00000486404 HES5Q5TA89 166 aa10.25□□□□□ -0.77
CHMP3-208ENST00000486404 STEAP3Q658P3 488 aa10.25□□□□□ -0.77
CHMP3-208ENST00000486404 FOXRED2Q8IWF2 684 aa10.25□□□□□ -0.77
CHMP3-208ENST00000486404 OR52L2PQ8NGH6 319 aa10.25□□□□□ -0.77
CHMP3-208ENST00000486404 OR56B1Q8NGI3 324 aa10.25□□□□□ -0.77
CHMP3-208ENST00000486404 WIPF2Q8TF74 440 aaPredicted RBP10.25□□□□□ -0.77
CHMP3-208ENST00000486404 FAM3DQ96BQ1 224 aa10.25□□□□□ -0.77
CHMP3-208ENST00000486404 CYYR1Q96J86 154 aa10.25□□□□□ -0.77
CHMP3-208ENST00000486404 GFI1Q99684 422 aa10.25□□□□□ -0.77
CHMP3-208ENST00000486404 LPAR5Q9H1C0 372 aa10.25□□□□□ -0.77
CHMP3-208ENST00000486404 RIMS4Q9H426 269 aaPredicted RBP10.25□□□□□ -0.77
CHMP3-208ENST00000486404 C12orf4Q9NQ89 552 aa10.25□□□□□ -0.77
CHMP3-208ENST00000486404 LRRC42Q9Y546 428 aa10.25□□□□□ -0.77
CHMP3-208ENST00000486404 V9GY05 133 aa10.25□□□□□ -0.77
CHMP3-208ENST00000486404 A0A0A6YYD4 124 aa10.24□□□□□ -0.77
CHMP3-208ENST00000486404 SERPINE3A8MV23 424 aa10.24□□□□□ -0.77
CHMP3-208ENST00000486404 MOSP00540 346 aa10.24□□□□□ -0.77
CHMP3-208ENST00000486404 CD1BP29016 333 aa10.24□□□□□ -0.77
CHMP3-208ENST00000486404 ZNF137PP52743 207 aa10.24□□□□□ -0.77
CHMP3-208ENST00000486404 QRFPP83859 136 aa10.24□□□□□ -0.77
CHMP3-208ENST00000486404 HTD2P86397 168 aa10.24□□□□□ -0.77
CHMP3-208ENST00000486404 HMGN3Q15651 99 aa10.24□□□□□ -0.77
CHMP3-208ENST00000486404 MORN2Q502X0 79 aa10.24□□□□□ -0.77
CHMP3-208ENST00000486404 CT45A1Q5HYN5 189 aa10.24□□□□□ -0.77
CHMP3-208ENST00000486404 SLC35E3Q7Z769 313 aa10.24□□□□□ -0.77
CHMP3-208ENST00000486404 C1QL4Q86Z23 238 aa10.24□□□□□ -0.77
CHMP3-208ENST00000486404 OR51D1Q8NGF3 324 aa10.24□□□□□ -0.77
CHMP3-208ENST00000486404 CT45A3Q8NHU0 189 aa10.24□□□□□ -0.77
CHMP3-208ENST00000486404 FCGR1BQ92637 280 aa10.24□□□□□ -0.77
CHMP3-208ENST00000486404 EAF1Q96JC9 268 aaPredicted RBP10.24□□□□□ -0.77
CHMP3-208ENST00000486404 AK3Q9UIJ7 227 aa10.24□□□□□ -0.77
CHMP3-208ENST00000486404 MGAT4AQ9UM21 535 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms