RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 GPN1Q9HCN4 374 aaPredicted RBP11.92□□□□□ -0.5
COL9A1-207ENST00000486080 OR2S2Q9NQN1 319 aa11.92□□□□□ -0.5
COL9A1-207ENST00000486080 C14orf166Q9Y224 244 aaKnown RBP11.92□□□□□ -0.5
COL9A1-207ENST00000486080 hADV38S2A0JD32 116 aa11.91□□□□□ -0.5
COL9A1-207ENST00000486080 SNRPGP15A8MWD9 76 aa11.91□□□□□ -0.5
COL9A1-207ENST00000486080 CREBL2O60519 120 aaPredicted RBP11.91□□□□□ -0.5
COL9A1-207ENST00000486080 HLA-AP01891 365 aaKnown RBP11.91□□□□□ -0.5
COL9A1-207ENST00000486080 GNRHRP30968 328 aa11.91□□□□□ -0.5
COL9A1-207ENST00000486080 GPR6P46095 362 aaPredicted RBP11.91□□□□□ -0.5
COL9A1-207ENST00000486080 FCN2Q15485 313 aa11.91□□□□□ -0.5
COL9A1-207ENST00000486080 TMEM155Q4W5P6 130 aa11.91□□□□□ -0.5
COL9A1-207ENST00000486080 UTF1Q5T230 341 aa11.91□□□□□ -0.5
COL9A1-207ENST00000486080 TMEM200BQ69YZ2 307 aa11.91□□□□□ -0.5
COL9A1-207ENST00000486080 ZFAND1Q8TCF1 268 aa11.91□□□□□ -0.5
COL9A1-207ENST00000486080 ZNF431Q8TF32 576 aaPredicted RBP11.91□□□□□ -0.5
COL9A1-207ENST00000486080 CORO2AQ92828 525 aa11.91□□□□□ -0.5
COL9A1-207ENST00000486080 RSRP1Q9BUV0 290 aa11.91□□□□□ -0.5
COL9A1-207ENST00000486080 SLC5A7Q9GZV3 580 aa11.91□□□□□ -0.5
COL9A1-207ENST00000486080 OPN4Q9UHM6 478 aa11.91□□□□□ -0.5
COL9A1-207ENST00000486080 KBTBD11-OT1A0A1B0GTJ5 212 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 C9orf170A2RU37 121 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 WNT2P09544 360 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 VAMP1P23763 118 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 LOXL3P58215 753 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 TAS2R31P59538 309 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 ERVFRD-1P60508 538 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 SUPT4H1P63272 117 aaKnown RBP11.9□□□□□ -0.5
COL9A1-207ENST00000486080 HTD2P86397 168 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 DHODHQ02127 395 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 MEF2CQ06413 473 aaPredicted RBP11.9□□□□□ -0.5
COL9A1-207ENST00000486080 TMEM128Q5BJH2 165 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 FAHD2BQ6P2I3 314 aaPredicted RBP11.9□□□□□ -0.5
COL9A1-207ENST00000486080 LYG2Q86SG7 212 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 SLC38A6Q8IZM9 456 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 FAHD2AQ96GK7 314 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 PSMG3-AS1Q96PY0 264 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 CCL28Q9NRJ3 127 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 CLN8Q9UBY8 286 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 MIOXQ9UGB7 285 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 LINC00312Q9Y6C7 94 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 ARHGAP32A7KAX9 2087 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 F2RL2O00254 374 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 HSD17B6O14756 317 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 MMP23AO75900 390 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 IGHV3-7P01780 117 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 OR8U9P0C7N5 309 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 CCL3L1P16619 93 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 PIGPP57054 158 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 KRTAP10-9P60411 292 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 ABCA11PQ4W5N1 156 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 ZNF818PQ6ZRF7 136 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 AKAP14Q86UN6 197 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 FAM185AQ8N0U4 392 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 UXS1Q8NBZ7 420 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 OR11H7Q8NGC8 314 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 OR8U1Q8NH10 309 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 CASTOR1Q8WTX7 329 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 GPHA2Q96T91 129 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 PRR13Q9NZ81 148 aa11.9□□□□□ -0.5
COL9A1-207ENST00000486080 POLQO75417 2590 aa11.9□□□□□ -0.51
COL9A1-207ENST00000486080 BAHCC1Q9P281 2608 aa11.89□□□□□ -0.51
COL9A1-207ENST00000486080 ABCA12Q86UK0 2595 aa11.89□□□□□ -0.51
COL9A1-207ENST00000486080 ZNF729A6NN14 1252 aaPredicted RBP11.89□□□□□ -0.51
COL9A1-207ENST00000486080 CCNKO75909 580 aa11.89□□□□□ -0.51
COL9A1-207ENST00000486080 CXCL3P19876 107 aa11.89□□□□□ -0.51
COL9A1-207ENST00000486080 LUMP51884 338 aaPredicted RBP11.89□□□□□ -0.51
COL9A1-207ENST00000486080 SLC9A3R2Q15599 337 aa11.89□□□□□ -0.51
COL9A1-207ENST00000486080 C2orf68Q2NKX9 166 aa11.89□□□□□ -0.51
COL9A1-207ENST00000486080 PRAMEF5Q5TYX0 476 aa11.89□□□□□ -0.51
COL9A1-207ENST00000486080 CD276Q5ZPR3 534 aa11.89□□□□□ -0.51
COL9A1-207ENST00000486080 ZNF787Q6DD87 383 aa11.89□□□□□ -0.51
COL9A1-207ENST00000486080 HIST2H2BCQ6DN03 193 aa11.89□□□□□ -0.51
COL9A1-207ENST00000486080 SPICQ8N5J4 248 aa11.89□□□□□ -0.51
COL9A1-207ENST00000486080 OR8B3Q8NGG8 313 aa11.89□□□□□ -0.51
COL9A1-207ENST00000486080 NINJ1Q92982 152 aa11.89□□□□□ -0.51
COL9A1-207ENST00000486080 LEAP2Q969E1 77 aa11.89□□□□□ -0.51
COL9A1-207ENST00000486080 NEIL1Q96FI4 390 aaPredicted RBP11.89□□□□□ -0.51
COL9A1-207ENST00000486080 OR8B2Q96RD0 313 aa11.89□□□□□ -0.51
COL9A1-207ENST00000486080 TOLLIPQ9H0E2 274 aa11.89□□□□□ -0.51
COL9A1-207ENST00000486080 SLC2A9Q9NRM0 540 aa11.89□□□□□ -0.51
COL9A1-207ENST00000486080 GNG12Q9UBI6 72 aa11.89□□□□□ -0.51
COL9A1-207ENST00000486080 RNF150Q9ULK6 438 aa11.89□□□□□ -0.51
COL9A1-207ENST00000486080 UBE2J1Q9Y385 318 aaPredicted RBP11.89□□□□□ -0.51
COL9A1-207ENST00000486080 ASH1LQ9NR48 2969 aaKnown RBP11.89□□□□□ -0.51
COL9A1-207ENST00000486080 IGLV2-14P01704 120 aa11.88□□□□□ -0.51
COL9A1-207ENST00000486080 TRAPPC2P0DI81 140 aa11.88□□□□□ -0.51
COL9A1-207ENST00000486080 TRAPPC2BP0DI82 140 aa11.88□□□□□ -0.51
COL9A1-207ENST00000486080 ATP5J2P56134 94 aa11.88□□□□□ -0.51
COL9A1-207ENST00000486080 CD83Q01151 205 aa11.88□□□□□ -0.51
COL9A1-207ENST00000486080 WDR25Q64LD2 544 aaPredicted RBP11.88□□□□□ -0.51
COL9A1-207ENST00000486080 LIN54Q6MZP7 749 aa11.88□□□□□ -0.51
COL9A1-207ENST00000486080 NLRC3Q7RTR2 1065 aa11.88□□□□□ -0.51
COL9A1-207ENST00000486080 ST6GAL2Q96JF0 529 aa11.88□□□□□ -0.51
COL9A1-207ENST00000486080 LINC00574Q9H8X3 128 aa11.88□□□□□ -0.51
COL9A1-207ENST00000486080 PATZ1Q9HBE1 687 aaKnown RBP11.88□□□□□ -0.51
COL9A1-207ENST00000486080 RBM7Q9Y580 266 aaKnown RBP11.88□□□□□ -0.51
COL9A1-207ENST00000486080 ANKRD17O75179 2603 aaKnown RBP11.88□□□□□ -0.51
COL9A1-207ENST00000486080 CRYM-AS1A6NIL9 109 aa11.88□□□□□ -0.51
COL9A1-207ENST00000486080 GPR31O00270 319 aa11.88□□□□□ -0.51
COL9A1-207ENST00000486080 PHF1O43189 567 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms