RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 C10orf99Q6UWK7 81 aa14.05□□□□□ -0.16
COL6A1-204ENST00000486023 OR6M1Q8NGM8 313 aa14.05□□□□□ -0.16
COL6A1-204ENST00000486023 MRPL30Q8TCC3 161 aaKnown RBP14.05□□□□□ -0.16
COL6A1-204ENST00000486023 ISYNA1Q9NPH2 558 aa14.05□□□□□ -0.16
COL6A1-204ENST00000486023 LINC00527Q9UJ94 153 aa14.05□□□□□ -0.16
COL6A1-204ENST00000486023 BLOC1S6Q9UL45 172 aa14.05□□□□□ -0.16
COL6A1-204ENST00000486023 RAB26Q9ULW5 256 aa14.05□□□□□ -0.16
COL6A1-204ENST00000486023 SLC22A1O15245 554 aa14.04□□□□□ -0.16
COL6A1-204ENST00000486023 ARSBP15848 533 aa14.04□□□□□ -0.16
COL6A1-204ENST00000486023 CHATP28329 748 aa14.04□□□□□ -0.16
COL6A1-204ENST00000486023 UNC119Q13432 240 aa14.04□□□□□ -0.16
COL6A1-204ENST00000486023 GNMTQ14749 295 aa14.04□□□□□ -0.16
COL6A1-204ENST00000486023 RAB11BQ15907 218 aa14.04□□□□□ -0.16
COL6A1-204ENST00000486023 CT45A1Q5HYN5 189 aa14.04□□□□□ -0.16
COL6A1-204ENST00000486023 NDUFA11Q86Y39 141 aa14.04□□□□□ -0.16
COL6A1-204ENST00000486023 TGIF2LXQ8IUE1 241 aa14.04□□□□□ -0.16
COL6A1-204ENST00000486023 CT45A3Q8NHU0 189 aa14.04□□□□□ -0.16
COL6A1-204ENST00000486023 IL1F10Q8WWZ1 152 aa14.04□□□□□ -0.16
COL6A1-204ENST00000486023 GFI1Q99684 422 aa14.04□□□□□ -0.16
COL6A1-204ENST00000486023 PLEKHJ1Q9NW61 149 aa14.04□□□□□ -0.16
COL6A1-204ENST00000486023 ZNF736B4DX44 427 aaPredicted RBP14.03□□□□□ -0.16
COL6A1-204ENST00000486023 SOCS1O15524 211 aa14.03□□□□□ -0.16
COL6A1-204ENST00000486023 BPNT1O95861 308 aa14.03□□□□□ -0.16
COL6A1-204ENST00000486023 OPN1MWP04001 364 aa14.03□□□□□ -0.16
COL6A1-204ENST00000486023 OPN1MW2P0DN77 364 aa14.03□□□□□ -0.16
COL6A1-204ENST00000486023 OPN1MW3P0DN78 364 aa14.03□□□□□ -0.16
COL6A1-204ENST00000486023 PSMA1P25786 263 aaKnown RBP14.03□□□□□ -0.16
COL6A1-204ENST00000486023 PPP1CCP36873 323 aaKnown RBP14.03□□□□□ -0.16
COL6A1-204ENST00000486023 ZNF816Q0VGE8 651 aaPredicted RBP14.03□□□□□ -0.16
COL6A1-204ENST00000486023 HES5Q5TA89 166 aa14.03□□□□□ -0.16
COL6A1-204ENST00000486023 ZNF329Q86UD4 541 aa14.03□□□□□ -0.16
COL6A1-204ENST00000486023 GAPTQ8N292 157 aa14.03□□□□□ -0.16
COL6A1-204ENST00000486023 LINC00311Q8N616 119 aa14.03□□□□□ -0.16
COL6A1-204ENST00000486023 WIPF2Q8TF74 440 aaPredicted RBP14.03□□□□□ -0.16
COL6A1-204ENST00000486023 RTN4IP1Q8WWV3 396 aaPredicted RBP14.03□□□□□ -0.16
COL6A1-204ENST00000486023 EAF1Q96JC9 268 aaPredicted RBP14.03□□□□□ -0.16
COL6A1-204ENST00000486023 A0A0A6YYD4 124 aa14.02□□□□□ -0.17
COL6A1-204ENST00000486023 SERPINE3A8MV23 424 aa14.02□□□□□ -0.17
COL6A1-204ENST00000486023 TMEM14DPA8MWL7 114 aa14.02□□□□□ -0.17
COL6A1-204ENST00000486023 G3V4G9 280 aa14.02□□□□□ -0.17
COL6A1-204ENST00000486023 MORN2Q502X0 79 aa14.02□□□□□ -0.17
COL6A1-204ENST00000486023 SLC25A48Q6ZT89 311 aaKnown RBP14.02□□□□□ -0.17
COL6A1-204ENST00000486023 ZNF367Q7RTV3 350 aa14.02□□□□□ -0.17
COL6A1-204ENST00000486023 C5orf56Q8N8D9 126 aa14.02□□□□□ -0.17
COL6A1-204ENST00000486023 ZNF439Q8NDP4 499 aa14.02□□□□□ -0.17
COL6A1-204ENST00000486023 OR4F17Q8NGA8 305 aa14.02□□□□□ -0.17
COL6A1-204ENST00000486023 OR51D1Q8NGF3 324 aa14.02□□□□□ -0.17
COL6A1-204ENST00000486023 OR4X2Q8NGF9 303 aa14.02□□□□□ -0.17
COL6A1-204ENST00000486023 OR2T10Q8NGZ9 312 aa14.02□□□□□ -0.17
COL6A1-204ENST00000486023 NOL4LQ96MY1 436 aaPredicted RBP14.02□□□□□ -0.17
COL6A1-204ENST00000486023 OR4F4Q96R69 305 aa14.02□□□□□ -0.17
COL6A1-204ENST00000486023 URM1Q9BTM9 101 aaKnown RBP14.02□□□□□ -0.17
COL6A1-204ENST00000486023 ACOT13Q9NPJ3 140 aa14.02□□□□□ -0.17
COL6A1-204ENST00000486023 MBNL3Q9NUK0 354 aaKnown RBP14.02□□□□□ -0.17
COL6A1-204ENST00000486023 ABRACLQ9P1F3 81 aa14.02□□□□□ -0.17
COL6A1-204ENST00000486023 SLC17A2O00624 439 aa14.01□□□□□ -0.17
COL6A1-204ENST00000486023 PF4V1P10720 104 aa14.01□□□□□ -0.17
COL6A1-204ENST00000486023 VEGFCP49767 419 aa14.01□□□□□ -0.17
COL6A1-204ENST00000486023 QRFPP83859 136 aa14.01□□□□□ -0.17
COL6A1-204ENST00000486023 CD83Q01151 205 aa14.01□□□□□ -0.17
COL6A1-204ENST00000486023 PDLIM3Q53GG5 364 aaPredicted RBP14.01□□□□□ -0.17
COL6A1-204ENST00000486023 TCTEX1D4Q5JR98 221 aa14.01□□□□□ -0.17
COL6A1-204ENST00000486023 C8orf31Q8N9H6 132 aa14.01□□□□□ -0.17
COL6A1-204ENST00000486023 GALMQ96C23 342 aa14.01□□□□□ -0.17
COL6A1-204ENST00000486023 TM2D1Q9BX74 207 aa14.01□□□□□ -0.17
COL6A1-204ENST00000486023 LPAR5Q9H1C0 372 aa14.01□□□□□ -0.17
COL6A1-204ENST00000486023 PSMB11A5LHX3 300 aa14□□□□□ -0.17
COL6A1-204ENST00000486023 ADARB2-AS1A8MUL3 147 aa14□□□□□ -0.17
COL6A1-204ENST00000486023 TBCEQ15813 527 aaPredicted RBP14□□□□□ -0.17
COL6A1-204ENST00000486023 SSX1Q16384 188 aa14□□□□□ -0.17
COL6A1-204ENST00000486023 C2orf76Q3KRA6 126 aa14□□□□□ -0.17
COL6A1-204ENST00000486023 TMEM30BQ3MIR4 351 aa14□□□□□ -0.17
COL6A1-204ENST00000486023 SLC35E3Q7Z769 313 aa14□□□□□ -0.17
COL6A1-204ENST00000486023 ST6GALNAC6Q969X2 333 aa14□□□□□ -0.17
COL6A1-204ENST00000486023 FAM3DQ96BQ1 224 aa14□□□□□ -0.17
COL6A1-204ENST00000486023 HDHD3Q9BSH5 251 aaPredicted RBP14□□□□□ -0.17
COL6A1-204ENST00000486023 ABHD14AQ9BUJ0 271 aa14□□□□□ -0.17
COL6A1-204ENST00000486023 AK3Q9UIJ7 227 aa14□□□□□ -0.17
COL6A1-204ENST00000486023 V9GY05 133 aa14□□□□□ -0.17
COL6A1-204ENST00000486023 LINC01548A6NM66 108 aa13.99□□□□□ -0.17
COL6A1-204ENST00000486023 MOSP00540 346 aa13.99□□□□□ -0.17
COL6A1-204ENST00000486023 PRB2P02812 416 aaPredicted RBP13.99□□□□□ -0.17
COL6A1-204ENST00000486023 Q3ZCU0 254 aa13.99□□□□□ -0.17
COL6A1-204ENST00000486023 OR2W3Q7Z3T1 314 aa13.99□□□□□ -0.17
COL6A1-204ENST00000486023 Q9H521 79 aa13.99□□□□□ -0.17
COL6A1-204ENST00000486023 JPT1Q9UK76 154 aa13.99□□□□□ -0.17
COL6A1-204ENST00000486023 TSSC4Q9Y5U2 329 aaPredicted RBP13.99□□□□□ -0.17
COL6A1-204ENST00000486023 PDCD5O14737 125 aa13.98□□□□□ -0.17
COL6A1-204ENST00000486023 FGF16O43320 207 aa13.98□□□□□ -0.17
COL6A1-204ENST00000486023 DENRO43583 198 aaKnown RBP13.98□□□□□ -0.17
COL6A1-204ENST00000486023 RGS11O94810 467 aa13.98□□□□□ -0.17
COL6A1-204ENST00000486023 PF4P02776 101 aa13.98□□□□□ -0.17
COL6A1-204ENST00000486023 CD37P11049 281 aa13.98□□□□□ -0.17
COL6A1-204ENST00000486023 MYL9P24844 172 aa13.98□□□□□ -0.17
COL6A1-204ENST00000486023 PSMB9P28065 219 aa13.98□□□□□ -0.17
COL6A1-204ENST00000486023 CD1BP29016 333 aa13.98□□□□□ -0.17
COL6A1-204ENST00000486023 OR3A3P47888 321 aa13.98□□□□□ -0.17
COL6A1-204ENST00000486023 OR10A3P58181 314 aa13.98□□□□□ -0.17
COL6A1-204ENST00000486023 PLA2G7Q13093 441 aa13.98□□□□□ -0.17
COL6A1-204ENST00000486023 OXLD1Q5BKU9 147 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms