RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 RIMS4Q9H426 269 aaPredicted RBP5.58□□□□□ -1.52
VPS50-218ENST00000485994 BANF2Q9H503 90 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 ING3Q9NXR8 418 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 TRAPPC2LQ9UL33 140 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 BLOC1S6Q9UL45 172 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 HSF4Q9ULV5 492 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 TRAV1-2A0A0B4J238 106 aa5.57□□□□□ -1.52
VPS50-218ENST00000485994 IGHV1-3A0A0C4DH29 117 aa5.57□□□□□ -1.52
VPS50-218ENST00000485994 A6NJY4 79 aa5.57□□□□□ -1.52
VPS50-218ENST00000485994 C12orf77C9JDV5 145 aa5.57□□□□□ -1.52
VPS50-218ENST00000485994 SDCBPO00560 298 aaPredicted RBP5.57□□□□□ -1.52
VPS50-218ENST00000485994 SLC17A2O00624 439 aa5.57□□□□□ -1.52
VPS50-218ENST00000485994 ITGB1BP1O14713 200 aa5.57□□□□□ -1.52
VPS50-218ENST00000485994 TXNL1O43396 289 aa5.57□□□□□ -1.52
VPS50-218ENST00000485994 DENRO43583 198 aaKnown RBP5.57□□□□□ -1.52
VPS50-218ENST00000485994 FBXO24O75426 580 aa5.57□□□□□ -1.52
VPS50-218ENST00000485994 NAPSAO96009 420 aa5.57□□□□□ -1.52
VPS50-218ENST00000485994 IGHG2P01859 326 aa5.57□□□□□ -1.52
VPS50-218ENST00000485994 HBZP02008 142 aa5.57□□□□□ -1.52
VPS50-218ENST00000485994 VSIG10L2P0DP72 767 aa5.57□□□□□ -1.52
VPS50-218ENST00000485994 RCC1P18754 421 aaPredicted RBP5.57□□□□□ -1.52
VPS50-218ENST00000485994 IL3RAP26951 378 aa5.57□□□□□ -1.52
VPS50-218ENST00000485994 CHATP28329 748 aa5.57□□□□□ -1.52
VPS50-218ENST00000485994 VDAC2P45880 294 aaPredicted RBP5.57□□□□□ -1.52
VPS50-218ENST00000485994 ZNF134P52741 427 aa5.57□□□□□ -1.52
VPS50-218ENST00000485994 TBCEQ15813 527 aaPredicted RBP5.57□□□□□ -1.52
VPS50-218ENST00000485994 MORN2Q502X0 79 aa5.57□□□□□ -1.52
VPS50-218ENST00000485994 PLA1AQ53H76 456 aa5.57□□□□□ -1.52
VPS50-218ENST00000485994 CT45A1Q5HYN5 189 aa5.57□□□□□ -1.52
VPS50-218ENST00000485994 FAM27D1Q5T7N8 215 aa5.57□□□□□ -1.52
VPS50-218ENST00000485994 LIPKQ5VXJ0 399 aa5.57□□□□□ -1.52
VPS50-218ENST00000485994 IZUMO1Q8IYV9 350 aa5.57□□□□□ -1.52
VPS50-218ENST00000485994 Q8N6K4 173 aa5.57□□□□□ -1.52
VPS50-218ENST00000485994 OR8H1Q8NGG4 311 aa5.57□□□□□ -1.52
VPS50-218ENST00000485994 OR6M1Q8NGM8 313 aa5.57□□□□□ -1.52
VPS50-218ENST00000485994 OR4K15Q8NH41 348 aa5.57□□□□□ -1.52
VPS50-218ENST00000485994 CT45A3Q8NHU0 189 aa5.57□□□□□ -1.52
VPS50-218ENST00000485994 MRPL30Q8TCC3 161 aaKnown RBP5.57□□□□□ -1.52
VPS50-218ENST00000485994 CAPSLQ8WWF8 208 aa5.57□□□□□ -1.52
VPS50-218ENST00000485994 NEDD4LQ96PU5 975 aa5.57□□□□□ -1.52
VPS50-218ENST00000485994 CHCHD6Q9BRQ6 235 aa5.57□□□□□ -1.52
VPS50-218ENST00000485994 TMED9Q9BVK6 235 aa5.57□□□□□ -1.52
VPS50-218ENST00000485994 TMEM59Q9BXS4 323 aa5.57□□□□□ -1.52
VPS50-218ENST00000485994 KRTAP4-2Q9BYR5 136 aa5.57□□□□□ -1.52
VPS50-218ENST00000485994 KCNIP1Q9NZI2 227 aa5.57□□□□□ -1.52
VPS50-218ENST00000485994 MGAT4AQ9UM21 535 aa5.57□□□□□ -1.52
VPS50-218ENST00000485994 TGP01266 2768 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 DNAH3Q8TD57 4116 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 TRAV39A0A0B4J263 110 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 UBE2QL1A1L167 161 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 FAM172BPA6NC97 362 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 FOXI3A8MTJ6 420 aaPredicted RBP5.56□□□□□ -1.52
VPS50-218ENST00000485994 HSD17B6O14756 317 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 LDLRAD4O15165 306 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 LANCL1O43813 399 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 PEX14O75381 377 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 RGS11O94810 467 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 MPIG6BO95866 241 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 LPLP06858 475 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 SNRNP70P08621 437 aaKnown RBP5.56□□□□□ -1.52
VPS50-218ENST00000485994 CD28P10747 220 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 ARSBP15848 533 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 CD24P25063 80 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 TMEM50BP56557 158 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 GABARAPL2P60520 117 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 UNC119Q13432 240 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 DIAPH2-AS1Q14236 149 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 ABCA11PQ4W5N1 156 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 KPRPQ5T749 579 aaPredicted RBP5.56□□□□□ -1.52
VPS50-218ENST00000485994 ZNF367Q7RTV3 350 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 CENPVQ7Z7K6 275 aaPredicted RBP5.56□□□□□ -1.52
VPS50-218ENST00000485994 TGIF2LXQ8IUE1 241 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 DRAM1Q8N682 238 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 C5orf56Q8N8D9 126 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 OR4F17Q8NGA8 305 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 OR5AU1Q8NGC0 362 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 OR10X1Q8NGY0 326 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 OR2T10Q8NGZ9 312 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 NEK7Q8TDX7 302 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 CHPT1Q8WUD6 406 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 CCDC107Q8WV48 283 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 RTN4IP1Q8WWV3 396 aaPredicted RBP5.56□□□□□ -1.52
VPS50-218ENST00000485994 LEAP2Q969E1 77 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 PTX4Q96A99 478 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 GALMQ96C23 342 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 EAF1Q96JC9 268 aaPredicted RBP5.56□□□□□ -1.52
VPS50-218ENST00000485994 OR4F4Q96R69 305 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 GFI1Q99684 422 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 URM1Q9BTM9 101 aaKnown RBP5.56□□□□□ -1.52
VPS50-218ENST00000485994 TOLLIPQ9H0E2 274 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 LPAR5Q9H1C0 372 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 TAF9BQ9HBM6 251 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 PLSCR3Q9NRY6 295 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 ZNF580Q9UK33 172 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 JPT1Q9UK76 154 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 MOB4Q9Y3A3 225 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 TSSC4Q9Y5U2 329 aaPredicted RBP5.56□□□□□ -1.52
VPS50-218ENST00000485994 V9GY05 133 aa5.56□□□□□ -1.52
VPS50-218ENST00000485994 TRDV1A0A1B0GX56 115 aa5.55□□□□□ -1.52
VPS50-218ENST00000485994 PDCD5O14737 125 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms