RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 C8orf31Q8N9H6 132 aa14.7□□□□□ -0.06
COL1A1-206ENST00000485870 URM1Q9BTM9 101 aaKnown RBP14.7□□□□□ -0.06
COL1A1-206ENST00000485870 YTHDF1Q9BYJ9 559 aaKnown RBP14.7□□□□□ -0.06
COL1A1-206ENST00000485870 CHMP1AQ9HD42 196 aaPredicted RBP14.7□□□□□ -0.06
COL1A1-206ENST00000485870 PLEKHJ1Q9NW61 149 aa14.7□□□□□ -0.06
COL1A1-206ENST00000485870 SHISA3A0PJX4 238 aa14.69□□□□□ -0.06
COL1A1-206ENST00000485870 GAPDHP04406 335 aaKnown RBP14.69□□□□□ -0.06
COL1A1-206ENST00000485870 TMEM11P17152 192 aa14.69□□□□□ -0.06
COL1A1-206ENST00000485870 MYL9P24844 172 aa14.69□□□□□ -0.06
COL1A1-206ENST00000485870 IL3RAP26951 378 aa14.69□□□□□ -0.06
COL1A1-206ENST00000485870 ZNF816Q0VGE8 651 aaPredicted RBP14.69□□□□□ -0.06
COL1A1-206ENST00000485870 HNF4GQ14541 408 aa14.69□□□□□ -0.06
COL1A1-206ENST00000485870 GNMTQ14749 295 aa14.69□□□□□ -0.06
COL1A1-206ENST00000485870 Q3ZCU0 254 aa14.69□□□□□ -0.06
COL1A1-206ENST00000485870 CD200R1LQ6Q8B3 271 aa14.69□□□□□ -0.06
COL1A1-206ENST00000485870 SLC25A48Q6ZT89 311 aaKnown RBP14.69□□□□□ -0.06
COL1A1-206ENST00000485870 THNSL2Q86YJ6 484 aa14.69□□□□□ -0.06
COL1A1-206ENST00000485870 ZNF439Q8NDP4 499 aa14.69□□□□□ -0.06
COL1A1-206ENST00000485870 OR52L2PQ8NGH6 319 aa14.69□□□□□ -0.06
COL1A1-206ENST00000485870 FAM3DQ96BQ1 224 aa14.69□□□□□ -0.06
COL1A1-206ENST00000485870 MMP27Q9H306 513 aa14.69□□□□□ -0.06
COL1A1-206ENST00000485870 OR2S2Q9NQN1 319 aa14.69□□□□□ -0.06
COL1A1-206ENST00000485870 MOB4Q9Y3A3 225 aa14.69□□□□□ -0.06
COL1A1-206ENST00000485870 LRRC42Q9Y546 428 aa14.69□□□□□ -0.06
COL1A1-206ENST00000485870 IGHV3-72A0A0B4J1Y9 119 aa14.68□□□□□ -0.06
COL1A1-206ENST00000485870 IGHV1-3A0A0C4DH29 117 aa14.68□□□□□ -0.06
COL1A1-206ENST00000485870 TRDV1A0A1B0GX56 115 aa14.68□□□□□ -0.06
COL1A1-206ENST00000485870 PDCD5O14737 125 aa14.68□□□□□ -0.06
COL1A1-206ENST00000485870 FBXO24O75426 580 aa14.68□□□□□ -0.06
COL1A1-206ENST00000485870 IGKV1D-33P01593 117 aa14.68□□□□□ -0.06
COL1A1-206ENST00000485870 IGKV1-33P01594 117 aa14.68□□□□□ -0.06
COL1A1-206ENST00000485870 AMY1AP04745 511 aa14.68□□□□□ -0.06
COL1A1-206ENST00000485870 AMY2AP04746 511 aa14.68□□□□□ -0.06
COL1A1-206ENST00000485870 LPLP06858 475 aa14.68□□□□□ -0.06
COL1A1-206ENST00000485870 CSF1P09603 554 aa14.68□□□□□ -0.06
COL1A1-206ENST00000485870 CD28P10747 220 aa14.68□□□□□ -0.06
COL1A1-206ENST00000485870 PSMD7P51665 324 aa14.68□□□□□ -0.06
COL1A1-206ENST00000485870 ZNF134P52741 427 aa14.68□□□□□ -0.06
COL1A1-206ENST00000485870 OR10A3P58181 314 aa14.68□□□□□ -0.06
COL1A1-206ENST00000485870 CT45A1Q5HYN5 189 aa14.68□□□□□ -0.06
COL1A1-206ENST00000485870 C9orf152Q5JTZ5 239 aa14.68□□□□□ -0.06
COL1A1-206ENST00000485870 C22orf42Q6IC83 251 aa14.68□□□□□ -0.06
COL1A1-206ENST00000485870 ZNF554Q86TJ5 538 aa14.68□□□□□ -0.06
COL1A1-206ENST00000485870 LYG1Q8N1E2 194 aa14.68□□□□□ -0.06
COL1A1-206ENST00000485870 CT45A3Q8NHU0 189 aa14.68□□□□□ -0.06
COL1A1-206ENST00000485870 FAM110DQ8TAY7 271 aaPredicted RBP14.68□□□□□ -0.06
COL1A1-206ENST00000485870 SETD6Q8TBK2 473 aa14.68□□□□□ -0.06
COL1A1-206ENST00000485870 WNT10AQ9GZT5 417 aa14.68□□□□□ -0.06
COL1A1-206ENST00000485870 STEAP1Q9UHE8 339 aa14.68□□□□□ -0.06
COL1A1-206ENST00000485870 TRAV1-2A0A0B4J238 106 aa14.67□□□□□ -0.06
COL1A1-206ENST00000485870 M0QZK8 103 aa14.67□□□□□ -0.06
COL1A1-206ENST00000485870 PPP1CCP36873 323 aaKnown RBP14.67□□□□□ -0.06
COL1A1-206ENST00000485870 VEGFCP49767 419 aa14.67□□□□□ -0.06
COL1A1-206ENST00000485870 PLA2G7Q13093 441 aa14.67□□□□□ -0.06
COL1A1-206ENST00000485870 C2orf76Q3KRA6 126 aa14.67□□□□□ -0.06
COL1A1-206ENST00000485870 MORN2Q502X0 79 aa14.67□□□□□ -0.06
COL1A1-206ENST00000485870 ZNF773Q6PK81 442 aa14.67□□□□□ -0.06
COL1A1-206ENST00000485870 RTN4IP1Q8WWV3 396 aaPredicted RBP14.67□□□□□ -0.06
COL1A1-206ENST00000485870 FCGR1BQ92637 280 aa14.67□□□□□ -0.06
COL1A1-206ENST00000485870 ST6GALNAC6Q969X2 333 aa14.67□□□□□ -0.06
COL1A1-206ENST00000485870 HDHD3Q9BSH5 251 aaPredicted RBP14.67□□□□□ -0.06
COL1A1-206ENST00000485870 AK3Q9UIJ7 227 aa14.67□□□□□ -0.06
COL1A1-206ENST00000485870 JPT1Q9UK76 154 aa14.67□□□□□ -0.06
COL1A1-206ENST00000485870 TMEM272A0A1B0GTI8 110 aa14.66□□□□□ -0.06
COL1A1-206ENST00000485870 NAPSAO96009 420 aa14.66□□□□□ -0.06
COL1A1-206ENST00000485870 RAB3BP20337 219 aa14.66□□□□□ -0.06
COL1A1-206ENST00000485870 HMGN3Q15651 99 aa14.66□□□□□ -0.06
COL1A1-206ENST00000485870 NSUN5P1Q3KNT7 163 aa14.66□□□□□ -0.06
COL1A1-206ENST00000485870 Q6ZPA2 131 aa14.66□□□□□ -0.06
COL1A1-206ENST00000485870 FAM89BQ8N5H3 189 aa14.66□□□□□ -0.06
COL1A1-206ENST00000485870 WIPF2Q8TF74 440 aaPredicted RBP14.66□□□□□ -0.06
COL1A1-206ENST00000485870 GALMQ96C23 342 aa14.66□□□□□ -0.06
COL1A1-206ENST00000485870 ARHGAP5-AS1Q96IT6 56 aa14.66□□□□□ -0.06
COL1A1-206ENST00000485870 ABRACLQ9P1F3 81 aa14.66□□□□□ -0.06
COL1A1-206ENST00000485870 SMIM30A4D0T7 59 aa14.65□□□□□ -0.06
COL1A1-206ENST00000485870 FOXI3A8MTJ6 420 aaPredicted RBP14.65□□□□□ -0.06
COL1A1-206ENST00000485870 LDLRAD4O15165 306 aa14.65□□□□□ -0.06
COL1A1-206ENST00000485870 GALP22466 123 aa14.65□□□□□ -0.06
COL1A1-206ENST00000485870 RANBP1P43487 201 aa14.65□□□□□ -0.06
COL1A1-206ENST00000485870 TMEM50BP56557 158 aa14.65□□□□□ -0.06
COL1A1-206ENST00000485870 HTD2P86397 168 aa14.65□□□□□ -0.06
COL1A1-206ENST00000485870 TGIF2LXQ8IUE1 241 aa14.65□□□□□ -0.06
COL1A1-206ENST00000485870 OR56B1Q8NGI3 324 aa14.65□□□□□ -0.06
COL1A1-206ENST00000485870 IL1F10Q8WWZ1 152 aa14.65□□□□□ -0.06
COL1A1-206ENST00000485870 ABHD14AQ9BUJ0 271 aa14.65□□□□□ -0.06
COL1A1-206ENST00000485870 PECRQ9BY49 303 aa14.65□□□□□ -0.06
COL1A1-206ENST00000485870 NOTCH1P46531 2555 aa14.65□□□□□ -0.06
COL1A1-206ENST00000485870 MEGF8Q7Z7M0 2845 aa14.65□□□□□ -0.06
COL1A1-206ENST00000485870 IFITM5A6NNB3 132 aa14.64□□□□□ -0.07
COL1A1-206ENST00000485870 ZNF137PP52743 207 aa14.64□□□□□ -0.07
COL1A1-206ENST00000485870 ZNF880Q6PDB4 577 aa14.64□□□□□ -0.07
COL1A1-206ENST00000485870 MOB1BQ7L9L4 216 aa14.64□□□□□ -0.07
COL1A1-206ENST00000485870 CENPVQ7Z7K6 275 aaPredicted RBP14.64□□□□□ -0.07
COL1A1-206ENST00000485870 IZUMO1Q8IYV9 350 aa14.64□□□□□ -0.07
COL1A1-206ENST00000485870 C5orf56Q8N8D9 126 aa14.64□□□□□ -0.07
COL1A1-206ENST00000485870 OR5AU1Q8NGC0 362 aa14.64□□□□□ -0.07
COL1A1-206ENST00000485870 EAF1Q96JC9 268 aaPredicted RBP14.64□□□□□ -0.07
COL1A1-206ENST00000485870 CITED2Q99967 270 aaPredicted RBP14.64□□□□□ -0.07
COL1A1-206ENST00000485870 TXNL4BQ9NX01 149 aaKnown RBP14.64□□□□□ -0.07
COL1A1-206ENST00000485870 RAB22AQ9UL26 194 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms