RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 ZNF345Q14585 488 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 TMEM187Q14656 261 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 HERPUD1Q15011 391 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 HMGN3Q15651 99 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 Q5PR19 223 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 C6orf183Q5T699 404 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 C17orf107Q6ZR85 190 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 ZNF826PQ6ZT77 177 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 LRP11Q86VZ4 500 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 WFDC8Q8IUA0 241 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 CMTM1Q8IZ96 169 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 LGI3Q8N145 548 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 ZNF561Q8N587 486 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 GCSAMQ8N6F7 178 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 ZNF565Q8N9K5 539 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 BVESQ8NE79 360 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 OR11L1Q8NGX0 322 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 CASTOR1Q8WTX7 329 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 LRRC29Q8WV35 223 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 IL22RA2Q969J5 263 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 GALMQ96C23 342 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 SDSLQ96GA7 329 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 CYYR1Q96J86 154 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 C2orf50Q96LR7 162 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 Q96MF0 132 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 TMEM56Q96MV1 263 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 OR2V2Q96R30 315 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 CHIAQ9BZP6 476 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 EGLN1Q9GZT9 426 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 SHARPINQ9H0F6 387 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 FAM234AQ9H0X4 552 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 DNTTIP1Q9H147 329 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 NAA60Q9H7X0 242 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 GCM1Q9NP62 436 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 RAB9BQ9NP90 201 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 KCNJ16Q9NPI9 418 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 SLC2A9Q9NRM0 540 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 FAM212BQ9NTI7 297 aaPredicted RBP4.53□□□□□ -1.68
COL17A1-206ENST00000483876 COMMD9Q9P000 198 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 RNF7Q9UBF6 113 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 TRAPPC2LQ9UL33 140 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 FZR1Q9UM11 496 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 TMED3Q9Y3Q3 217 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 TMEM56-RWDD3S4R434 201 aa4.53□□□□□ -1.68
COL17A1-206ENST00000483876 MGAM2Q2M2H8 2515 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 SONP18583 2426 aaKnown RBP4.52□□□□□ -1.69
COL17A1-206ENST00000483876 CHD3Q12873 2000 aaKnown RBP4.52□□□□□ -1.69
COL17A1-206ENST00000483876 IGKV1D-17A0A075B6S4 117 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 C3orf85A0A1B0GTC6 90 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 hCG_1807616A0A1W2PRN6 198 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 SHISA9B4DS77 424 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 B9A039 149 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 K7N7A8 449 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 L7N2F9 121 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 SIRPB1O00241 398 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 ITGB1BP1O14713 200 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 BET1O15155 118 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 NDUFA2O43678 99 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 PGLYRP1O75594 196 aaPredicted RBP4.52□□□□□ -1.69
COL17A1-206ENST00000483876 OR2F2O95006 317 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 SIX6O95475 246 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 MPC2O95563 127 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 CDS2O95674 445 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 IFNA7P01567 189 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 CD3EP07766 207 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 OR4A8P0C604 315 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 PET100P0DJ07 73 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 CGB3P0DN86 165 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 CGB7P0DN87 165 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 PSG2P11465 335 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 RCC1P18754 421 aaPredicted RBP4.52□□□□□ -1.69
COL17A1-206ENST00000483876 PI3P19957 117 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 S100A11P31949 105 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 OR3A1P47881 315 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 LUMP51884 338 aaPredicted RBP4.52□□□□□ -1.69
COL17A1-206ENST00000483876 HTD2P86397 168 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 COL10A1Q03692 680 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 BAMBIQ13145 260 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 OR2F1Q13607 317 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 OPCMLQ14982 345 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 ANKRD55Q3KP44 614 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 TMEM30BQ3MIR4 351 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 BEX5Q5H9J7 111 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 DCAF12L2Q5VW00 463 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 PRAMEF6Q5VXH4 476 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 TEX36Q5VZQ5 186 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 C11orf87Q6NUJ2 197 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 ADAM5Q6NVV9 412 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 TEX261Q6UWH6 196 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 LIAT1Q6ZQX7 453 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 ACOT7LQ6ZUV0 252 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 ZNF546Q86UE3 836 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 CD177Q8N6Q3 437 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 TCTEX1D1Q8N7M0 179 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 OR5T2Q8NGG2 359 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 ANGPTL6Q8NI99 470 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 THAP6Q8TBB0 222 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 PLPPR1Q8TBJ4 325 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 GLYATL2Q8WU03 294 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 PPP1R1CQ8WVI7 109 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms