RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 HINT2Q9BX68 163 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 THAP10Q9P2Z0 257 aaPredicted RBP6.72□□□□□ -1.33
COL4A5-205ENST00000483338 TRBV7-9A0A0J9YWB2 115 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 TMEM14DPA8MWL7 114 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 SLC33A1O00400 549 aaPredicted RBP6.72□□□□□ -1.33
COL4A5-205ENST00000483338 CA2P00918 260 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 CLEC3BP05452 202 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 CD1BP29016 333 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 SSR2P43308 183 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 FUT6P51993 359 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 RRADP55042 308 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 ZNF154Q13106 437 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 RAB30Q15771 203 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 SUMF1Q8NBK3 374 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 OR10P1Q8NGE3 313 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 MRAP2Q96G30 205 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 KLHDC7BQ96G42 594 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 ARHGAP5-AS1Q96IT6 56 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 FOXN4Q96NZ1 517 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 FAM110AQ9BQ89 295 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 CLEC7AQ9BXN2 247 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 POLR1DQ9Y2S0 133 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 CACNA1IQ9P0X4 2223 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 H0YJW9 148 aa6.71□□□□□ -1.33
COL4A5-205ENST00000483338 PLPP3O14495 311 aa6.71□□□□□ -1.33
COL4A5-205ENST00000483338 CLEC3AO75596 197 aa6.71□□□□□ -1.33
COL4A5-205ENST00000483338 S1PR2O95136 353 aa6.71□□□□□ -1.33
COL4A5-205ENST00000483338 DBIP07108 87 aaKnown RBP6.71□□□□□ -1.33
COL4A5-205ENST00000483338 ZNF728P0DKX0 622 aa6.71□□□□□ -1.33
COL4A5-205ENST00000483338 ZNF20P17024 532 aa6.71□□□□□ -1.33
COL4A5-205ENST00000483338 PLA2G5P39877 138 aa6.71□□□□□ -1.33
COL4A5-205ENST00000483338 SPINT3P49223 89 aa6.71□□□□□ -1.33
COL4A5-205ENST00000483338 PIGPP57054 158 aa6.71□□□□□ -1.33
COL4A5-205ENST00000483338 TAS2R46P59540 309 aa6.71□□□□□ -1.33
COL4A5-205ENST00000483338 POLR2LP62875 67 aaKnown RBP6.71□□□□□ -1.33
COL4A5-205ENST00000483338 RNFT1Q5M7Z0 435 aa6.71□□□□□ -1.33
COL4A5-205ENST00000483338 C9orf135Q5VTT2 229 aa6.71□□□□□ -1.33
COL4A5-205ENST00000483338 BRICD5Q6PL45 260 aa6.71□□□□□ -1.33
COL4A5-205ENST00000483338 MARCH3Q86UD3 253 aa6.71□□□□□ -1.33
COL4A5-205ENST00000483338 OTOSQ8NHW6 89 aa6.71□□□□□ -1.33
COL4A5-205ENST00000483338 MRPL30Q8TCC3 161 aaKnown RBP6.71□□□□□ -1.33
COL4A5-205ENST00000483338 RTN4IP1Q8WWV3 396 aaPredicted RBP6.71□□□□□ -1.33
COL4A5-205ENST00000483338 FER1L6-AS2Q96M78 137 aa6.71□□□□□ -1.33
COL4A5-205ENST00000483338 PELI2Q9HAT8 420 aa6.71□□□□□ -1.33
COL4A5-205ENST00000483338 IGKV1D-8A0A087WSZ0 117 aa6.71□□□□□ -1.34
COL4A5-205ENST00000483338 LINC01553A4QN01 128 aa6.71□□□□□ -1.34
COL4A5-205ENST00000483338 GAGE12HA6NDE8 117 aa6.71□□□□□ -1.34
COL4A5-205ENST00000483338 HIDE1A8MVS5 230 aa6.71□□□□□ -1.34
COL4A5-205ENST00000483338 TMEM250H0YL14 139 aa6.71□□□□□ -1.34
COL4A5-205ENST00000483338 TMEM50AO95807 157 aa6.71□□□□□ -1.34
COL4A5-205ENST00000483338 PPOXP50336 477 aa6.71□□□□□ -1.34
COL4A5-205ENST00000483338 FMODQ06828 376 aa6.71□□□□□ -1.34
COL4A5-205ENST00000483338 ARFRP1Q13795 201 aa6.71□□□□□ -1.34
COL4A5-205ENST00000483338 PMCHL1Q16048 86 aa6.71□□□□□ -1.34
COL4A5-205ENST00000483338 BLNKQ8WV28 456 aa6.71□□□□□ -1.34
COL4A5-205ENST00000483338 GMPPAQ96IJ6 420 aaPredicted RBP6.71□□□□□ -1.34
COL4A5-205ENST00000483338 NPFFR1Q9GZQ6 430 aa6.71□□□□□ -1.34
COL4A5-205ENST00000483338 UBE2ZQ9H832 354 aaPredicted RBP6.71□□□□□ -1.34
COL4A5-205ENST00000483338 CLEC4EQ9ULY5 219 aa6.71□□□□□ -1.34
COL4A5-205ENST00000483338 TSSC4Q9Y5U2 329 aaPredicted RBP6.71□□□□□ -1.34
COL4A5-205ENST00000483338 TEX48A0A1B0GUV7 120 aa6.71□□□□□ -1.34
COL4A5-205ENST00000483338 LOC107986453A0A1B0GWG9 222 aa6.71□□□□□ -1.34
COL4A5-205ENST00000483338 C4orf51C9J302 202 aa6.71□□□□□ -1.34
COL4A5-205ENST00000483338 C17orf112F2Z3M2 114 aa6.71□□□□□ -1.34
COL4A5-205ENST00000483338 SLC31A1O15431 190 aa6.71□□□□□ -1.34
COL4A5-205ENST00000483338 MLNRO43193 412 aa6.71□□□□□ -1.34
COL4A5-205ENST00000483338 LATO43561 262 aa6.71□□□□□ -1.34
COL4A5-205ENST00000483338 SSSCA1O60232 199 aa6.71□□□□□ -1.34
COL4A5-205ENST00000483338 NRASP01111 189 aa6.71□□□□□ -1.34
COL4A5-205ENST00000483338 KRASP01116 189 aa6.71□□□□□ -1.34
COL4A5-205ENST00000483338 IFNA1P01562 189 aa6.71□□□□□ -1.34
COL4A5-205ENST00000483338 STAG3L2P0CL84 134 aa6.71□□□□□ -1.34
COL4A5-205ENST00000483338 ZNF17P17021 662 aa6.71□□□□□ -1.34
COL4A5-205ENST00000483338 ZNF776Q68DI1 518 aaPredicted RBP6.71□□□□□ -1.34
COL4A5-205ENST00000483338 GTF2H5Q6ZYL4 71 aa6.71□□□□□ -1.34
COL4A5-205ENST00000483338 OR5P3Q8WZ94 311 aa6.71□□□□□ -1.34
COL4A5-205ENST00000483338 KCNS1Q96KK3 526 aa6.71□□□□□ -1.34
COL4A5-205ENST00000483338 JMJD8Q96S16 334 aa6.71□□□□□ -1.34
COL4A5-205ENST00000483338 CES1P1Q9UKY3 287 aa6.71□□□□□ -1.34
COL4A5-205ENST00000483338 TMEM14AQ9Y6G1 99 aa6.71□□□□□ -1.34
COL4A5-205ENST00000483338 SCN3AQ9NY46 2000 aa6.71□□□□□ -1.34
COL4A5-205ENST00000483338 TNRC6AQ8NDV7 1962 aaKnown RBP6.71□□□□□ -1.34
COL4A5-205ENST00000483338 FREM3P0C091 2139 aa6.7□□□□□ -1.34
COL4A5-205ENST00000483338 ATG2BQ96BY7 2078 aa6.7□□□□□ -1.34
COL4A5-205ENST00000483338 A0A0G2JMM0 328 aa6.7□□□□□ -1.34
COL4A5-205ENST00000483338 A0A1W2PP11 408 aa6.7□□□□□ -1.34
COL4A5-205ENST00000483338 A0A1W2PPB8 328 aa6.7□□□□□ -1.34
COL4A5-205ENST00000483338 C7orf71A4D174 169 aa6.7□□□□□ -1.34
COL4A5-205ENST00000483338 KIR3DP1A8MWS1 328 aa6.7□□□□□ -1.34
COL4A5-205ENST00000483338 VENTXO95231 258 aa6.7□□□□□ -1.34
COL4A5-205ENST00000483338 BGLAPP02818 100 aa6.7□□□□□ -1.34
COL4A5-205ENST00000483338 FRMD6-AS1P0C7T7 363 aa6.7□□□□□ -1.34
COL4A5-205ENST00000483338 GUCA1AP43080 201 aaPredicted RBP6.7□□□□□ -1.34
COL4A5-205ENST00000483338 ARF3P61204 181 aaPredicted RBP6.7□□□□□ -1.34
COL4A5-205ENST00000483338 RPS4XP62701 263 aaKnown RBP6.7□□□□□ -1.34
COL4A5-205ENST00000483338 TESK1Q15569 626 aa6.7□□□□□ -1.34
COL4A5-205ENST00000483338 SPATA31B1PQ5VZV4 182 aa6.7□□□□□ -1.34
COL4A5-205ENST00000483338 LINC00114Q6XXX2 140 aa6.7□□□□□ -1.34
COL4A5-205ENST00000483338 TDHQ8IZJ6 230 aa6.7□□□□□ -1.34
COL4A5-205ENST00000483338 FAM19A2Q8N3H0 131 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms