RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 IL36GQ9NZH8 169 aa10.82□□□□□ -0.68
VARS-226ENST00000483275 ATP6V0E1O15342 81 aa10.81□□□□□ -0.68
VARS-226ENST00000483275 WBP4O75554 376 aaKnown RBP10.81□□□□□ -0.68
VARS-226ENST00000483275 HBZP02008 142 aa10.81□□□□□ -0.68
VARS-226ENST00000483275 RCC1P18754 421 aaPredicted RBP10.81□□□□□ -0.68
VARS-226ENST00000483275 DCKP27707 260 aa10.81□□□□□ -0.68
VARS-226ENST00000483275 VHLP40337 213 aa10.81□□□□□ -0.68
VARS-226ENST00000483275 ETV1P50549 477 aa10.81□□□□□ -0.68
VARS-226ENST00000483275 PPP3R1P63098 170 aa10.81□□□□□ -0.68
VARS-226ENST00000483275 LSAMPQ13449 338 aa10.81□□□□□ -0.68
VARS-226ENST00000483275 KIAA0141Q14154 515 aaPredicted RBP10.81□□□□□ -0.68
VARS-226ENST00000483275 SYT6Q5T7P8 510 aaPredicted RBP10.81□□□□□ -0.68
VARS-226ENST00000483275 TMPRSS11AQ6ZMR5 421 aa10.81□□□□□ -0.68
VARS-226ENST00000483275 ZFP41Q8N8Y5 198 aa10.81□□□□□ -0.68
VARS-226ENST00000483275 OR52M1Q8NGK5 317 aa10.81□□□□□ -0.68
VARS-226ENST00000483275 MUC7Q8TAX7 377 aa10.81□□□□□ -0.68
VARS-226ENST00000483275 GPR148Q8TDV2 347 aa10.81□□□□□ -0.68
VARS-226ENST00000483275 RCHY1Q96PM5 261 aa10.81□□□□□ -0.68
VARS-226ENST00000483275 ZNF184Q99676 751 aaPredicted RBP10.81□□□□□ -0.68
VARS-226ENST00000483275 FGF20Q9NP95 211 aaPredicted RBP10.81□□□□□ -0.68
VARS-226ENST00000483275 TMEM138Q9NPI0 162 aa10.81□□□□□ -0.68
VARS-226ENST00000483275 NKX1-2Q9UD57 310 aaPredicted RBP10.81□□□□□ -0.68
VARS-226ENST00000483275 TRAPPC2LQ9UL33 140 aa10.81□□□□□ -0.68
VARS-226ENST00000483275 EXOSC1Q9Y3B2 195 aaKnown RBP10.81□□□□□ -0.68
VARS-226ENST00000483275 SACSQ9NZJ4 4579 aa10.8□□□□□ -0.68
VARS-226ENST00000483275 TRAV8-7A0A075B6U6 113 aa10.8□□□□□ -0.68
VARS-226ENST00000483275 C3orf84H3BNL1 204 aa10.8□□□□□ -0.68
VARS-226ENST00000483275 ORC5O43913 435 aa10.8□□□□□ -0.68
VARS-226ENST00000483275 LALBAP00709 142 aa10.8□□□□□ -0.68
VARS-226ENST00000483275 CD2P06729 351 aa10.8□□□□□ -0.68
VARS-226ENST00000483275 BDKRB2P30411 391 aa10.8□□□□□ -0.68
VARS-226ENST00000483275 SLURP1P55000 103 aa10.8□□□□□ -0.68
VARS-226ENST00000483275 ZNF616Q08AN1 781 aa10.8□□□□□ -0.68
VARS-226ENST00000483275 CASC10Q5T4H9 136 aa10.8□□□□□ -0.68
VARS-226ENST00000483275 HAPLN4Q86UW8 402 aa10.8□□□□□ -0.68
VARS-226ENST00000483275 ZNF491Q8N8L2 437 aa10.8□□□□□ -0.68
VARS-226ENST00000483275 C8orf31Q8N9H6 132 aa10.8□□□□□ -0.68
VARS-226ENST00000483275 OR1N2Q8NGR9 330 aa10.8□□□□□ -0.68
VARS-226ENST00000483275 MYOZ3Q8TDC0 251 aa10.8□□□□□ -0.68
VARS-226ENST00000483275 DCUN1D4Q92564 292 aa10.8□□□□□ -0.68
VARS-226ENST00000483275 MUL1Q969V5 352 aa10.8□□□□□ -0.68
VARS-226ENST00000483275 TMEM80Q96HE8 168 aa10.8□□□□□ -0.68
VARS-226ENST00000483275 S100A13Q99584 98 aa10.8□□□□□ -0.68
VARS-226ENST00000483275 BANF2Q9H503 90 aa10.8□□□□□ -0.68
VARS-226ENST00000483275 ETAA1Q9NY74 926 aa10.8□□□□□ -0.68
VARS-226ENST00000483275 SMAD5-AS1Q9Y6J3 95 aa10.8□□□□□ -0.68
VARS-226ENST00000483275 A0A1W2PPK0 400 aa10.79□□□□□ -0.68
VARS-226ENST00000483275 UBE2QL1A1L167 161 aa10.79□□□□□ -0.68
VARS-226ENST00000483275 I3L521 148 aa10.79□□□□□ -0.68
VARS-226ENST00000483275 SPINT2O43291 252 aa10.79□□□□□ -0.68
VARS-226ENST00000483275 SAP30O75446 220 aa10.79□□□□□ -0.68
VARS-226ENST00000483275 IGF1P05019 195 aa10.79□□□□□ -0.68
VARS-226ENST00000483275 OR8U8P0C7N1 319 aa10.79□□□□□ -0.68
VARS-226ENST00000483275 CHATP28329 748 aa10.79□□□□□ -0.68
VARS-226ENST00000483275 BLVRBP30043 206 aaPredicted RBP10.79□□□□□ -0.68
VARS-226ENST00000483275 PPP1CCP36873 323 aaKnown RBP10.79□□□□□ -0.68
VARS-226ENST00000483275 OR3A3P47888 321 aa10.79□□□□□ -0.68
VARS-226ENST00000483275 ZNF137PP52743 207 aa10.79□□□□□ -0.68
VARS-226ENST00000483275 ACTBP60709 375 aa10.79□□□□□ -0.68
VARS-226ENST00000483275 NDPQ00604 133 aa10.79□□□□□ -0.68
VARS-226ENST00000483275 RIPK1Q13546 671 aa10.79□□□□□ -0.68
VARS-226ENST00000483275 MPV17LQ2QL34 196 aa10.79□□□□□ -0.68
VARS-226ENST00000483275 RAB12Q6IQ22 244 aa10.79□□□□□ -0.68
VARS-226ENST00000483275 TMEM65Q6PI78 240 aa10.79□□□□□ -0.68
VARS-226ENST00000483275 LINC00596Q86U02 117 aa10.79□□□□□ -0.68
VARS-226ENST00000483275 STX19Q8N4C7 294 aa10.79□□□□□ -0.68
VARS-226ENST00000483275 OR52L2PQ8NGH6 319 aa10.79□□□□□ -0.68
VARS-226ENST00000483275 PNMA8CA0A1B0GUJ8 204 aa10.78□□□□□ -0.68
VARS-226ENST00000483275 EFCAB10A6NFE3 127 aa10.78□□□□□ -0.68
VARS-226ENST00000483275 TXNL1O43396 289 aa10.78□□□□□ -0.68
VARS-226ENST00000483275 FRMD6-AS1P0C7T7 363 aa10.78□□□□□ -0.68
VARS-226ENST00000483275 GTF2F2P13984 249 aa10.78□□□□□ -0.68
VARS-226ENST00000483275 SNRPBP14678 240 aaKnown RBP10.78□□□□□ -0.68
VARS-226ENST00000483275 SPNP16150 400 aa10.78□□□□□ -0.68
VARS-226ENST00000483275 PPIFP30405 207 aaKnown RBP10.78□□□□□ -0.68
VARS-226ENST00000483275 ECSCRQ19T08 205 aa10.78□□□□□ -0.68
VARS-226ENST00000483275 RPL22L1Q6P5R6 122 aaKnown RBP10.78□□□□□ -0.68
VARS-226ENST00000483275 JAGN1Q8N5M9 183 aa10.78□□□□□ -0.68
VARS-226ENST00000483275 BPIFB6Q8NFQ5 453 aa10.78□□□□□ -0.68
VARS-226ENST00000483275 OR8H1Q8NGG4 311 aa10.78□□□□□ -0.68
VARS-226ENST00000483275 ANKRD60Q9BZ19 345 aa10.78□□□□□ -0.68
VARS-226ENST00000483275 RCC2Q9P258 522 aaKnown RBP10.78□□□□□ -0.68
VARS-226ENST00000483275 CLEC2DQ9UHP7 191 aa10.78□□□□□ -0.68
VARS-226ENST00000483275 DIMT1Q9UNQ2 313 aaKnown RBP10.78□□□□□ -0.68
VARS-226ENST00000483275 VSIG4Q9Y279 399 aa10.78□□□□□ -0.68
VARS-226ENST00000483275 MRPS28Q9Y2Q9 187 aaKnown RBP10.78□□□□□ -0.68
VARS-226ENST00000483275 FBXO7Q9Y3I1 522 aa10.78□□□□□ -0.68
VARS-226ENST00000483275 PEX16Q9Y5Y5 336 aa10.78□□□□□ -0.68
VARS-226ENST00000483275 A3GALT2U3KPV4 340 aa10.78□□□□□ -0.68
VARS-226ENST00000483275 EPPK1P58107 5090 aaKnown RBP10.78□□□□□ -0.68
VARS-226ENST00000483275 IGHV7-81A0A0B4J1V7 117 aa10.77□□□□□ -0.69
VARS-226ENST00000483275 TRAV41A0A0B4J266 112 aa10.77□□□□□ -0.69
VARS-226ENST00000483275 TRIM64CA6NLI5 447 aa10.77□□□□□ -0.69
VARS-226ENST00000483275 MCRIP1C9JLW8 97 aa10.77□□□□□ -0.69
VARS-226ENST00000483275 GNAO1P09471 354 aa10.77□□□□□ -0.69
VARS-226ENST00000483275 IGFBP3P17936 291 aaPredicted RBP10.77□□□□□ -0.69
VARS-226ENST00000483275 AQP4P55087 323 aa10.77□□□□□ -0.69
VARS-226ENST00000483275 ZFAND6Q6FIF0 208 aa10.77□□□□□ -0.69
VARS-226ENST00000483275 GLIPR1L1Q6UWM5 242 aa10.77□□□□□ -0.69
VARS-226ENST00000483275 ODF3L1Q8IXM7 274 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms