RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 AK6Q9Y3D8 172 aaKnown RBP11.09□□□□□ -0.63
VARS-225ENST00000482996 TMEM14DPA8MWL7 114 aa11.08□□□□□ -0.64
VARS-225ENST00000482996 SLC17A2O00624 439 aa11.08□□□□□ -0.64
VARS-225ENST00000482996 ARSBP15848 533 aa11.08□□□□□ -0.64
VARS-225ENST00000482996 TMEM11P17152 192 aa11.08□□□□□ -0.64
VARS-225ENST00000482996 PSMD7P51665 324 aa11.08□□□□□ -0.64
VARS-225ENST00000482996 FABP5Q01469 135 aa11.08□□□□□ -0.64
VARS-225ENST00000482996 UNC119Q13432 240 aa11.08□□□□□ -0.64
VARS-225ENST00000482996 DIAPH2-AS1Q14236 149 aa11.08□□□□□ -0.64
VARS-225ENST00000482996 TMEM95Q3KNT9 176 aa11.08□□□□□ -0.64
VARS-225ENST00000482996 C9orf152Q5JTZ5 239 aa11.08□□□□□ -0.64
VARS-225ENST00000482996 UBE2UQ5VVX9 321 aa11.08□□□□□ -0.64
VARS-225ENST00000482996 OR2W3Q7Z3T1 314 aa11.08□□□□□ -0.64
VARS-225ENST00000482996 MOB3BQ86TA1 216 aa11.08□□□□□ -0.64
VARS-225ENST00000482996 MBNL3Q9NUK0 354 aaKnown RBP11.08□□□□□ -0.64
VARS-225ENST00000482996 IGHV1-3A0A0C4DH29 117 aa11.07□□□□□ -0.64
VARS-225ENST00000482996 SMIM31A0A1B0GVY4 71 aa11.07□□□□□ -0.64
VARS-225ENST00000482996 IGKV1D-33P01593 117 aa11.07□□□□□ -0.64
VARS-225ENST00000482996 IGKV1-33P01594 117 aa11.07□□□□□ -0.64
VARS-225ENST00000482996 TFAP2AP05549 437 aa11.07□□□□□ -0.64
VARS-225ENST00000482996 CD28P10747 220 aa11.07□□□□□ -0.64
VARS-225ENST00000482996 BLVRBP30043 206 aaPredicted RBP11.07□□□□□ -0.64
VARS-225ENST00000482996 REG1BP48304 166 aa11.07□□□□□ -0.64
VARS-225ENST00000482996 QRFPP83859 136 aa11.07□□□□□ -0.64
VARS-225ENST00000482996 HNF4GQ14541 408 aa11.07□□□□□ -0.64
VARS-225ENST00000482996 P2RY14Q15391 338 aa11.07□□□□□ -0.64
VARS-225ENST00000482996 NSUN5P1Q3KNT7 163 aa11.07□□□□□ -0.64
VARS-225ENST00000482996 FBLN7Q53RD9 439 aa11.07□□□□□ -0.64
VARS-225ENST00000482996 STEAP3Q658P3 488 aa11.07□□□□□ -0.64
VARS-225ENST00000482996 SLC25A48Q6ZT89 311 aaKnown RBP11.07□□□□□ -0.64
VARS-225ENST00000482996 CENPVQ7Z7K6 275 aaPredicted RBP11.07□□□□□ -0.64
VARS-225ENST00000482996 OR10V1Q8NGI7 309 aa11.07□□□□□ -0.64
VARS-225ENST00000482996 MRPL30Q8TCC3 161 aaKnown RBP11.07□□□□□ -0.64
VARS-225ENST00000482996 SULT4A1Q9BR01 284 aa11.07□□□□□ -0.64
VARS-225ENST00000482996 FAAP24Q9BTP7 215 aa11.07□□□□□ -0.64
VARS-225ENST00000482996 KCNK15Q9H427 330 aa11.07□□□□□ -0.64
VARS-225ENST00000482996 CHMP1AQ9HD42 196 aaPredicted RBP11.07□□□□□ -0.64
VARS-225ENST00000482996 OR2S2Q9NQN1 319 aa11.07□□□□□ -0.64
VARS-225ENST00000482996 PLEKHJ1Q9NW61 149 aa11.07□□□□□ -0.64
VARS-225ENST00000482996 PDCD5O14737 125 aa11.06□□□□□ -0.64
VARS-225ENST00000482996 FGF16O43320 207 aa11.06□□□□□ -0.64
VARS-225ENST00000482996 TXNL1O43396 289 aa11.06□□□□□ -0.64
VARS-225ENST00000482996 RGS11O94810 467 aa11.06□□□□□ -0.64
VARS-225ENST00000482996 AMY1AP04745 511 aa11.06□□□□□ -0.64
VARS-225ENST00000482996 AMY2AP04746 511 aa11.06□□□□□ -0.64
VARS-225ENST00000482996 ALDH3B2P48448 385 aa11.06□□□□□ -0.64
VARS-225ENST00000482996 TIMM50Q3ZCQ8 353 aa11.06□□□□□ -0.64
VARS-225ENST00000482996 HIST2H2BDQ6DRA6 164 aa11.06□□□□□ -0.64
VARS-225ENST00000482996 FAM53AQ6NSI3 398 aaPredicted RBP11.06□□□□□ -0.64
VARS-225ENST00000482996 C6orf201Q7Z4U5 140 aa11.06□□□□□ -0.64
VARS-225ENST00000482996 NDUFA11Q86Y39 141 aa11.06□□□□□ -0.64
VARS-225ENST00000482996 ZNF439Q8NDP4 499 aa11.06□□□□□ -0.64
VARS-225ENST00000482996 OR5AU1Q8NGC0 362 aa11.06□□□□□ -0.64
VARS-225ENST00000482996 WIPF2Q8TF74 440 aaPredicted RBP11.06□□□□□ -0.64
VARS-225ENST00000482996 RTN4IP1Q8WWV3 396 aaPredicted RBP11.06□□□□□ -0.64
VARS-225ENST00000482996 GFI1Q99684 422 aa11.06□□□□□ -0.64
VARS-225ENST00000482996 NICN1Q9BSH3 213 aa11.06□□□□□ -0.64
VARS-225ENST00000482996 ABRACLQ9P1F3 81 aa11.06□□□□□ -0.64
VARS-225ENST00000482996 JPT1Q9UK76 154 aa11.06□□□□□ -0.64
VARS-225ENST00000482996 V9GY05 133 aa11.06□□□□□ -0.64
VARS-225ENST00000482996 SH2D7A6NKC9 451 aaPredicted RBP11.05□□□□□ -0.64
VARS-225ENST00000482996 SLC31A2O15432 143 aa11.05□□□□□ -0.64
VARS-225ENST00000482996 MYL9P24844 172 aa11.05□□□□□ -0.64
VARS-225ENST00000482996 HTD2P86397 168 aa11.05□□□□□ -0.64
VARS-225ENST00000482996 SSX1Q16384 188 aa11.05□□□□□ -0.64
VARS-225ENST00000482996 CT45A1Q5HYN5 189 aa11.05□□□□□ -0.64
VARS-225ENST00000482996 MOB1BQ7L9L4 216 aa11.05□□□□□ -0.64
VARS-225ENST00000482996 TGIF2LXQ8IUE1 241 aa11.05□□□□□ -0.64
VARS-225ENST00000482996 CLVS1Q8IUQ0 354 aaPredicted RBP11.05□□□□□ -0.64
VARS-225ENST00000482996 IZUMO1Q8IYV9 350 aa11.05□□□□□ -0.64
VARS-225ENST00000482996 LYG1Q8N1E2 194 aa11.05□□□□□ -0.64
VARS-225ENST00000482996 OR51D1Q8NGF3 324 aa11.05□□□□□ -0.64
VARS-225ENST00000482996 OR2T10Q8NGZ9 312 aa11.05□□□□□ -0.64
VARS-225ENST00000482996 CT45A3Q8NHU0 189 aa11.05□□□□□ -0.64
VARS-225ENST00000482996 ST6GALNAC6Q969X2 333 aa11.05□□□□□ -0.64
VARS-225ENST00000482996 FAM3DQ96BQ1 224 aa11.05□□□□□ -0.64
VARS-225ENST00000482996 GALMQ96C23 342 aa11.05□□□□□ -0.64
VARS-225ENST00000482996 CITED2Q99967 270 aaPredicted RBP11.05□□□□□ -0.64
VARS-225ENST00000482996 LPAR5Q9H1C0 372 aa11.05□□□□□ -0.64
VARS-225ENST00000482996 RIMS4Q9H426 269 aaPredicted RBP11.05□□□□□ -0.64
VARS-225ENST00000482996 NDUFB11Q9NX14 153 aa11.05□□□□□ -0.64
VARS-225ENST00000482996 NOTCH3Q9UM47 2321 aa11.04□□□□□ -0.64
VARS-225ENST00000482996 A0A0A6YYD4 124 aa11.04□□□□□ -0.64
VARS-225ENST00000482996 IGHV3-72A0A0B4J1Y9 119 aa11.04□□□□□ -0.64
VARS-225ENST00000482996 TRAV1-2A0A0B4J238 106 aa11.04□□□□□ -0.64
VARS-225ENST00000482996 TRDV1A0A1B0GX56 115 aa11.04□□□□□ -0.64
VARS-225ENST00000482996 DPPA5A6NC42 116 aa11.04□□□□□ -0.64
VARS-225ENST00000482996 OPN1MWP04001 364 aa11.04□□□□□ -0.64
VARS-225ENST00000482996 OPN1MW2P0DN77 364 aa11.04□□□□□ -0.64
VARS-225ENST00000482996 OPN1MW3P0DN78 364 aa11.04□□□□□ -0.64
VARS-225ENST00000482996 CD1BP29016 333 aa11.04□□□□□ -0.64
VARS-225ENST00000482996 PPP1CCP36873 323 aaKnown RBP11.04□□□□□ -0.64
VARS-225ENST00000482996 ZNF134P52741 427 aa11.04□□□□□ -0.64
VARS-225ENST00000482996 ZNF137PP52743 207 aa11.04□□□□□ -0.64
VARS-225ENST00000482996 CLDN12P56749 244 aa11.04□□□□□ -0.64
VARS-225ENST00000482996 DEFA6Q01524 100 aa11.04□□□□□ -0.64
VARS-225ENST00000482996 EBI3Q14213 229 aa11.04□□□□□ -0.64
VARS-225ENST00000482996 MORN2Q502X0 79 aa11.04□□□□□ -0.64
VARS-225ENST00000482996 FAM89BQ8N5H3 189 aa11.04□□□□□ -0.64
VARS-225ENST00000482996 C5orf56Q8N8D9 126 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms