RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 CST11Q9H112 138 aa10.6□□□□□ -0.71
CTDSP1-208ENST00000482272 OR2S2Q9NQN1 319 aa10.6□□□□□ -0.71
CTDSP1-208ENST00000482272 ZMAT5Q9UDW3 170 aaKnown RBP10.6□□□□□ -0.71
CTDSP1-208ENST00000482272 UBE2QL1A1L167 161 aa10.59□□□□□ -0.71
CTDSP1-208ENST00000482272 K7EIL1 84 aa10.59□□□□□ -0.71
CTDSP1-208ENST00000482272 SLC31A2O15432 143 aa10.59□□□□□ -0.71
CTDSP1-208ENST00000482272 RRP9O43818 475 aaKnown RBP10.59□□□□□ -0.71
CTDSP1-208ENST00000482272 SC5DO75845 299 aa10.59□□□□□ -0.71
CTDSP1-208ENST00000482272 RCC1P18754 421 aaPredicted RBP10.59□□□□□ -0.71
CTDSP1-208ENST00000482272 KRTAP10-11P60412 298 aa10.59□□□□□ -0.71
CTDSP1-208ENST00000482272 EGFEM1PQ0D2K5 195 aa10.59□□□□□ -0.71
CTDSP1-208ENST00000482272 MORN2Q502X0 79 aa10.59□□□□□ -0.71
CTDSP1-208ENST00000482272 CT45A1Q5HYN5 189 aa10.59□□□□□ -0.71
CTDSP1-208ENST00000482272 OGFRL1Q5TC84 451 aaPredicted RBP10.59□□□□□ -0.71
CTDSP1-208ENST00000482272 ETV3LQ6ZN32 361 aa10.59□□□□□ -0.71
CTDSP1-208ENST00000482272 C18orf65Q6ZTR6 163 aa10.59□□□□□ -0.71
CTDSP1-208ENST00000482272 ZNF554Q86TJ5 538 aa10.59□□□□□ -0.71
CTDSP1-208ENST00000482272 MS4A15Q8N5U1 240 aa10.59□□□□□ -0.71
CTDSP1-208ENST00000482272 ZNF439Q8NDP4 499 aa10.59□□□□□ -0.71
CTDSP1-208ENST00000482272 TMEM104Q8NE00 496 aa10.59□□□□□ -0.71
CTDSP1-208ENST00000482272 OR10V1Q8NGI7 309 aa10.59□□□□□ -0.71
CTDSP1-208ENST00000482272 OR1L1Q8NH94 360 aa10.59□□□□□ -0.71
CTDSP1-208ENST00000482272 CT45A3Q8NHU0 189 aa10.59□□□□□ -0.71
CTDSP1-208ENST00000482272 TAF9BQ9HBM6 251 aa10.59□□□□□ -0.71
CTDSP1-208ENST00000482272 PLSCR3Q9NRY6 295 aa10.59□□□□□ -0.71
CTDSP1-208ENST00000482272 FKBP14Q9NWM8 211 aa10.59□□□□□ -0.71
CTDSP1-208ENST00000482272 LRRC42Q9Y546 428 aa10.59□□□□□ -0.71
CTDSP1-208ENST00000482272 ZNF736B4DX44 427 aaPredicted RBP10.58□□□□□ -0.72
CTDSP1-208ENST00000482272 ELANEP08246 267 aa10.58□□□□□ -0.72
CTDSP1-208ENST00000482272 UBBP0CG47 229 aa10.58□□□□□ -0.72
CTDSP1-208ENST00000482272 HOXD3P31249 432 aaPredicted RBP10.58□□□□□ -0.72
CTDSP1-208ENST00000482272 SOX6P35712 828 aa10.58□□□□□ -0.72
CTDSP1-208ENST00000482272 ZNF137PP52743 207 aa10.58□□□□□ -0.72
CTDSP1-208ENST00000482272 GPR50Q13585 617 aa10.58□□□□□ -0.72
CTDSP1-208ENST00000482272 CXorf66Q5JRM2 361 aaPredicted RBP10.58□□□□□ -0.72
CTDSP1-208ENST00000482272 GLT8D1Q68CQ7 371 aa10.58□□□□□ -0.72
CTDSP1-208ENST00000482272 SIGIRRQ6IA17 410 aa10.58□□□□□ -0.72
CTDSP1-208ENST00000482272 TFAP2CQ92754 450 aa10.58□□□□□ -0.72
CTDSP1-208ENST00000482272 FAM46BQ96A09 425 aa10.58□□□□□ -0.72
CTDSP1-208ENST00000482272 Q96M66 194 aa10.58□□□□□ -0.72
CTDSP1-208ENST00000482272 VCXQ9H320 206 aa10.58□□□□□ -0.72
CTDSP1-208ENST00000482272 DCLRE1BQ9H816 532 aa10.58□□□□□ -0.72
CTDSP1-208ENST00000482272 NOTCH3Q9UM47 2321 aa10.57□□□□□ -0.72
CTDSP1-208ENST00000482272 H0YHG0 523 aa10.57□□□□□ -0.72
CTDSP1-208ENST00000482272 CASQ2O14958 399 aaPredicted RBP10.57□□□□□ -0.72
CTDSP1-208ENST00000482272 LANCL1O43813 399 aa10.57□□□□□ -0.72
CTDSP1-208ENST00000482272 PDCD6O75340 191 aa10.57□□□□□ -0.72
CTDSP1-208ENST00000482272 RGS11O94810 467 aa10.57□□□□□ -0.72
CTDSP1-208ENST00000482272 VDAC1P21796 283 aa10.57□□□□□ -0.72
CTDSP1-208ENST00000482272 CDX1P47902 265 aaPredicted RBP10.57□□□□□ -0.72
CTDSP1-208ENST00000482272 F2RL1P55085 397 aa10.57□□□□□ -0.72
CTDSP1-208ENST00000482272 ACSM3Q53FZ2 586 aa10.57□□□□□ -0.72
CTDSP1-208ENST00000482272 FAM27D1Q5T7N8 215 aa10.57□□□□□ -0.72
CTDSP1-208ENST00000482272 RNLSQ5VYX0 342 aa10.57□□□□□ -0.72
CTDSP1-208ENST00000482272 NEDD4LQ96PU5 975 aa10.57□□□□□ -0.72
CTDSP1-208ENST00000482272 P2RX4Q99571 388 aa10.57□□□□□ -0.72
CTDSP1-208ENST00000482272 CHCHD6Q9BRQ6 235 aa10.57□□□□□ -0.72
CTDSP1-208ENST00000482272 MND1Q9BWT6 205 aa10.57□□□□□ -0.72
CTDSP1-208ENST00000482272 MBNL3Q9NUK0 354 aaKnown RBP10.57□□□□□ -0.72
CTDSP1-208ENST00000482272 NKX1-2Q9UD57 310 aaPredicted RBP10.57□□□□□ -0.72
CTDSP1-208ENST00000482272 JPT1Q9UK76 154 aa10.57□□□□□ -0.72
CTDSP1-208ENST00000482272 WI2-2373I1.2A0A1W2PRP0 233 aa10.56□□□□□ -0.72
CTDSP1-208ENST00000482272 CCL24O00175 119 aa10.56□□□□□ -0.72
CTDSP1-208ENST00000482272 RPLP1P05386 114 aaKnown RBP10.56□□□□□ -0.72
CTDSP1-208ENST00000482272 OR5H8P0DN80 308 aa10.56□□□□□ -0.72
CTDSP1-208ENST00000482272 HTD2P86397 168 aa10.56□□□□□ -0.72
CTDSP1-208ENST00000482272 GABPB1Q06547 395 aaPredicted RBP10.56□□□□□ -0.72
CTDSP1-208ENST00000482272 FOXE3Q13461 319 aa10.56□□□□□ -0.72
CTDSP1-208ENST00000482272 KIR2DS1Q14954 304 aa10.56□□□□□ -0.72
CTDSP1-208ENST00000482272 NKAPLQ5M9Q1 402 aa10.56□□□□□ -0.72
CTDSP1-208ENST00000482272 FAM71E2Q8N5Q1 922 aa10.56□□□□□ -0.72
CTDSP1-208ENST00000482272 OR52L2PQ8NGH6 319 aa10.56□□□□□ -0.72
CTDSP1-208ENST00000482272 OR8U1Q8NH10 309 aa10.56□□□□□ -0.72
CTDSP1-208ENST00000482272 MRPL30Q8TCC3 161 aaKnown RBP10.56□□□□□ -0.72
CTDSP1-208ENST00000482272 GALMQ96C23 342 aa10.56□□□□□ -0.72
CTDSP1-208ENST00000482272 ABHD14AQ9BUJ0 271 aa10.56□□□□□ -0.72
CTDSP1-208ENST00000482272 KCNK15Q9H427 330 aa10.56□□□□□ -0.72
CTDSP1-208ENST00000482272 SCN3BQ9NY72 215 aa10.56□□□□□ -0.72
CTDSP1-208ENST00000482272 PTGES3LE9PB15 166 aa10.55□□□□□ -0.72
CTDSP1-208ENST00000482272 YPEL1O60688 119 aa10.55□□□□□ -0.72
CTDSP1-208ENST00000482272 CDK1P06493 297 aa10.55□□□□□ -0.72
CTDSP1-208ENST00000482272 SRMP19623 302 aa10.55□□□□□ -0.72
CTDSP1-208ENST00000482272 RAB25P57735 213 aa10.55□□□□□ -0.72
CTDSP1-208ENST00000482272 LSAMPQ13449 338 aa10.55□□□□□ -0.72
CTDSP1-208ENST00000482272 DCTN2Q13561 401 aaKnown RBP10.55□□□□□ -0.72
CTDSP1-208ENST00000482272 MMDQ15546 238 aa10.55□□□□□ -0.72
CTDSP1-208ENST00000482272 RBM48Q5RL73 367 aaKnown RBP10.55□□□□□ -0.72
CTDSP1-208ENST00000482272 LY6G6FQ5SQ64 297 aa10.55□□□□□ -0.72
CTDSP1-208ENST00000482272 VAX1Q5SQQ9 334 aa10.55□□□□□ -0.72
CTDSP1-208ENST00000482272 LCNL1Q6ZST4 164 aa10.55□□□□□ -0.72
CTDSP1-208ENST00000482272 KCNG3Q8TAE7 436 aa10.55□□□□□ -0.72
CTDSP1-208ENST00000482272 PHYHIPQ92561 330 aa10.55□□□□□ -0.72
CTDSP1-208ENST00000482272 RAX2Q96IS3 184 aa10.55□□□□□ -0.72
CTDSP1-208ENST00000482272 YPEL2Q96QA6 119 aa10.55□□□□□ -0.72
CTDSP1-208ENST00000482272 ZNF251Q9BRH9 671 aa10.55□□□□□ -0.72
CTDSP1-208ENST00000482272 ABRACLQ9P1F3 81 aa10.55□□□□□ -0.72
CTDSP1-208ENST00000482272 ZNF107Q9UII5 783 aaPredicted RBP10.55□□□□□ -0.72
CTDSP1-208ENST00000482272 LSM2Q9Y333 95 aaKnown RBP10.55□□□□□ -0.72
CTDSP1-208ENST00000482272 IGHG4P01861 327 aa10.54□□□□□ -0.72
CTDSP1-208ENST00000482272 IGF1P05019 195 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms