RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 FAM189A2Q15884 450 aa8.52□□□□□ -1.05
SSBP1-210ENST00000481508 CTF1Q16619 201 aa8.52□□□□□ -1.05
SSBP1-210ENST00000481508 LRRC75BQ2VPJ9 315 aa8.52□□□□□ -1.05
SSBP1-210ENST00000481508 TIMM50Q3ZCQ8 353 aa8.52□□□□□ -1.05
SSBP1-210ENST00000481508 C16orf87Q6PH81 154 aa8.52□□□□□ -1.05
SSBP1-210ENST00000481508 Q6ZTK2 550 aa8.52□□□□□ -1.05
SSBP1-210ENST00000481508 ANKRD13BQ86YJ7 626 aa8.52□□□□□ -1.05
SSBP1-210ENST00000481508 TMEM86BQ8N661 226 aa8.52□□□□□ -1.05
SSBP1-210ENST00000481508 ZNF439Q8NDP4 499 aa8.52□□□□□ -1.05
SSBP1-210ENST00000481508 OR10R2Q8NGX6 335 aa8.52□□□□□ -1.05
SSBP1-210ENST00000481508 OR9G1Q8NH87 305 aa8.52□□□□□ -1.05
SSBP1-210ENST00000481508 NDNFQ8TB73 568 aa8.52□□□□□ -1.05
SSBP1-210ENST00000481508 SETD6Q8TBK2 473 aa8.52□□□□□ -1.05
SSBP1-210ENST00000481508 PTX4Q96A99 478 aa8.52□□□□□ -1.05
SSBP1-210ENST00000481508 RAB3CQ96E17 227 aa8.52□□□□□ -1.05
SSBP1-210ENST00000481508 PARP12Q9H0J9 701 aaKnown RBP8.52□□□□□ -1.05
SSBP1-210ENST00000481508 ATG5Q9H1Y0 275 aa8.52□□□□□ -1.05
SSBP1-210ENST00000481508 POMT1Q9Y6A1 747 aa8.52□□□□□ -1.05
SSBP1-210ENST00000481508 TRBV6-6A0A0A6YYG2 114 aa8.51□□□□□ -1.05
SSBP1-210ENST00000481508 HIST1H1DP16402 221 aaKnown RBP8.51□□□□□ -1.05
SSBP1-210ENST00000481508 CD24P25063 80 aa8.51□□□□□ -1.05
SSBP1-210ENST00000481508 HTR1DP28221 377 aa8.51□□□□□ -1.05
SSBP1-210ENST00000481508 ACTG1P63261 375 aa8.51□□□□□ -1.05
SSBP1-210ENST00000481508 C6orf183Q5T699 404 aa8.51□□□□□ -1.05
SSBP1-210ENST00000481508 TPTE2P1Q5T6R2 138 aa8.51□□□□□ -1.05
SSBP1-210ENST00000481508 MINOS1Q5TGZ0 78 aa8.51□□□□□ -1.05
SSBP1-210ENST00000481508 C12orf54Q6X4T0 127 aa8.51□□□□□ -1.05
SSBP1-210ENST00000481508 OR10A7Q8NGE5 316 aa8.51□□□□□ -1.05
SSBP1-210ENST00000481508 ZNF596Q8TC21 504 aa8.51□□□□□ -1.05
SSBP1-210ENST00000481508 MAFIPQ8WZ33 124 aa8.51□□□□□ -1.05
SSBP1-210ENST00000481508 MALSU1Q96EH3 234 aa8.51□□□□□ -1.05
SSBP1-210ENST00000481508 MMP28Q9H239 520 aa8.51□□□□□ -1.05
SSBP1-210ENST00000481508 CHMP1AQ9HD42 196 aaPredicted RBP8.51□□□□□ -1.05
SSBP1-210ENST00000481508 Q9N2K0 584 aa8.51□□□□□ -1.05
SSBP1-210ENST00000481508 RHBDL2Q9NX52 303 aa8.51□□□□□ -1.05
SSBP1-210ENST00000481508 C1RLQ9NZP8 487 aa8.51□□□□□ -1.05
SSBP1-210ENST00000481508 DPM3Q9P2X0 92 aa8.51□□□□□ -1.05
SSBP1-210ENST00000481508 VPREB3Q9UKI3 123 aa8.51□□□□□ -1.05
SSBP1-210ENST00000481508 MINOS1-NBL1R4GNA1 71 aa8.51□□□□□ -1.05
SSBP1-210ENST00000481508 IGKV1D-8A0A087WSZ0 117 aa8.5□□□□□ -1.05
SSBP1-210ENST00000481508 IGKV1-6A0A0C4DH72 117 aa8.5□□□□□ -1.05
SSBP1-210ENST00000481508 A0A1W2PPI3 338 aa8.5□□□□□ -1.05
SSBP1-210ENST00000481508 TMEM89A2RUT3 159 aa8.5□□□□□ -1.05
SSBP1-210ENST00000481508 VGLL3A8MV65 326 aa8.5□□□□□ -1.05
SSBP1-210ENST00000481508 TOR1AO14656 332 aa8.5□□□□□ -1.05
SSBP1-210ENST00000481508 FCGR3AP08637 254 aa8.5□□□□□ -1.05
SSBP1-210ENST00000481508 SCTP09683 121 aa8.5□□□□□ -1.05
SSBP1-210ENST00000481508 HKR1P10072 659 aa8.5□□□□□ -1.05
SSBP1-210ENST00000481508 PPP1CCP36873 323 aaKnown RBP8.5□□□□□ -1.05
SSBP1-210ENST00000481508 HLA-DRB3P79483 266 aa8.5□□□□□ -1.05
SSBP1-210ENST00000481508 CT45A1Q5HYN5 189 aa8.5□□□□□ -1.05
SSBP1-210ENST00000481508 GPR141Q7Z602 305 aa8.5□□□□□ -1.05
SSBP1-210ENST00000481508 TMEM219Q86XT9 240 aa8.5□□□□□ -1.05
SSBP1-210ENST00000481508 IZUMO1Q8IYV9 350 aa8.5□□□□□ -1.05
SSBP1-210ENST00000481508 DTX3Q8N9I9 347 aa8.5□□□□□ -1.05
SSBP1-210ENST00000481508 OR52M1Q8NGK5 317 aa8.5□□□□□ -1.05
SSBP1-210ENST00000481508 CT45A3Q8NHU0 189 aa8.5□□□□□ -1.05
SSBP1-210ENST00000481508 CMSS1Q9BQ75 279 aaKnown RBP8.5□□□□□ -1.05
SSBP1-210ENST00000481508 DPAGT1Q9H3H5 408 aa8.5□□□□□ -1.05
SSBP1-210ENST00000481508 C12orf4Q9NQ89 552 aa8.5□□□□□ -1.05
SSBP1-210ENST00000481508 OR1A1Q9P1Q5 309 aa8.5□□□□□ -1.05
SSBP1-210ENST00000481508 ZNF230Q9UIE0 474 aaPredicted RBP8.5□□□□□ -1.05
SSBP1-210ENST00000481508 A6NDX4 124 aa8.49□□□□□ -1.05
SSBP1-210ENST00000481508 LEUTXA8MZ59 168 aa8.49□□□□□ -1.05
SSBP1-210ENST00000481508 H3BUI4 141 aa8.49□□□□□ -1.05
SSBP1-210ENST00000481508 SPINT2O43291 252 aa8.49□□□□□ -1.05
SSBP1-210ENST00000481508 SSX5O60225 188 aa8.49□□□□□ -1.05
SSBP1-210ENST00000481508 CD3GP09693 182 aa8.49□□□□□ -1.05
SSBP1-210ENST00000481508 PTHLHP12272 177 aa8.49□□□□□ -1.05
SSBP1-210ENST00000481508 MDKP21741 143 aaPredicted RBP8.49□□□□□ -1.05
SSBP1-210ENST00000481508 REG1BP48304 166 aa8.49□□□□□ -1.05
SSBP1-210ENST00000481508 PRRX1P54821 245 aa8.49□□□□□ -1.05
SSBP1-210ENST00000481508 SPCS2Q15005 226 aa8.49□□□□□ -1.05
SSBP1-210ENST00000481508 HERPUD1Q15011 391 aa8.49□□□□□ -1.05
SSBP1-210ENST00000481508 AANATQ16613 207 aa8.49□□□□□ -1.05
SSBP1-210ENST00000481508 ZNF260Q3ZCT1 412 aa8.49□□□□□ -1.05
SSBP1-210ENST00000481508 MORN2Q502X0 79 aa8.49□□□□□ -1.05
SSBP1-210ENST00000481508 AWAT1Q58HT5 328 aa8.49□□□□□ -1.05
SSBP1-210ENST00000481508 TRAT1Q6PIZ9 186 aa8.49□□□□□ -1.05
SSBP1-210ENST00000481508 LINC00311Q8N616 119 aa8.49□□□□□ -1.05
SSBP1-210ENST00000481508 NUDCD2Q8WVJ2 157 aa8.49□□□□□ -1.05
SSBP1-210ENST00000481508 SLC25A46Q96AG3 418 aa8.49□□□□□ -1.05
SSBP1-210ENST00000481508 OR2S2Q9NQN1 319 aa8.49□□□□□ -1.05
SSBP1-210ENST00000481508 KCNIP1Q9NZI2 227 aa8.49□□□□□ -1.05
SSBP1-210ENST00000481508 GNG12Q9UBI6 72 aa8.49□□□□□ -1.05
SSBP1-210ENST00000481508 SPATA2Q9UM82 520 aa8.49□□□□□ -1.05
SSBP1-210ENST00000481508 TCF19Q9Y242 345 aa8.49□□□□□ -1.05
SSBP1-210ENST00000481508 METTL21EPA6NDL7 271 aa8.48□□□□□ -1.05
SSBP1-210ENST00000481508 TMEM235A6NFC5 223 aa8.48□□□□□ -1.05
SSBP1-210ENST00000481508 DYNLT3P51808 116 aa8.48□□□□□ -1.05
SSBP1-210ENST00000481508 CDNFQ49AH0 187 aa8.48□□□□□ -1.05
SSBP1-210ENST00000481508 Q6ZSV7 163 aa8.48□□□□□ -1.05
SSBP1-210ENST00000481508 SLC25A48Q6ZT89 311 aaKnown RBP8.48□□□□□ -1.05
SSBP1-210ENST00000481508 MOB1BQ7L9L4 216 aa8.48□□□□□ -1.05
SSBP1-210ENST00000481508 CLVS1Q8IUQ0 354 aaPredicted RBP8.48□□□□□ -1.05
SSBP1-210ENST00000481508 ODF3L1Q8IXM7 274 aa8.48□□□□□ -1.05
SSBP1-210ENST00000481508 C8orf31Q8N9H6 132 aa8.48□□□□□ -1.05
SSBP1-210ENST00000481508 OR5R1Q8NH85 324 aa8.48□□□□□ -1.05
SSBP1-210ENST00000481508 IL1F10Q8WWZ1 152 aa8.48□□□□□ -1.05
SSBP1-210ENST00000481508 CFHR4Q92496 578 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms