RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 FLYWCH2Q96CP2 140 aaKnown RBP16.42■□□□□ 0.22
CCM2-214ENST00000481194 KRBOX1C9JBD0 128 aa16.41■□□□□ 0.22
CCM2-214ENST00000481194 HPRT1P00492 218 aa16.41■□□□□ 0.22
CCM2-214ENST00000481194 ADRB1P08588 477 aa16.41■□□□□ 0.22
CCM2-214ENST00000481194 H2AFB1P0C5Y9 115 aa16.41■□□□□ 0.22
CCM2-214ENST00000481194 MC5RP33032 325 aa16.41■□□□□ 0.22
CCM2-214ENST00000481194 PPP1CCP36873 323 aaKnown RBP16.41■□□□□ 0.22
CCM2-214ENST00000481194 FAM74A1Q5RGS3 127 aa16.41■□□□□ 0.22
CCM2-214ENST00000481194 INSIG2Q9Y5U4 225 aa16.41■□□□□ 0.22
CCM2-214ENST00000481194 SNAPINO95295 136 aa16.41■□□□□ 0.22
CCM2-214ENST00000481194 TAGLN2P37802 199 aaKnown RBP16.41■□□□□ 0.22
CCM2-214ENST00000481194 RAB32Q13637 225 aa16.41■□□□□ 0.22
CCM2-214ENST00000481194 TMEM182Q6ZP80 229 aaPredicted RBP16.41■□□□□ 0.22
CCM2-214ENST00000481194 DKK1O94907 266 aa16.41■□□□□ 0.22
CCM2-214ENST00000481194 KCNRGQ8N5I3 272 aa16.41■□□□□ 0.22
CCM2-214ENST00000481194 NUP37Q8NFH4 326 aa16.41■□□□□ 0.22
CCM2-214ENST00000481194 SOX15O60248 233 aa16.41■□□□□ 0.22
CCM2-214ENST00000481194 PGA5P0DJD9 388 aa16.41■□□□□ 0.22
CCM2-214ENST00000481194 MARC2Q969Z3 335 aa16.41■□□□□ 0.22
CCM2-214ENST00000481194 TRBV23-1A0A0A0MS06 115 aa16.4■□□□□ 0.22
CCM2-214ENST00000481194 F2RL2O00254 374 aa16.4■□□□□ 0.22
CCM2-214ENST00000481194 FGFBP3Q8TAT2 258 aa16.4■□□□□ 0.22
CCM2-214ENST00000481194 CBLN4Q9NTU7 201 aa16.4■□□□□ 0.22
CCM2-214ENST00000481194 UQCC1Q9NVA1 299 aa16.4■□□□□ 0.22
CCM2-214ENST00000481194 A0A0G2JNJ9 132 aa16.4■□□□□ 0.22
CCM2-214ENST00000481194 CST9LP1Q5W188 147 aa16.4■□□□□ 0.22
CCM2-214ENST00000481194 THYN1Q9P016 225 aa16.4■□□□□ 0.22
CCM2-214ENST00000481194 Q9UFV3 132 aa16.4■□□□□ 0.22
CCM2-214ENST00000481194 ADAD2Q8NCV1 583 aaKnown RBP16.4■□□□□ 0.22
CCM2-214ENST00000481194 OR2C3Q8N628 320 aa16.4■□□□□ 0.22
CCM2-214ENST00000481194 ST8SIA2Q92186 375 aa16.4■□□□□ 0.22
CCM2-214ENST00000481194 SCTP09683 121 aa16.39■□□□□ 0.21
CCM2-214ENST00000481194 IGSF11Q5DX21 431 aa16.39■□□□□ 0.21
CCM2-214ENST00000481194 OR4D10Q8NGI6 311 aa16.39■□□□□ 0.21
CCM2-214ENST00000481194 BORCS7Q96B45 105 aa16.39■□□□□ 0.21
CCM2-214ENST00000481194 RALYQ9UKM9 306 aaKnown RBP16.39■□□□□ 0.21
CCM2-214ENST00000481194 IGHV3-13P01766 116 aa16.39■□□□□ 0.21
CCM2-214ENST00000481194 GAPDHP04406 335 aaKnown RBP16.39■□□□□ 0.21
CCM2-214ENST00000481194 SRP14P37108 136 aaKnown RBP16.39■□□□□ 0.21
CCM2-214ENST00000481194 THNSL2Q86YJ6 484 aa16.39■□□□□ 0.21
CCM2-214ENST00000481194 GTF3AQ92664 365 aaKnown RBP16.39■□□□□ 0.21
CCM2-214ENST00000481194 GNB4Q9HAV0 340 aa16.39■□□□□ 0.21
CCM2-214ENST00000481194 SEBOXQ9HB31 216 aaPredicted RBP16.39■□□□□ 0.21
CCM2-214ENST00000481194 FGF7P21781 194 aa16.39■□□□□ 0.21
CCM2-214ENST00000481194 WNT5AP41221 380 aa16.39■□□□□ 0.21
CCM2-214ENST00000481194 ABHD14BQ96IU4 210 aa16.39■□□□□ 0.21
CCM2-214ENST00000481194 IFITM3Q01628 133 aa16.39■□□□□ 0.21
CCM2-214ENST00000481194 AVPI1Q5T686 147 aa16.39■□□□□ 0.21
CCM2-214ENST00000481194 OR52L2PQ8NGH6 319 aa16.39■□□□□ 0.21
CCM2-214ENST00000481194 ARV1Q9H2C2 271 aa16.39■□□□□ 0.21
CCM2-214ENST00000481194 POMT1Q9Y6A1 747 aa16.39■□□□□ 0.21
CCM2-214ENST00000481194 SYNGR2O43760 224 aa16.38■□□□□ 0.21
CCM2-214ENST00000481194 OTX1P32242 354 aaPredicted RBP16.38■□□□□ 0.21
CCM2-214ENST00000481194 ELLP55199 621 aaPredicted RBP16.38■□□□□ 0.21
CCM2-214ENST00000481194 MEF2CQ06413 473 aaPredicted RBP16.38■□□□□ 0.21
CCM2-214ENST00000481194 ZNF529Q6P280 563 aa16.38■□□□□ 0.21
CCM2-214ENST00000481194 PPP1R14DQ9NXH3 145 aa16.38■□□□□ 0.21
CCM2-214ENST00000481194 ANKRD34BA5PLL1 514 aa16.38■□□□□ 0.21
CCM2-214ENST00000481194 IL22RA2Q969J5 263 aa16.38■□□□□ 0.21
CCM2-214ENST00000481194 BOLA1Q9Y3E2 137 aa16.38■□□□□ 0.21
CCM2-214ENST00000481194 K7EQM0 130 aa16.38■□□□□ 0.21
CCM2-214ENST00000481194 FOXH1O75593 365 aa16.38■□□□□ 0.21
CCM2-214ENST00000481194 SLC38A11Q08AI6 406 aa16.38■□□□□ 0.21
CCM2-214ENST00000481194 SLC25A28Q96A46 364 aa16.38■□□□□ 0.21
CCM2-214ENST00000481194 TRAV39A0A0B4J263 110 aa16.38■□□□□ 0.21
CCM2-214ENST00000481194 MEX3AA1L020 520 aaKnown RBP16.38■□□□□ 0.21
CCM2-214ENST00000481194 NKX2-6A6NCS4 301 aa16.38■□□□□ 0.21
CCM2-214ENST00000481194 TXNL1O43396 289 aa16.38■□□□□ 0.21
CCM2-214ENST00000481194 OVCH2Q7RTZ1 564 aa16.38■□□□□ 0.21
CCM2-214ENST00000481194 MTCH1Q9NZJ7 389 aa16.38■□□□□ 0.21
CCM2-214ENST00000481194 TMEM131Q92545 1883 aa16.38■□□□□ 0.21
CCM2-214ENST00000481194 MMP9P14780 707 aa16.38■□□□□ 0.21
CCM2-214ENST00000481194 SVBPQ8N300 66 aa16.38■□□□□ 0.21
CCM2-214ENST00000481194 CALHM1Q8IU99 346 aa16.37■□□□□ 0.21
CCM2-214ENST00000481194 PHYHIPLQ96FC7 376 aa16.37■□□□□ 0.21
CCM2-214ENST00000481194 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.37■□□□□ 0.21
CCM2-214ENST00000481194 ZFP92A6NM28 416 aa16.37■□□□□ 0.21
CCM2-214ENST00000481194 HNF1AP20823 631 aa16.37■□□□□ 0.21
CCM2-214ENST00000481194 CEBPDP49716 269 aaPredicted RBP16.37■□□□□ 0.21
CCM2-214ENST00000481194 ATP5J2P56134 94 aa16.37■□□□□ 0.21
CCM2-214ENST00000481194 C1QL2Q7Z5L3 287 aa16.37■□□□□ 0.21
CCM2-214ENST00000481194 RSPO3Q9BXY4 272 aaPredicted RBP16.37■□□□□ 0.21
CCM2-214ENST00000481194 LIPFP07098 398 aa16.37■□□□□ 0.21
CCM2-214ENST00000481194 HES4Q9HCC6 221 aa16.37■□□□□ 0.21
CCM2-214ENST00000481194 SFT2D1Q8WV19 159 aa16.37■□□□□ 0.21
CCM2-214ENST00000481194 HARBI1Q96MB7 349 aa16.37■□□□□ 0.21
CCM2-214ENST00000481194 TMEM147Q9BVK8 224 aa16.37■□□□□ 0.21
CCM2-214ENST00000481194 MRPL37Q9BZE1 423 aaKnown RBP16.37■□□□□ 0.21
CCM2-214ENST00000481194 CRYM-AS1A6NIL9 109 aa16.36■□□□□ 0.21
CCM2-214ENST00000481194 ARL3P36405 182 aa16.36■□□□□ 0.21
CCM2-214ENST00000481194 FAM216AQ8WUB2 273 aa16.36■□□□□ 0.21
CCM2-214ENST00000481194 TMEM222Q9H0R3 208 aa16.36■□□□□ 0.21
CCM2-214ENST00000481194 ZNF319Q9P2F9 582 aa16.36■□□□□ 0.21
CCM2-214ENST00000481194 PPIAL4CA0A0B4J2A2 164 aa16.36■□□□□ 0.21
CCM2-214ENST00000481194 ADAP1O75689 374 aa16.36■□□□□ 0.21
CCM2-214ENST00000481194 PPIAL4GP0DN37 164 aa16.36■□□□□ 0.21
CCM2-214ENST00000481194 BMI1P35226 326 aa16.36■□□□□ 0.21
CCM2-214ENST00000481194 TMEM50BP56557 158 aa16.36■□□□□ 0.21
CCM2-214ENST00000481194 USF2Q15853 346 aaPredicted RBP16.36■□□□□ 0.21
CCM2-214ENST00000481194 TMEM255AQ5JRV8 349 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms