RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 SLC38A1Q9H2H9 487 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 DSN1Q9H410 356 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 TPT1P8Q9HAU6 139 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 BEX1Q9HBH7 125 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 MED11Q9P086 117 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 PDP1Q9P0J1 537 aaPredicted RBP3.22□□□□□ -1.89
UPF3A-207ENST00000481131 BOKQ9UMX3 212 aaPredicted RBP3.22□□□□□ -1.89
UPF3A-207ENST00000481131 C15orf41Q9Y2V0 281 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 CAB39Q9Y376 341 aaPredicted RBP3.22□□□□□ -1.89
UPF3A-207ENST00000481131 FREM1Q5H8C1 2179 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 COL12A1Q99715 3063 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 ICE1Q9Y2F5 2266 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 IGLV4-69A0A075B6H9 119 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 IGHV3-74A0A0B4J1X5 117 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 KBTBD11-OT1A0A1B0GTJ5 212 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 A0A1B0GVX0 72 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 LYRM9A8MSI8 78 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 H0YC42 278 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 J3QKU1 62 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 NME4O00746 187 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 CASQ2O14958 399 aaPredicted RBP3.21□□□□□ -1.9
UPF3A-207ENST00000481131 SLC19A2O60779 497 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 GCM2O75603 506 aaPredicted RBP3.21□□□□□ -1.9
UPF3A-207ENST00000481131 TRAPPC6AO75865 159 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 KRT75O95678 551 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 EPPINO95925 133 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 OPN1SWP03999 348 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 KRT16P08779 473 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 TFPTP0C1Z6 253 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 UBTFL6P0CB48 400 aaPredicted RBP3.21□□□□□ -1.9
UPF3A-207ENST00000481131 PTNP21246 168 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 GSTM3P21266 225 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 RPS4Y1P22090 263 aaKnown RBP3.21□□□□□ -1.9
UPF3A-207ENST00000481131 HOXC5Q00444 222 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 SKP2Q13309 424 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 PGGHGQ32M88 737 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 TRMT5Q32P41 509 aaKnown RBP3.21□□□□□ -1.9
UPF3A-207ENST00000481131 METTL21CQ5VZV1 264 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 NANOGP8Q6NSW7 305 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 PLET1Q6UQ28 207 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 PLCZ1Q86YW0 608 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 TRIML2Q8N7C3 387 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 ST6GALNAC3Q8NDV1 305 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 NOXO1Q8NFA2 376 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 OR4K17Q8NGC6 315 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 OR10AD1Q8NGE0 317 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 OR9G4Q8NGQ1 327 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 EEF1AKMT3Q96AZ1 226 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 WFDC6Q9BQY6 131 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 SLC25A2Q9BXI2 301 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 UGT2B28Q9BY64 529 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 UCK2Q9BZX2 261 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 IFI27L2Q9H2X8 130 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 RPP21Q9H633 154 aaKnown RBP3.21□□□□□ -1.9
UPF3A-207ENST00000481131 NTN4Q9HB63 628 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 CCNB1IP1Q9NPC3 277 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 AGPAT4Q9NRZ5 378 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 CLN8Q9UBY8 286 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 DKKL1Q9UK85 242 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 KLK12Q9UKR0 248 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 ARL2BPQ9Y2Y0 163 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 NDUFAF1Q9Y375 327 aa3.21□□□□□ -1.9
UPF3A-207ENST00000481131 SPTBN1Q01082 2364 aaKnown RBP3.2□□□□□ -1.9
UPF3A-207ENST00000481131 DSPPQ9NZW4 1301 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 PTPN13Q12923 2485 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 LRRK2Q5S007 2527 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 TRGV5A0A0B4J1U4 118 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 TRAV25A0A0B4J276 109 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 A0A1W2PQD3 144 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 NCBP2LA6PVI3 153 aaKnown RBP3.2□□□□□ -1.9
UPF3A-207ENST00000481131 BBIP1A8MTZ0 92 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 AIREO43918 545 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 TPST1O60507 370 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 CCDC22O60826 627 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 AQP8O94778 261 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 GABARAPO95166 117 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 FAM107AO95990 144 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 CSTAP01040 98 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 CT45A6P0DMU7 189 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 CT45A5P0DMU8 189 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 CT45A7P0DMV0 189 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 CTRB1P17538 263 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 GPX2P18283 190 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 CEACAM3P40198 252 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 NUDT2P50583 147 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 GZMMP51124 257 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 PSMD4P55036 377 aaKnown RBP3.2□□□□□ -1.9
UPF3A-207ENST00000481131 HPCAP84074 193 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 CDK6Q00534 326 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 DMTNQ08495 405 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 FOXF1Q12946 379 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 FADDQ13158 208 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 MAPRE2Q15555 327 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 ZNF141Q15928 474 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 DEFB116Q30KQ4 102 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 PLPPR5Q32ZL2 321 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 CT45A1Q5HYN5 189 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 MRPL2Q5T653 305 aaKnown RBP3.2□□□□□ -1.9
UPF3A-207ENST00000481131 UBE2UQ5VVX9 321 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 ARL9Q6T311 187 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms