RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 RTN4RL2Q86UN3 420 aa9.94□□□□□ -0.82
PTPRF-213ENST00000481019 DYNAPQ8N1N2 210 aa9.94□□□□□ -0.82
PTPRF-213ENST00000481019 DTX3Q8N9I9 347 aa9.94□□□□□ -0.82
PTPRF-213ENST00000481019 OR52I2Q8NH67 350 aa9.94□□□□□ -0.82
PTPRF-213ENST00000481019 ZDHHC16Q969W1 377 aa9.94□□□□□ -0.82
PTPRF-213ENST00000481019 ARHGAP5-AS1Q96IT6 56 aa9.94□□□□□ -0.82
PTPRF-213ENST00000481019 ZNF714Q96N38 554 aa9.94□□□□□ -0.82
PTPRF-213ENST00000481019 CMSS1Q9BQ75 279 aaKnown RBP9.94□□□□□ -0.82
PTPRF-213ENST00000481019 OCSTAMPQ9BR26 566 aa9.94□□□□□ -0.82
PTPRF-213ENST00000481019 NICN1Q9BSH3 213 aa9.94□□□□□ -0.82
PTPRF-213ENST00000481019 CHIAQ9BZP6 476 aa9.94□□□□□ -0.82
PTPRF-213ENST00000481019 COPZ2Q9P299 210 aa9.94□□□□□ -0.82
PTPRF-213ENST00000481019 KIF25Q9UIL4 384 aa9.94□□□□□ -0.82
PTPRF-213ENST00000481019 LINC00312Q9Y6C7 94 aa9.94□□□□□ -0.82
PTPRF-213ENST00000481019 hADV38S2A0JD32 116 aa9.93□□□□□ -0.82
PTPRF-213ENST00000481019 FUOMA2VDF0 154 aa9.93□□□□□ -0.82
PTPRF-213ENST00000481019 TMEM235A6NFC5 223 aa9.93□□□□□ -0.82
PTPRF-213ENST00000481019 FOXI3A8MTJ6 420 aaPredicted RBP9.93□□□□□ -0.82
PTPRF-213ENST00000481019 CSN2P05814 226 aa9.93□□□□□ -0.82
PTPRF-213ENST00000481019 RNASE1P07998 156 aaKnown RBP9.93□□□□□ -0.82
PTPRF-213ENST00000481019 CGB3P0DN86 165 aa9.93□□□□□ -0.82
PTPRF-213ENST00000481019 CGB7P0DN87 165 aa9.93□□□□□ -0.82
PTPRF-213ENST00000481019 OMGP23515 440 aa9.93□□□□□ -0.82
PTPRF-213ENST00000481019 DGCR2P98153 550 aa9.93□□□□□ -0.82
PTPRF-213ENST00000481019 MEF2DQ14814 521 aa9.93□□□□□ -0.82
PTPRF-213ENST00000481019 SRSF7Q16629 238 aaKnown RBP eCLIP9.93□□□□□ -0.82
PTPRF-213ENST00000481019 C17orf58Q2M2W7 97 aa9.93□□□□□ -0.82
PTPRF-213ENST00000481019 TRIM16LQ309B1 348 aa9.93□□□□□ -0.82
PTPRF-213ENST00000481019 MOGAT2Q3SYC2 334 aa9.93□□□□□ -0.82
PTPRF-213ENST00000481019 PLAC9Q5JTB6 97 aa9.93□□□□□ -0.82
PTPRF-213ENST00000481019 SIGIRRQ6IA17 410 aa9.93□□□□□ -0.82
PTPRF-213ENST00000481019 LDLRAD3Q86YD5 345 aa9.93□□□□□ -0.82
PTPRF-213ENST00000481019 TMEM229BQ8NBD8 167 aa9.93□□□□□ -0.82
PTPRF-213ENST00000481019 OR13A1Q8NGR1 328 aa9.93□□□□□ -0.82
PTPRF-213ENST00000481019 NEK7Q8TDX7 302 aa9.93□□□□□ -0.82
PTPRF-213ENST00000481019 DYRK2Q92630 601 aa9.93□□□□□ -0.82
PTPRF-213ENST00000481019 CORO2AQ92828 525 aa9.93□□□□□ -0.82
PTPRF-213ENST00000481019 JMJD8Q96S16 334 aa9.93□□□□□ -0.82
PTPRF-213ENST00000481019 DPCDQ9BVM2 203 aaPredicted RBP9.93□□□□□ -0.82
PTPRF-213ENST00000481019 RCC2Q9P258 522 aaKnown RBP9.93□□□□□ -0.82
PTPRF-213ENST00000481019 A0A0A6YYD4 124 aa9.92□□□□□ -0.82
PTPRF-213ENST00000481019 A0A1W2PPH5 198 aa9.92□□□□□ -0.82
PTPRF-213ENST00000481019 ANKRD20A5PA0PJZ0 165 aa9.92□□□□□ -0.82
PTPRF-213ENST00000481019 FAM172BPA6NC97 362 aa9.92□□□□□ -0.82
PTPRF-213ENST00000481019 ODF3BA8MYP8 253 aa9.92□□□□□ -0.82
PTPRF-213ENST00000481019 ZNF736B4DX44 427 aaPredicted RBP9.92□□□□□ -0.82
PTPRF-213ENST00000481019 CLDN34H7C241 214 aa9.92□□□□□ -0.82
PTPRF-213ENST00000481019 LYRM1O43325 122 aa9.92□□□□□ -0.82
PTPRF-213ENST00000481019 AKAIN1P0CW23 69 aa9.92□□□□□ -0.82
PTPRF-213ENST00000481019 IER3P46695 156 aa9.92□□□□□ -0.82
PTPRF-213ENST00000481019 TAS2R46P59540 309 aa9.92□□□□□ -0.82
PTPRF-213ENST00000481019 GUCA2AQ02747 115 aa9.92□□□□□ -0.82
PTPRF-213ENST00000481019 MADCAM1Q13477 382 aa9.92□□□□□ -0.82
PTPRF-213ENST00000481019 FAM53AQ6NSI3 398 aaPredicted RBP9.92□□□□□ -0.82
PTPRF-213ENST00000481019 C5orf24Q7Z6I8 188 aa9.92□□□□□ -0.82
PTPRF-213ENST00000481019 TRAPPC6BQ86SZ2 158 aa9.92□□□□□ -0.82
PTPRF-213ENST00000481019 TMEM17Q86X19 198 aa9.92□□□□□ -0.82
PTPRF-213ENST00000481019 SPATA3Q8NHX4 192 aa9.92□□□□□ -0.82
PTPRF-213ENST00000481019 ENKURQ8TC29 256 aa9.92□□□□□ -0.82
PTPRF-213ENST00000481019 TRIM63Q969Q1 353 aa9.92□□□□□ -0.82
PTPRF-213ENST00000481019 HEXA-AS1Q9H8Q6 139 aa9.92□□□□□ -0.82
PTPRF-213ENST00000481019 ZMAT3Q9HA38 289 aaKnown RBP9.92□□□□□ -0.82
PTPRF-213ENST00000481019 C12orf4Q9NQ89 552 aa9.92□□□□□ -0.82
PTPRF-213ENST00000481019 ZNRD1Q9P1U0 126 aa9.92□□□□□ -0.82
PTPRF-213ENST00000481019 KLK11Q9UBX7 282 aa9.92□□□□□ -0.82
PTPRF-213ENST00000481019 UBE2J1Q9Y385 318 aaPredicted RBP9.92□□□□□ -0.82
PTPRF-213ENST00000481019 SESN1Q9Y6P5 492 aa9.92□□□□□ -0.82
PTPRF-213ENST00000481019 MEIKINA0A087WXM9 373 aa9.91□□□□□ -0.82
PTPRF-213ENST00000481019 TRGV10A0A0A0MS01 117 aa9.91□□□□□ -0.82
PTPRF-213ENST00000481019 FAM240BA0A1B0GVZ2 78 aa9.91□□□□□ -0.82
PTPRF-213ENST00000481019 TMEM89A2RUT3 159 aa9.91□□□□□ -0.82
PTPRF-213ENST00000481019 RBP4P02753 201 aa9.91□□□□□ -0.82
PTPRF-213ENST00000481019 IFNA6P05013 189 aa9.91□□□□□ -0.82
PTPRF-213ENST00000481019 RELBQ01201 579 aa9.91□□□□□ -0.82
PTPRF-213ENST00000481019 MIDNQ504T8 468 aa9.91□□□□□ -0.82
PTPRF-213ENST00000481019 C6orf201Q7Z4U5 140 aa9.91□□□□□ -0.82
PTPRF-213ENST00000481019 UBALD1Q8TB05 177 aa9.91□□□□□ -0.82
PTPRF-213ENST00000481019 CHPT1Q8WUD6 406 aa9.91□□□□□ -0.82
PTPRF-213ENST00000481019 FAAP24Q9BTP7 215 aa9.91□□□□□ -0.82
PTPRF-213ENST00000481019 CHMP1AQ9HD42 196 aaPredicted RBP9.91□□□□□ -0.82
PTPRF-213ENST00000481019 RAB9BQ9NP90 201 aa9.91□□□□□ -0.82
PTPRF-213ENST00000481019 ETAA1Q9NY74 926 aa9.91□□□□□ -0.82
PTPRF-213ENST00000481019 SCP2D1Q9UJQ7 156 aa9.91□□□□□ -0.82
PTPRF-213ENST00000481019 FAM96BQ9Y3D0 163 aa9.91□□□□□ -0.82
PTPRF-213ENST00000481019 IGHV2-26A0A0B4J1V2 119 aa9.9□□□□□ -0.82
PTPRF-213ENST00000481019 FAM181BA6NEQ2 426 aa9.9□□□□□ -0.82
PTPRF-213ENST00000481019 DISC1C4P0D8 188 aa9.9□□□□□ -0.82
PTPRF-213ENST00000481019 ARG1P05089 322 aa9.9□□□□□ -0.82
PTPRF-213ENST00000481019 FBP1P09467 338 aa9.9□□□□□ -0.82
PTPRF-213ENST00000481019 CTXN2P0C2S0 81 aa9.9□□□□□ -0.82
PTPRF-213ENST00000481019 NAT1P18440 290 aa9.9□□□□□ -0.82
PTPRF-213ENST00000481019 GLP1RP43220 463 aa9.9□□□□□ -0.82
PTPRF-213ENST00000481019 KIR2DS4P43632 304 aa9.9□□□□□ -0.82
PTPRF-213ENST00000481019 OR3A3P47888 321 aa9.9□□□□□ -0.82
PTPRF-213ENST00000481019 IFITM3Q01628 133 aa9.9□□□□□ -0.82
PTPRF-213ENST00000481019 PAX5Q02548 391 aa9.9□□□□□ -0.82
PTPRF-213ENST00000481019 KLF9Q13886 244 aaPredicted RBP9.9□□□□□ -0.82
PTPRF-213ENST00000481019 KIR2DS1Q14954 304 aa9.9□□□□□ -0.82
PTPRF-213ENST00000481019 RNASE10Q5GAN6 216 aaKnown RBP9.9□□□□□ -0.82
PTPRF-213ENST00000481019 ZNF626Q68DY1 528 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms