RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 GPR50Q13585 617 aa11.99□□□□□ -0.49
LIMS3-203ENST00000480744 PNLIPRP3Q17RR3 467 aa11.99□□□□□ -0.49
LIMS3-203ENST00000480744 CXorf66Q5JRM2 361 aaPredicted RBP11.99□□□□□ -0.49
LIMS3-203ENST00000480744 UNQ9370/PRO34162Q6UXP9 181 aa11.99□□□□□ -0.49
LIMS3-203ENST00000480744 SLC25A48Q6ZT89 311 aaKnown RBP11.99□□□□□ -0.49
LIMS3-203ENST00000480744 TMEM104Q8NE00 496 aa11.99□□□□□ -0.49
LIMS3-203ENST00000480744 ST6GALNAC6Q969X2 333 aa11.99□□□□□ -0.49
LIMS3-203ENST00000480744 MRPS24Q96EL2 167 aaKnown RBP11.99□□□□□ -0.49
LIMS3-203ENST00000480744 RAX2Q96IS3 184 aa11.99□□□□□ -0.49
LIMS3-203ENST00000480744 CNBD2Q96M20 576 aa11.99□□□□□ -0.49
LIMS3-203ENST00000480744 S1PR3Q99500 378 aa11.99□□□□□ -0.49
LIMS3-203ENST00000480744 P2RX4Q99571 388 aa11.99□□□□□ -0.49
LIMS3-203ENST00000480744 GON7Q9BXV9 100 aa11.99□□□□□ -0.49
LIMS3-203ENST00000480744 COL7A1Q02388 2944 aa11.99□□□□□ -0.49
LIMS3-203ENST00000480744 PTGES3LE9PB15 166 aa11.98□□□□□ -0.49
LIMS3-203ENST00000480744 CCL24O00175 119 aa11.98□□□□□ -0.49
LIMS3-203ENST00000480744 MYL12BO14950 172 aa11.98□□□□□ -0.49
LIMS3-203ENST00000480744 RRP9O43818 475 aaKnown RBP11.98□□□□□ -0.49
LIMS3-203ENST00000480744 RCC1P18754 421 aaPredicted RBP11.98□□□□□ -0.49
LIMS3-203ENST00000480744 ZNF134P52741 427 aa11.98□□□□□ -0.49
LIMS3-203ENST00000480744 CD69Q07108 199 aa11.98□□□□□ -0.49
LIMS3-203ENST00000480744 DEFB136Q30KP8 78 aa11.98□□□□□ -0.49
LIMS3-203ENST00000480744 TMEM30BQ3MIR4 351 aa11.98□□□□□ -0.49
LIMS3-203ENST00000480744 Q3ZCU0 254 aa11.98□□□□□ -0.49
LIMS3-203ENST00000480744 CT45A1Q5HYN5 189 aa11.98□□□□□ -0.49
LIMS3-203ENST00000480744 TRAT1Q6PIZ9 186 aa11.98□□□□□ -0.49
LIMS3-203ENST00000480744 ZNF439Q8NDP4 499 aa11.98□□□□□ -0.49
LIMS3-203ENST00000480744 CT45A3Q8NHU0 189 aa11.98□□□□□ -0.49
LIMS3-203ENST00000480744 FAM46BQ96A09 425 aa11.98□□□□□ -0.49
LIMS3-203ENST00000480744 DERL3Q96Q80 235 aa11.98□□□□□ -0.49
LIMS3-203ENST00000480744 HSPB9Q9BQS6 159 aa11.98□□□□□ -0.49
LIMS3-203ENST00000480744 PLSCR3Q9NRY6 295 aa11.98□□□□□ -0.49
LIMS3-203ENST00000480744 RAB26Q9ULW5 256 aa11.98□□□□□ -0.49
LIMS3-203ENST00000480744 CELP19835 753 aa11.97□□□□□ -0.49
LIMS3-203ENST00000480744 FUT3P21217 361 aa11.97□□□□□ -0.49
LIMS3-203ENST00000480744 VDAC1P21796 283 aa11.97□□□□□ -0.49
LIMS3-203ENST00000480744 SOX6P35712 828 aa11.97□□□□□ -0.49
LIMS3-203ENST00000480744 F2RL1P55085 397 aa11.97□□□□□ -0.49
LIMS3-203ENST00000480744 NANOGP1Q8N7R0 232 aa11.97□□□□□ -0.49
LIMS3-203ENST00000480744 OR8H1Q8NGG4 311 aa11.97□□□□□ -0.49
LIMS3-203ENST00000480744 CYYR1Q96J86 154 aa11.97□□□□□ -0.49
LIMS3-203ENST00000480744 TAF9BQ9HBM6 251 aa11.97□□□□□ -0.49
LIMS3-203ENST00000480744 OR2S2Q9NQN1 319 aa11.97□□□□□ -0.49
LIMS3-203ENST00000480744 KCNIP1Q9NZI2 227 aa11.97□□□□□ -0.49
LIMS3-203ENST00000480744 LSM2Q9Y333 95 aaKnown RBP11.97□□□□□ -0.49
LIMS3-203ENST00000480744 FAM90A10PA6NDY2 464 aa11.96□□□□□ -0.49
LIMS3-203ENST00000480744 FAM90A7PA6NKC0 464 aa11.96□□□□□ -0.49
LIMS3-203ENST00000480744 FAM90A23PA8MXZ1 464 aa11.96□□□□□ -0.49
LIMS3-203ENST00000480744 SLC2A2P11168 524 aaPredicted RBP11.96□□□□□ -0.49
LIMS3-203ENST00000480744 CRHBPP24387 322 aa11.96□□□□□ -0.49
LIMS3-203ENST00000480744 ZNF137PP52743 207 aa11.96□□□□□ -0.49
LIMS3-203ENST00000480744 WNT4P56705 351 aa11.96□□□□□ -0.49
LIMS3-203ENST00000480744 DGCR2P98153 550 aa11.96□□□□□ -0.49
LIMS3-203ENST00000480744 LSAMPQ13449 338 aa11.96□□□□□ -0.49
LIMS3-203ENST00000480744 FOXE3Q13461 319 aa11.96□□□□□ -0.49
LIMS3-203ENST00000480744 IRF3Q14653 427 aa11.96□□□□□ -0.49
LIMS3-203ENST00000480744 GNMTQ14749 295 aa11.96□□□□□ -0.49
LIMS3-203ENST00000480744 NKAPLQ5M9Q1 402 aa11.96□□□□□ -0.49
LIMS3-203ENST00000480744 C5orf24Q7Z6I8 188 aa11.96□□□□□ -0.49
LIMS3-203ENST00000480744 CDH26Q8IXH8 852 aa11.96□□□□□ -0.49
LIMS3-203ENST00000480744 NKAIN3Q8N8D7 197 aa11.96□□□□□ -0.49
LIMS3-203ENST00000480744 OR52L2PQ8NGH6 319 aa11.96□□□□□ -0.49
LIMS3-203ENST00000480744 OR8U1Q8NH10 309 aa11.96□□□□□ -0.49
LIMS3-203ENST00000480744 Q96M66 194 aa11.96□□□□□ -0.49
LIMS3-203ENST00000480744 DUSP21Q9H596 190 aa11.96□□□□□ -0.49
LIMS3-203ENST00000480744 LANCL1O43813 399 aa11.95□□□□□ -0.5
LIMS3-203ENST00000480744 PDCD6O75340 191 aa11.95□□□□□ -0.5
LIMS3-203ENST00000480744 CA11O75493 328 aa11.95□□□□□ -0.5
LIMS3-203ENST00000480744 ELANEP08246 267 aa11.95□□□□□ -0.5
LIMS3-203ENST00000480744 MAPK3P27361 379 aaPredicted RBP11.95□□□□□ -0.5
LIMS3-203ENST00000480744 PPP1CCP36873 323 aaKnown RBP11.95□□□□□ -0.5
LIMS3-203ENST00000480744 LUMP51884 338 aaPredicted RBP11.95□□□□□ -0.5
LIMS3-203ENST00000480744 MMDQ15546 238 aa11.95□□□□□ -0.5
LIMS3-203ENST00000480744 RNLSQ5VYX0 342 aa11.95□□□□□ -0.5
LIMS3-203ENST00000480744 SIGIRRQ6IA17 410 aa11.95□□□□□ -0.5
LIMS3-203ENST00000480744 GAPTQ8N292 157 aa11.95□□□□□ -0.5
LIMS3-203ENST00000480744 FAM71E2Q8N5Q1 922 aa11.95□□□□□ -0.5
LIMS3-203ENST00000480744 OR5M8Q8NGP6 311 aa11.95□□□□□ -0.5
LIMS3-203ENST00000480744 ABHD14AQ9BUJ0 271 aa11.95□□□□□ -0.5
LIMS3-203ENST00000480744 ZMAT5Q9UDW3 170 aaKnown RBP11.95□□□□□ -0.5
LIMS3-203ENST00000480744 ZNF107Q9UII5 783 aaPredicted RBP11.95□□□□□ -0.5
LIMS3-203ENST00000480744 DNAH9Q9NYC9 4486 aa11.95□□□□□ -0.5
LIMS3-203ENST00000480744 SC5DO75845 299 aa11.94□□□□□ -0.5
LIMS3-203ENST00000480744 GLAP06280 429 aa11.94□□□□□ -0.5
LIMS3-203ENST00000480744 CDX1P47902 265 aaPredicted RBP11.94□□□□□ -0.5
LIMS3-203ENST00000480744 GP2P55259 537 aaKnown RBP11.94□□□□□ -0.5
LIMS3-203ENST00000480744 DCTN2Q13561 401 aaKnown RBP11.94□□□□□ -0.5
LIMS3-203ENST00000480744 MORN2Q502X0 79 aa11.94□□□□□ -0.5
LIMS3-203ENST00000480744 LYPD6Q86Y78 171 aa11.94□□□□□ -0.5
LIMS3-203ENST00000480744 MRPL30Q8TCC3 161 aaKnown RBP11.94□□□□□ -0.5
LIMS3-203ENST00000480744 THRSPQ92748 146 aa11.94□□□□□ -0.5
LIMS3-203ENST00000480744 KCTD7Q96MP8 289 aa11.94□□□□□ -0.5
LIMS3-203ENST00000480744 B9D2Q9BPU9 175 aa11.94□□□□□ -0.5
LIMS3-203ENST00000480744 UQCC2Q9BRT2 126 aa11.94□□□□□ -0.5
LIMS3-203ENST00000480744 CST11Q9H112 138 aa11.94□□□□□ -0.5
LIMS3-203ENST00000480744 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.94□□□□□ -0.5
LIMS3-203ENST00000480744 SCN3BQ9NY72 215 aa11.94□□□□□ -0.5
LIMS3-203ENST00000480744 IGHG4P01861 327 aa11.93□□□□□ -0.5
LIMS3-203ENST00000480744 ACTBP60709 375 aa11.93□□□□□ -0.5
LIMS3-203ENST00000480744 INSL4Q14641 139 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms