RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 ESM1Q9NQ30 184 aa16■□□□□ 0.15
LIME1-205ENST00000480139 GNG12Q9UBI6 72 aa16■□□□□ 0.15
LIME1-205ENST00000480139 RSL24D1Q9UHA3 163 aaKnown RBP16■□□□□ 0.15
LIME1-205ENST00000480139 AMMECR1Q9Y4X0 333 aaPredicted RBP16■□□□□ 0.15
LIME1-205ENST00000480139 POMT1Q9Y6A1 747 aa16■□□□□ 0.15
LIME1-205ENST00000480139 SMIM31A0A1B0GVY4 71 aa15.99■□□□□ 0.15
LIME1-205ENST00000480139 CCDC160A6NGH7 325 aa15.99■□□□□ 0.15
LIME1-205ENST00000480139 TRDCB7Z8K6 153 aa15.99■□□□□ 0.15
LIME1-205ENST00000480139 BUB1B-PAK6H3BSN5 160 aa15.99■□□□□ 0.15
LIME1-205ENST00000480139 VENTXO95231 258 aa15.99■□□□□ 0.15
LIME1-205ENST00000480139 DIRAS3O95661 229 aa15.99■□□□□ 0.15
LIME1-205ENST00000480139 EIF4EP06730 217 aaKnown RBP15.99■□□□□ 0.15
LIME1-205ENST00000480139 CEACAM3P40198 252 aa15.99■□□□□ 0.15
LIME1-205ENST00000480139 KIR2DS4P43632 304 aa15.99■□□□□ 0.15
LIME1-205ENST00000480139 GNG2P59768 71 aa15.99■□□□□ 0.15
LIME1-205ENST00000480139 KIR2DS1Q14954 304 aa15.99■□□□□ 0.15
LIME1-205ENST00000480139 LDLRAD2Q5SZI1 272 aa15.99■□□□□ 0.15
LIME1-205ENST00000480139 ZFAND2BQ8WV99 257 aa15.99■□□□□ 0.15
LIME1-205ENST00000480139 C17orf50Q8WW18 174 aa15.99■□□□□ 0.15
LIME1-205ENST00000480139 LEAP2Q969E1 77 aa15.99■□□□□ 0.15
LIME1-205ENST00000480139 AUNIPQ9H7T9 357 aa15.99■□□□□ 0.15
LIME1-205ENST00000480139 OR2S2Q9NQN1 319 aa15.99■□□□□ 0.15
LIME1-205ENST00000480139 DPM3Q9P2X0 92 aa15.99■□□□□ 0.15
LIME1-205ENST00000480139 ELF5Q9UKW6 265 aaPredicted RBP15.99■□□□□ 0.15
LIME1-205ENST00000480139 IGHV3-43A0A0B4J1X8 118 aa15.98■□□□□ 0.15
LIME1-205ENST00000480139 DNAJC9-AS1A6NH13 148 aa15.98■□□□□ 0.15
LIME1-205ENST00000480139 LEUTXA8MZ59 168 aa15.98■□□□□ 0.15
LIME1-205ENST00000480139 YPEL1O60688 119 aa15.98■□□□□ 0.15
LIME1-205ENST00000480139 RGS11O94810 467 aa15.98■□□□□ 0.15
LIME1-205ENST00000480139 IGHV3-43DP0DP04 118 aa15.98■□□□□ 0.15
LIME1-205ENST00000480139 IER3P46695 156 aa15.98■□□□□ 0.15
LIME1-205ENST00000480139 KRTAP21-3Q3LHN1 58 aa15.98■□□□□ 0.15
LIME1-205ENST00000480139 TMEM69Q5SWH9 247 aa15.98■□□□□ 0.15
LIME1-205ENST00000480139 ZNF439Q8NDP4 499 aa15.98■□□□□ 0.15
LIME1-205ENST00000480139 OR4A4PQ8NGN8 299 aa15.98■□□□□ 0.15
LIME1-205ENST00000480139 YPEL2Q96QA6 119 aa15.98■□□□□ 0.15
LIME1-205ENST00000480139 DPAGT1Q9H3H5 408 aa15.98■□□□□ 0.15
LIME1-205ENST00000480139 NDUFA13Q9P0J0 144 aa15.98■□□□□ 0.15
LIME1-205ENST00000480139 VGLL3A8MV65 326 aa15.97■□□□□ 0.15
LIME1-205ENST00000480139 OOSP1A8MZH6 123 aa15.97■□□□□ 0.15
LIME1-205ENST00000480139 LY6LH3BQJ8 138 aa15.97■□□□□ 0.15
LIME1-205ENST00000480139 HOXA3O43365 443 aaPredicted RBP15.97■□□□□ 0.15
LIME1-205ENST00000480139 HPGDSO60760 199 aa15.97■□□□□ 0.15
LIME1-205ENST00000480139 ELK1P19419 428 aa15.97■□□□□ 0.15
LIME1-205ENST00000480139 MNDAP41218 407 aa15.97■□□□□ 0.15
LIME1-205ENST00000480139 UBA52P62987 128 aaKnown RBP15.97■□□□□ 0.15
LIME1-205ENST00000480139 SLC9A3R2Q15599 337 aa15.97■□□□□ 0.15
LIME1-205ENST00000480139 MORN2Q502X0 79 aa15.97■□□□□ 0.15
LIME1-205ENST00000480139 SLC25A48Q6ZT89 311 aaKnown RBP15.97■□□□□ 0.15
LIME1-205ENST00000480139 NUDCD2Q8WVJ2 157 aa15.97■□□□□ 0.15
LIME1-205ENST00000480139 OCSTAMPQ9BR26 566 aa15.97■□□□□ 0.15
LIME1-205ENST00000480139 TRIM77I1YAP6 450 aa15.96■□□□□ 0.15
LIME1-205ENST00000480139 FABP7O15540 132 aa15.96■□□□□ 0.15
LIME1-205ENST00000480139 SSX5O60225 188 aa15.96■□□□□ 0.15
LIME1-205ENST00000480139 IGHV3-7P01780 117 aa15.96■□□□□ 0.15
LIME1-205ENST00000480139 RNASE1P07998 156 aaKnown RBP15.96■□□□□ 0.15
LIME1-205ENST00000480139 SCTP09683 121 aa15.96■□□□□ 0.15
LIME1-205ENST00000480139 GNG10P50151 68 aa15.96■□□□□ 0.15
LIME1-205ENST00000480139 DYNLT3P51808 116 aa15.96■□□□□ 0.15
LIME1-205ENST00000480139 TAS2R20P59543 309 aa15.96■□□□□ 0.15
LIME1-205ENST00000480139 MADCAM1Q13477 382 aa15.96■□□□□ 0.15
LIME1-205ENST00000480139 GNMTQ14749 295 aa15.96■□□□□ 0.15
LIME1-205ENST00000480139 SSX2Q16385 188 aa15.96■□□□□ 0.15
LIME1-205ENST00000480139 LRRC75BQ2VPJ9 315 aa15.96■□□□□ 0.15
LIME1-205ENST00000480139 C5orf24Q7Z6I8 188 aa15.96■□□□□ 0.15
LIME1-205ENST00000480139 DYNAPQ8N1N2 210 aa15.96■□□□□ 0.15
LIME1-205ENST00000480139 OR52L2PQ8NGH6 319 aa15.96■□□□□ 0.15
LIME1-205ENST00000480139 OR10V1Q8NGI7 309 aa15.96■□□□□ 0.15
LIME1-205ENST00000480139 OR10X1Q8NGY0 326 aa15.96■□□□□ 0.15
LIME1-205ENST00000480139 OR5R1Q8NH85 324 aa15.96■□□□□ 0.15
LIME1-205ENST00000480139 IL1F10Q8WWZ1 152 aa15.96■□□□□ 0.15
LIME1-205ENST00000480139 CABLES2Q9BTV7 478 aa15.96■□□□□ 0.15
LIME1-205ENST00000480139 SLIRPQ9GZT3 109 aaKnown RBP15.96■□□□□ 0.15
LIME1-205ENST00000480139 ZNF230Q9UIE0 474 aaPredicted RBP15.96■□□□□ 0.15
LIME1-205ENST00000480139 ATRQ13535 2644 aa15.95■□□□□ 0.14
LIME1-205ENST00000480139 TPPPO94811 219 aa15.95■□□□□ 0.14
LIME1-205ENST00000480139 ZBTB25P24278 435 aa15.95■□□□□ 0.14
LIME1-205ENST00000480139 PPP1CCP36873 323 aaKnown RBP15.95■□□□□ 0.14
LIME1-205ENST00000480139 TPTE2P1Q5T6R2 138 aa15.95■□□□□ 0.14
LIME1-205ENST00000480139 FAM53AQ6NSI3 398 aaPredicted RBP15.95■□□□□ 0.14
LIME1-205ENST00000480139 IGKV1-6A0A0C4DH72 117 aa15.94■□□□□ 0.14
LIME1-205ENST00000480139 ITGB1BP1O14713 200 aa15.94■□□□□ 0.14
LIME1-205ENST00000480139 IGHV4-59P01825 116 aa15.94■□□□□ 0.14
LIME1-205ENST00000480139 IL3RAP26951 378 aa15.94■□□□□ 0.14
LIME1-205ENST00000480139 CBX5P45973 191 aa15.94■□□□□ 0.14
LIME1-205ENST00000480139 ZNF134P52741 427 aa15.94■□□□□ 0.14
LIME1-205ENST00000480139 ZNF137PP52743 207 aa15.94■□□□□ 0.14
LIME1-205ENST00000480139 HERPUD1Q15011 391 aa15.94■□□□□ 0.14
LIME1-205ENST00000480139 CT45A1Q5HYN5 189 aa15.94■□□□□ 0.14
LIME1-205ENST00000480139 CCDC144NLQ6NUI1 221 aa15.94■□□□□ 0.14
LIME1-205ENST00000480139 IZUMO1Q8IYV9 350 aa15.94■□□□□ 0.14
LIME1-205ENST00000480139 CT45A3Q8NHU0 189 aa15.94■□□□□ 0.14
LIME1-205ENST00000480139 SSX3Q99909 188 aa15.94■□□□□ 0.14
LIME1-205ENST00000480139 ABHD14AQ9BUJ0 271 aa15.94■□□□□ 0.14
LIME1-205ENST00000480139 NXF2Q9GZY0 626 aaKnown RBP15.94■□□□□ 0.14
LIME1-205ENST00000480139 TOLLIPQ9H0E2 274 aa15.94■□□□□ 0.14
LIME1-205ENST00000480139 SLC23A1Q9UHI7 598 aa15.94■□□□□ 0.14
LIME1-205ENST00000480139 ADAM30Q9UKF2 790 aa15.94■□□□□ 0.14
LIME1-205ENST00000480139 HILPDAQ9Y5L2 63 aa15.94■□□□□ 0.14
LIME1-205ENST00000480139 A0A1W2PPE3 182 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms