RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 A0A087WUJ7 227 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 A0A0B4J2E0 115 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 A0A0J9YXY3 114 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 MDFIC2A0A1B0GVS7 189 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 A0A1B0GWA3 101 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 A0A1B0GX12 115 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 DPRXA6NFQ7 191 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 MRASO14807 208 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 MRPL33O75394 65 aaKnown RBP3.71□□□□□ -1.82
UPF3A-205ENST00000479712 DEDDO75618 318 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 MMP23AO75900 390 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 IFNA14P01570 189 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 CRYGBP07316 175 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 TACSTD2P09758 323 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 GKN3PP0CG01 181 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 KITLGP21583 273 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 IL32P24001 234 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 GABRR1P24046 479 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 COX7A1P24310 79 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 GLP1RP43220 463 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 YAP1P46937 504 aaKnown RBP3.71□□□□□ -1.82
UPF3A-205ENST00000479712 GZMMP51124 257 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 APOC4P55056 127 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 SH3BGRP55822 239 aaPredicted RBP3.71□□□□□ -1.82
UPF3A-205ENST00000479712 RGS8P57771 180 aaPredicted RBP3.71□□□□□ -1.82
UPF3A-205ENST00000479712 OR2B6P58173 313 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 NCALDP61601 193 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 RCN1Q15293 331 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 TIMM23BQ5SRD1 257 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 C1orf140Q5VVS0 124 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 NANOGP8Q6NSW7 305 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 METAP1DQ6UB28 335 aaPredicted RBP3.71□□□□□ -1.82
UPF3A-205ENST00000479712 ZNF546Q86UE3 836 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 C10orf111Q8N326 155 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 ATP6V1C2Q8NEY4 427 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 OR52E4Q8NGH9 312 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 C10orf82Q8WW14 230 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 MAL2Q969L2 176 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 HOPXQ9BPY8 73 aaPredicted RBP3.71□□□□□ -1.82
UPF3A-205ENST00000479712 ZNF426Q9BUY5 554 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 LINC00470Q9BZP3 86 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 OR11A1Q9GZK7 315 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 NSRP1Q9H0G5 558 aaKnown RBP3.71□□□□□ -1.82
UPF3A-205ENST00000479712 NANOGQ9H9S0 305 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 TMEM27Q9HBJ8 222 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 RPS6KB2Q9UBS0 482 aa3.71□□□□□ -1.82
UPF3A-205ENST00000479712 NOSIPQ9Y314 301 aaKnown RBP3.71□□□□□ -1.82
UPF3A-205ENST00000479712 CSDC2Q9Y534 153 aaKnown RBP3.71□□□□□ -1.82
UPF3A-205ENST00000479712 TRAPPC13A5PLN9 417 aa3.7□□□□□ -1.82
UPF3A-205ENST00000479712 OR5H1A6NKK0 313 aa3.7□□□□□ -1.82
UPF3A-205ENST00000479712 CENPBD1B2RD01 187 aa3.7□□□□□ -1.82
UPF3A-205ENST00000479712 E7EQL1 145 aa3.7□□□□□ -1.82
UPF3A-205ENST00000479712 RPL36A-HNRNPH2H7BZ11 118 aa3.7□□□□□ -1.82
UPF3A-205ENST00000479712 M0QX08 132 aa3.7□□□□□ -1.82
UPF3A-205ENST00000479712 AIM2O14862 343 aa3.7□□□□□ -1.82
UPF3A-205ENST00000479712 AGPAT2O15120 278 aa3.7□□□□□ -1.82
UPF3A-205ENST00000479712 RNF13O43567 381 aa3.7□□□□□ -1.82
UPF3A-205ENST00000479712 CHP2O43745 196 aa3.7□□□□□ -1.82
UPF3A-205ENST00000479712 MGRN1O60291 552 aa3.7□□□□□ -1.82
UPF3A-205ENST00000479712 TPST1O60507 370 aa3.7□□□□□ -1.82
UPF3A-205ENST00000479712 GGT1P19440 569 aa3.7□□□□□ -1.82
UPF3A-205ENST00000479712 TBPP20226 339 aa3.7□□□□□ -1.82
UPF3A-205ENST00000479712 RBM34P42696 430 aaKnown RBP3.7□□□□□ -1.82
UPF3A-205ENST00000479712 VDAC2P45880 294 aaPredicted RBP3.7□□□□□ -1.82
UPF3A-205ENST00000479712 MTPNP58546 118 aa3.7□□□□□ -1.82
UPF3A-205ENST00000479712 OR1Q1Q15612 314 aa3.7□□□□□ -1.82
UPF3A-205ENST00000479712 OR7A5Q15622 319 aa3.7□□□□□ -1.82
UPF3A-205ENST00000479712 TSC22D1Q15714 1073 aa3.7□□□□□ -1.82
UPF3A-205ENST00000479712 ATP6AP1Q15904 470 aa3.7□□□□□ -1.82
UPF3A-205ENST00000479712 BHLHA15Q7RTS1 189 aaPredicted RBP3.7□□□□□ -1.82
UPF3A-205ENST00000479712 ZNF433Q8N7K0 673 aaPredicted RBP3.7□□□□□ -1.82
UPF3A-205ENST00000479712 ZIC4Q8N9L1 334 aa3.7□□□□□ -1.82
UPF3A-205ENST00000479712 NKAPP1Q8N9T2 125 aa3.7□□□□□ -1.82
UPF3A-205ENST00000479712 GPR32P1Q8NGA4 272 aa3.7□□□□□ -1.82
UPF3A-205ENST00000479712 OR10A6Q8NH74 314 aa3.7□□□□□ -1.82
UPF3A-205ENST00000479712 OR9G1Q8NH87 305 aa3.7□□□□□ -1.82
UPF3A-205ENST00000479712 DCUN1D4Q92564 292 aa3.7□□□□□ -1.82
UPF3A-205ENST00000479712 S100PBPQ96BU1 408 aa3.7□□□□□ -1.82
UPF3A-205ENST00000479712 MUCL1Q96DR8 90 aa3.7□□□□□ -1.82
UPF3A-205ENST00000479712 CMTM5Q96DZ9 223 aa3.7□□□□□ -1.82
UPF3A-205ENST00000479712 TECTBQ96PL2 329 aa3.7□□□□□ -1.82
UPF3A-205ENST00000479712 ECSITQ9BQ95 431 aa3.7□□□□□ -1.82
UPF3A-205ENST00000479712 YTHDF1Q9BYJ9 559 aaKnown RBP3.7□□□□□ -1.82
UPF3A-205ENST00000479712 SLC25A22Q9H936 323 aa3.7□□□□□ -1.82
UPF3A-205ENST00000479712 EFCAB1Q9HAE3 211 aa3.7□□□□□ -1.82
UPF3A-205ENST00000479712 TP53TG3Q9ULZ0 132 aa3.7□□□□□ -1.82
UPF3A-205ENST00000479712 IGKV1D-42A0A075B6H8 117 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 ARPC4-TTLL3A0A0A6YYG9 625 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 IGHV3-15A0A0B4J1V0 119 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 GMNCA6NCL1 334 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 CLDN34H7C241 214 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 TRAF3IP2O43734 574 aaPredicted RBP3.69□□□□□ -1.82
UPF3A-205ENST00000479712 ENTPD5O75356 428 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 OR5F1O95221 314 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 BGLAPP02818 100 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 COX4I1P13073 169 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 ZNF43P17038 809 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 GTF2E2P29084 291 aaKnown RBP3.69□□□□□ -1.82
UPF3A-205ENST00000479712 IFNA8P32881 189 aa3.69□□□□□ -1.82
UPF3A-205ENST00000479712 KDELR2P33947 212 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms