RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 HMGN3Q15651 99 aa12.34□□□□□ -0.43
COL16A1-211ENST00000479100 TMEM69Q5SWH9 247 aa12.34□□□□□ -0.43
COL16A1-211ENST00000479100 HACD4Q5VWC8 232 aa12.34□□□□□ -0.43
COL16A1-211ENST00000479100 ZNF554Q86TJ5 538 aa12.34□□□□□ -0.43
COL16A1-211ENST00000479100 OR52M1Q8NGK5 317 aa12.34□□□□□ -0.43
COL16A1-211ENST00000479100 RSL24D1Q9UHA3 163 aaKnown RBP12.34□□□□□ -0.43
COL16A1-211ENST00000479100 TBL2Q9Y4P3 447 aaKnown RBP12.34□□□□□ -0.43
COL16A1-211ENST00000479100 A0A0A6YYJ9 748 aa12.33□□□□□ -0.44
COL16A1-211ENST00000479100 SMIM31A0A1B0GVY4 71 aa12.33□□□□□ -0.44
COL16A1-211ENST00000479100 TRDCB7Z8K6 153 aa12.33□□□□□ -0.44
COL16A1-211ENST00000479100 J3QR06 171 aa12.33□□□□□ -0.44
COL16A1-211ENST00000479100 RGS5O15539 181 aa12.33□□□□□ -0.44
COL16A1-211ENST00000479100 HOXA3O43365 443 aaPredicted RBP12.33□□□□□ -0.44
COL16A1-211ENST00000479100 XRCC3O43542 346 aa12.33□□□□□ -0.44
COL16A1-211ENST00000479100 APOA1P02647 267 aa12.33□□□□□ -0.44
COL16A1-211ENST00000479100 MELTFP08582 738 aa12.33□□□□□ -0.44
COL16A1-211ENST00000479100 SCTP09683 121 aa12.33□□□□□ -0.44
COL16A1-211ENST00000479100 ELK1P19419 428 aa12.33□□□□□ -0.44
COL16A1-211ENST00000479100 PPP1CCP36873 323 aaKnown RBP12.33□□□□□ -0.44
COL16A1-211ENST00000479100 LOXL3P58215 753 aa12.33□□□□□ -0.44
COL16A1-211ENST00000479100 HILS1P60008 231 aa12.33□□□□□ -0.44
COL16A1-211ENST00000479100 PITPNAQ00169 270 aa12.33□□□□□ -0.44
COL16A1-211ENST00000479100 MADCAM1Q13477 382 aa12.33□□□□□ -0.44
COL16A1-211ENST00000479100 GNMTQ14749 295 aa12.33□□□□□ -0.44
COL16A1-211ENST00000479100 SSX2Q16385 188 aa12.33□□□□□ -0.44
COL16A1-211ENST00000479100 PNLIPRP3Q17RR3 467 aa12.33□□□□□ -0.44
COL16A1-211ENST00000479100 HLA-DRB5Q30154 266 aa12.33□□□□□ -0.44
COL16A1-211ENST00000479100 TMEM30BQ3MIR4 351 aa12.33□□□□□ -0.44
COL16A1-211ENST00000479100 MINOS1Q5TGZ0 78 aa12.33□□□□□ -0.44
COL16A1-211ENST00000479100 Q6YL49 198 aa12.33□□□□□ -0.44
COL16A1-211ENST00000479100 BEND2Q8NDZ0 799 aa12.33□□□□□ -0.44
COL16A1-211ENST00000479100 OR4P4Q8NGL7 312 aa12.33□□□□□ -0.44
COL16A1-211ENST00000479100 OR10X1Q8NGY0 326 aa12.33□□□□□ -0.44
COL16A1-211ENST00000479100 AJUBAQ96IF1 538 aa12.33□□□□□ -0.44
COL16A1-211ENST00000479100 ST6GALNAC5Q9BVH7 336 aa12.33□□□□□ -0.44
COL16A1-211ENST00000479100 RBM38Q9H0Z9 239 aaKnown RBP12.33□□□□□ -0.44
COL16A1-211ENST00000479100 MMP28Q9H239 520 aa12.33□□□□□ -0.44
COL16A1-211ENST00000479100 AUNIPQ9H7T9 357 aa12.33□□□□□ -0.44
COL16A1-211ENST00000479100 ESM1Q9NQ30 184 aa12.33□□□□□ -0.44
COL16A1-211ENST00000479100 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.33□□□□□ -0.44
COL16A1-211ENST00000479100 CCDC59Q9P031 241 aaKnown RBP12.33□□□□□ -0.44
COL16A1-211ENST00000479100 MRPS7Q9Y2R9 242 aaKnown RBP12.33□□□□□ -0.44
COL16A1-211ENST00000479100 MINOS1-NBL1R4GNA1 71 aa12.33□□□□□ -0.44
COL16A1-211ENST00000479100 DNAJC9-AS1A6NH13 148 aa12.32□□□□□ -0.44
COL16A1-211ENST00000479100 POM121CA8CG34 1229 aa12.32□□□□□ -0.44
COL16A1-211ENST00000479100 HSPA12AO43301 675 aa12.32□□□□□ -0.44
COL16A1-211ENST00000479100 IGLV1-47P01700 117 aa12.32□□□□□ -0.44
COL16A1-211ENST00000479100 PTHLHP12272 177 aa12.32□□□□□ -0.44
COL16A1-211ENST00000479100 TAS2R20P59543 309 aa12.32□□□□□ -0.44
COL16A1-211ENST00000479100 HTD2P86397 168 aa12.32□□□□□ -0.44
COL16A1-211ENST00000479100 TUSC1Q2TAM9 212 aa12.32□□□□□ -0.44
COL16A1-211ENST00000479100 LDLRAD2Q5SZI1 272 aa12.32□□□□□ -0.44
COL16A1-211ENST00000479100 DYNAPQ8N1N2 210 aa12.32□□□□□ -0.44
COL16A1-211ENST00000479100 ZDHHC22Q8N966 263 aa12.32□□□□□ -0.44
COL16A1-211ENST00000479100 MALSU1Q96EH3 234 aa12.32□□□□□ -0.44
COL16A1-211ENST00000479100 CMTM3Q96MX0 182 aa12.32□□□□□ -0.44
COL16A1-211ENST00000479100 DCUN1D5Q9BTE7 237 aa12.32□□□□□ -0.44
COL16A1-211ENST00000479100 DPM3Q9P2X0 92 aa12.32□□□□□ -0.44
COL16A1-211ENST00000479100 SLC23A1Q9UHI7 598 aa12.32□□□□□ -0.44
COL16A1-211ENST00000479100 JPT1Q9UK76 154 aa12.32□□□□□ -0.44
COL16A1-211ENST00000479100 AMMECR1Q9Y4X0 333 aaPredicted RBP12.32□□□□□ -0.44
COL16A1-211ENST00000479100 BTBD17A6NE02 478 aa12.31□□□□□ -0.44
COL16A1-211ENST00000479100 LEUTXA8MZ59 168 aa12.31□□□□□ -0.44
COL16A1-211ENST00000479100 BUB1B-PAK6H3BSN5 160 aa12.31□□□□□ -0.44
COL16A1-211ENST00000479100 FABP7O15540 132 aa12.31□□□□□ -0.44
COL16A1-211ENST00000479100 SSX5O60225 188 aa12.31□□□□□ -0.44
COL16A1-211ENST00000479100 RGS11O94810 467 aa12.31□□□□□ -0.44
COL16A1-211ENST00000479100 IGHV4-59P01825 116 aa12.31□□□□□ -0.44
COL16A1-211ENST00000479100 DTYMKP23919 212 aa12.31□□□□□ -0.44
COL16A1-211ENST00000479100 CEACAM3P40198 252 aa12.31□□□□□ -0.44
COL16A1-211ENST00000479100 KIR2DS4P43632 304 aa12.31□□□□□ -0.44
COL16A1-211ENST00000479100 KIR2DS1Q14954 304 aa12.31□□□□□ -0.44
COL16A1-211ENST00000479100 SLC9A3R2Q15599 337 aa12.31□□□□□ -0.44
COL16A1-211ENST00000479100 LDLRAD3Q86YD5 345 aa12.31□□□□□ -0.44
COL16A1-211ENST00000479100 SSMEM1Q8WWF3 244 aa12.31□□□□□ -0.44
COL16A1-211ENST00000479100 CREB3L1Q96BA8 519 aa12.31□□□□□ -0.44
COL16A1-211ENST00000479100 PRDM13Q9H4Q3 707 aa12.31□□□□□ -0.44
COL16A1-211ENST00000479100 ABCB10Q9NRK6 738 aa12.31□□□□□ -0.44
COL16A1-211ENST00000479100 OR1A1Q9P1Q5 309 aa12.31□□□□□ -0.44
COL16A1-211ENST00000479100 DPPA5A6NC42 116 aa12.3□□□□□ -0.44
COL16A1-211ENST00000479100 MEIS3P1A6NDR6 274 aa12.3□□□□□ -0.44
COL16A1-211ENST00000479100 H3BUX3 64 aa12.3□□□□□ -0.44
COL16A1-211ENST00000479100 TRIM77I1YAP6 450 aa12.3□□□□□ -0.44
COL16A1-211ENST00000479100 CTDSP2O14595 271 aa12.3□□□□□ -0.44
COL16A1-211ENST00000479100 BET1O15155 118 aa12.3□□□□□ -0.44
COL16A1-211ENST00000479100 SLC31A2O15432 143 aa12.3□□□□□ -0.44
COL16A1-211ENST00000479100 FCER2P06734 321 aa12.3□□□□□ -0.44
COL16A1-211ENST00000479100 GSTT2P0CG29 244 aa12.3□□□□□ -0.44
COL16A1-211ENST00000479100 GSTT2BP0CG30 244 aa12.3□□□□□ -0.44
COL16A1-211ENST00000479100 IER3P46695 156 aa12.3□□□□□ -0.44
COL16A1-211ENST00000479100 UBA52P62987 128 aaKnown RBP12.3□□□□□ -0.44
COL16A1-211ENST00000479100 LRRC75BQ2VPJ9 315 aa12.3□□□□□ -0.44
COL16A1-211ENST00000479100 MORN2Q502X0 79 aa12.3□□□□□ -0.44
COL16A1-211ENST00000479100 TPTE2P1Q5T6R2 138 aa12.3□□□□□ -0.44
COL16A1-211ENST00000479100 STEAP3Q658P3 488 aa12.3□□□□□ -0.44
COL16A1-211ENST00000479100 OR4A4PQ8NGN8 299 aa12.3□□□□□ -0.44
COL16A1-211ENST00000479100 MCFD2Q8NI22 146 aa12.3□□□□□ -0.44
COL16A1-211ENST00000479100 RPEQ96AT9 228 aa12.3□□□□□ -0.44
COL16A1-211ENST00000479100 SSX3Q99909 188 aa12.3□□□□□ -0.44
COL16A1-211ENST00000479100 C6orf62Q9GZU0 229 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms