RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 SPIN3Q5JUX0 258 aa9.52□□□□□ -0.89
LRRFIP1-211ENST00000478958 CST9LP1Q5W188 147 aa9.52□□□□□ -0.89
LRRFIP1-211ENST00000478958 TEX43Q6ZNM6 134 aa9.52□□□□□ -0.89
LRRFIP1-211ENST00000478958 SLC25A45Q8N413 288 aa9.52□□□□□ -0.89
LRRFIP1-211ENST00000478958 OR2G3Q8NGZ4 309 aa9.52□□□□□ -0.89
LRRFIP1-211ENST00000478958 OR2V1Q8NHB1 315 aa9.52□□□□□ -0.89
LRRFIP1-211ENST00000478958 PP6455Q8WZ26 134 aa9.52□□□□□ -0.89
LRRFIP1-211ENST00000478958 LOXL4Q96JB6 756 aa9.52□□□□□ -0.89
LRRFIP1-211ENST00000478958 CHRNA10Q9GZZ6 450 aa9.52□□□□□ -0.89
LRRFIP1-211ENST00000478958 WNT16Q9UBV4 365 aa9.52□□□□□ -0.89
LRRFIP1-211ENST00000478958 ST3GAL6Q9Y274 331 aa9.52□□□□□ -0.89
LRRFIP1-211ENST00000478958 RNF115Q9Y4L5 304 aa9.52□□□□□ -0.89
LRRFIP1-211ENST00000478958 TRAV30A0A087WSZ9 112 aa9.51□□□□□ -0.89
LRRFIP1-211ENST00000478958 ETV2O00321 342 aaPredicted RBP9.51□□□□□ -0.89
LRRFIP1-211ENST00000478958 GPR137BO60478 399 aa9.51□□□□□ -0.89
LRRFIP1-211ENST00000478958 SCRG1O75711 98 aa9.51□□□□□ -0.89
LRRFIP1-211ENST00000478958 MMP9P14780 707 aa9.51□□□□□ -0.89
LRRFIP1-211ENST00000478958 GNMTQ14749 295 aa9.51□□□□□ -0.89
LRRFIP1-211ENST00000478958 ICAM4Q14773 271 aa9.51□□□□□ -0.89
LRRFIP1-211ENST00000478958 MPV17LQ2QL34 196 aa9.51□□□□□ -0.89
LRRFIP1-211ENST00000478958 TRIM61Q5EBN2 209 aa9.51□□□□□ -0.89
LRRFIP1-211ENST00000478958 PRR27Q6MZM9 219 aa9.51□□□□□ -0.89
LRRFIP1-211ENST00000478958 TM2D1Q9BX74 207 aa9.51□□□□□ -0.89
LRRFIP1-211ENST00000478958 LAMTOR2Q9Y2Q5 125 aa9.51□□□□□ -0.89
LRRFIP1-211ENST00000478958 IGHV2OR16-5A0A0B4J2B6 119 aa9.51□□□□□ -0.89
LRRFIP1-211ENST00000478958 HSPB6O14558 160 aa9.51□□□□□ -0.89
LRRFIP1-211ENST00000478958 ZFAND5O76080 213 aa9.51□□□□□ -0.89
LRRFIP1-211ENST00000478958 DUSP1P28562 367 aa9.51□□□□□ -0.89
LRRFIP1-211ENST00000478958 SMIM21Q3B7S5 101 aa9.51□□□□□ -0.89
LRRFIP1-211ENST00000478958 ACOT6Q3I5F7 207 aaPredicted RBP9.51□□□□□ -0.89
LRRFIP1-211ENST00000478958 RHBDD2Q6NTF9 364 aa9.51□□□□□ -0.89
LRRFIP1-211ENST00000478958 PRSS57Q6UWY2 283 aa9.51□□□□□ -0.89
LRRFIP1-211ENST00000478958 BORCS8Q96FH0 119 aa9.51□□□□□ -0.89
LRRFIP1-211ENST00000478958 RASL10BQ96S79 203 aa9.51□□□□□ -0.89
LRRFIP1-211ENST00000478958 ULBP2Q9BZM5 246 aa9.51□□□□□ -0.89
LRRFIP1-211ENST00000478958 ZNF442Q9H7R0 627 aa9.51□□□□□ -0.89
LRRFIP1-211ENST00000478958 TMEM9BQ9NQ34 198 aa9.51□□□□□ -0.89
LRRFIP1-211ENST00000478958 LYRM2Q9NU23 88 aaPredicted RBP9.51□□□□□ -0.89
LRRFIP1-211ENST00000478958 KIAA1456Q9P272 454 aa9.51□□□□□ -0.89
LRRFIP1-211ENST00000478958 CLEC18AA5D8T8 446 aa9.5□□□□□ -0.89
LRRFIP1-211ENST00000478958 NKX2-6A6NCS4 301 aa9.5□□□□□ -0.89
LRRFIP1-211ENST00000478958 K7N7A8 449 aa9.5□□□□□ -0.89
LRRFIP1-211ENST00000478958 SSSCA1O60232 199 aa9.5□□□□□ -0.89
LRRFIP1-211ENST00000478958 OR7C1O76099 320 aaPredicted RBP9.5□□□□□ -0.89
LRRFIP1-211ENST00000478958 BMP5P22003 454 aa9.5□□□□□ -0.89
LRRFIP1-211ENST00000478958 ZNF133P52736 654 aaPredicted RBP9.5□□□□□ -0.89
LRRFIP1-211ENST00000478958 ERVS71-1P61550 626 aa9.5□□□□□ -0.89
LRRFIP1-211ENST00000478958 RUNX1Q01196 453 aa9.5□□□□□ -0.89
LRRFIP1-211ENST00000478958 PNRC1Q12796 327 aaPredicted RBP9.5□□□□□ -0.89
LRRFIP1-211ENST00000478958 FAM180AQ6UWF9 173 aa9.5□□□□□ -0.89
LRRFIP1-211ENST00000478958 LIAT1Q6ZQX7 453 aa9.5□□□□□ -0.89
LRRFIP1-211ENST00000478958 SYT13Q7L8C5 426 aa9.5□□□□□ -0.89
LRRFIP1-211ENST00000478958 NECAP1Q8NC96 275 aa9.5□□□□□ -0.89
LRRFIP1-211ENST00000478958 CLEC18CQ8NCF0 446 aa9.5□□□□□ -0.89
LRRFIP1-211ENST00000478958 APH1AQ96BI3 265 aa9.5□□□□□ -0.89
LRRFIP1-211ENST00000478958 TXN2Q99757 166 aa9.5□□□□□ -0.89
LRRFIP1-211ENST00000478958 DHHO43323 396 aa9.5□□□□□ -0.89
LRRFIP1-211ENST00000478958 MMP23AO75900 390 aa9.5□□□□□ -0.89
LRRFIP1-211ENST00000478958 GLB1P16278 677 aa9.5□□□□□ -0.89
LRRFIP1-211ENST00000478958 CD33P20138 364 aa9.5□□□□□ -0.89
LRRFIP1-211ENST00000478958 ATP6V0CP27449 155 aa9.5□□□□□ -0.89
LRRFIP1-211ENST00000478958 NXPH1P58417 271 aa9.5□□□□□ -0.89
LRRFIP1-211ENST00000478958 HERV-K104P61576 105 aa9.5□□□□□ -0.89
LRRFIP1-211ENST00000478958 EWSR1Q01844 656 aaKnown RBP eCLIP9.5□□□□□ -0.89
LRRFIP1-211ENST00000478958 HIST3H3Q16695 136 aa9.5□□□□□ -0.89
LRRFIP1-211ENST00000478958 WFDC8Q8IUA0 241 aa9.5□□□□□ -0.89
LRRFIP1-211ENST00000478958 IL22RA1Q8N6P7 574 aa9.5□□□□□ -0.89
LRRFIP1-211ENST00000478958 OR4D5Q8NGN0 318 aa9.5□□□□□ -0.89
LRRFIP1-211ENST00000478958 FAM216AQ8WUB2 273 aa9.5□□□□□ -0.89
LRRFIP1-211ENST00000478958 OR6C3Q9NZP0 311 aa9.5□□□□□ -0.89
LRRFIP1-211ENST00000478958 IGKV1-12A0A0C4DH73 117 aa9.49□□□□□ -0.89
LRRFIP1-211ENST00000478958 IGKV1D-12P01611 117 aa9.49□□□□□ -0.89
LRRFIP1-211ENST00000478958 AADACP22760 399 aa9.49□□□□□ -0.89
LRRFIP1-211ENST00000478958 HNRNPA3P51991 378 aaKnown RBP9.49□□□□□ -0.89
LRRFIP1-211ENST00000478958 RPL23AP62750 156 aaKnown RBP9.49□□□□□ -0.89
LRRFIP1-211ENST00000478958 SHBQ15464 509 aa9.49□□□□□ -0.89
LRRFIP1-211ENST00000478958 MCEMP1Q8IX19 187 aa9.49□□□□□ -0.89
LRRFIP1-211ENST00000478958 LGI3Q8N145 548 aa9.49□□□□□ -0.89
LRRFIP1-211ENST00000478958 ZNF709Q8N972 641 aa9.49□□□□□ -0.89
LRRFIP1-211ENST00000478958 VN1R17PQ8TDU5 208 aa9.49□□□□□ -0.89
LRRFIP1-211ENST00000478958 PINX1Q96BK5 328 aaKnown RBP9.49□□□□□ -0.89
LRRFIP1-211ENST00000478958 MSI2Q96DH6 328 aaKnown RBP9.49□□□□□ -0.89
LRRFIP1-211ENST00000478958 SPACA9Q96E40 222 aaPredicted RBP9.49□□□□□ -0.89
LRRFIP1-211ENST00000478958 CTDSP1Q9GZU7 261 aa9.49□□□□□ -0.89
LRRFIP1-211ENST00000478958 MEGF9Q9H1U4 602 aa9.49□□□□□ -0.89
LRRFIP1-211ENST00000478958 EML6Q6ZMW3 1958 aa9.49□□□□□ -0.89
LRRFIP1-211ENST00000478958 PRRC2CQ9Y520 2896 aaKnown RBP9.49□□□□□ -0.89
LRRFIP1-211ENST00000478958 B4GALT1P15291 398 aa9.49□□□□□ -0.89
LRRFIP1-211ENST00000478958 TNFSF4P23510 183 aa9.49□□□□□ -0.89
LRRFIP1-211ENST00000478958 ARR3P36575 388 aa9.49□□□□□ -0.89
LRRFIP1-211ENST00000478958 ECI1P42126 302 aa9.49□□□□□ -0.89
LRRFIP1-211ENST00000478958 CNN1P51911 297 aaKnown RBP9.49□□□□□ -0.89
LRRFIP1-211ENST00000478958 ARF6P62330 175 aa9.49□□□□□ -0.89
LRRFIP1-211ENST00000478958 RAB11AP62491 216 aa9.49□□□□□ -0.89
LRRFIP1-211ENST00000478958 CXorf66Q5JRM2 361 aaPredicted RBP9.49□□□□□ -0.89
LRRFIP1-211ENST00000478958 OR2C3Q8N628 320 aa9.49□□□□□ -0.89
LRRFIP1-211ENST00000478958 PIGCQ92535 297 aa9.49□□□□□ -0.89
LRRFIP1-211ENST00000478958 SPTSSAQ969W0 71 aa9.49□□□□□ -0.89
LRRFIP1-211ENST00000478958 TMEM106BQ9NUM4 274 aa9.49□□□□□ -0.89
LRRFIP1-211ENST00000478958 RNF212BA8MTL3 300 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms