RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 ZNF501Q96CX3 271 aaPredicted RBP18.2■□□□□ 0.5
SDF4-206ENST00000478938 FGF22Q9HCT0 170 aa18.2■□□□□ 0.5
SDF4-206ENST00000478938 SERGEFQ9UGK8 458 aa18.2■□□□□ 0.5
SDF4-206ENST00000478938 DLX2Q07687 328 aaPredicted RBP18.19■□□□□ 0.5
SDF4-206ENST00000478938 GPM6BQ13491 265 aa18.19■□□□□ 0.5
SDF4-206ENST00000478938 RSPO4Q2I0M5 234 aaPredicted RBP18.19■□□□□ 0.5
SDF4-206ENST00000478938 CCL4L1Q8NHW4 92 aa18.19■□□□□ 0.5
SDF4-206ENST00000478938 UHRF2Q96PU4 802 aa18.19■□□□□ 0.5
SDF4-206ENST00000478938 CCDC3Q9BQI4 270 aa18.19■□□□□ 0.5
SDF4-206ENST00000478938 NUDT22Q9BRQ3 303 aa18.19■□□□□ 0.5
SDF4-206ENST00000478938 MRPL18Q9H0U6 180 aaKnown RBP18.19■□□□□ 0.5
SDF4-206ENST00000478938 SLC17A4Q9Y2C5 497 aa18.19■□□□□ 0.5
SDF4-206ENST00000478938 MRPS16Q9Y3D3 137 aaKnown RBP18.19■□□□□ 0.5
SDF4-206ENST00000478938 ADAMTS9Q9P2N4 1935 aa18.19■□□□□ 0.5
SDF4-206ENST00000478938 ODAMA1E959 279 aa18.19■□□□□ 0.5
SDF4-206ENST00000478938 OPN1LWP04000 364 aa18.19■□□□□ 0.5
SDF4-206ENST00000478938 GPX1P07203 203 aa18.19■□□□□ 0.5
SDF4-206ENST00000478938 ADH5P11766 374 aa18.19■□□□□ 0.5
SDF4-206ENST00000478938 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.19■□□□□ 0.5
SDF4-206ENST00000478938 Q6ZPA2 131 aa18.19■□□□□ 0.5
SDF4-206ENST00000478938 LYZL4Q96KX0 146 aa18.19■□□□□ 0.5
SDF4-206ENST00000478938 HDAC8Q9BY41 377 aa18.19■□□□□ 0.5
SDF4-206ENST00000478938 UBE2ZQ9H832 354 aaPredicted RBP18.19■□□□□ 0.5
SDF4-206ENST00000478938 NRN1Q9NPD7 142 aa18.19■□□□□ 0.5
SDF4-206ENST00000478938 IGHV1-69-2A0A0G2JMI3 117 aa18.18■□□□□ 0.5
SDF4-206ENST00000478938 A0A0G2JRQ6 117 aa18.18■□□□□ 0.5
SDF4-206ENST00000478938 PAGE4O60829 102 aa18.18■□□□□ 0.5
SDF4-206ENST00000478938 CCL1P22362 96 aa18.18■□□□□ 0.5
SDF4-206ENST00000478938 FOXL1Q12952 345 aa18.18■□□□□ 0.5
SDF4-206ENST00000478938 SNAI3Q3KNW1 292 aa18.18■□□□□ 0.5
SDF4-206ENST00000478938 RD3Q7Z3Z2 195 aa18.18■□□□□ 0.5
SDF4-206ENST00000478938 WFDC8Q8IUA0 241 aa18.18■□□□□ 0.5
SDF4-206ENST00000478938 ZNF114Q8NC26 417 aa18.18■□□□□ 0.5
SDF4-206ENST00000478938 OR10V1Q8NGI7 309 aa18.18■□□□□ 0.5
SDF4-206ENST00000478938 PRTFDC1Q9NRG1 225 aa18.18■□□□□ 0.5
SDF4-206ENST00000478938 SPRY1O43609 319 aaPredicted RBP18.18■□□□□ 0.5
SDF4-206ENST00000478938 IAPPP10997 89 aa18.18■□□□□ 0.5
SDF4-206ENST00000478938 RPS18P62269 152 aaKnown RBP18.18■□□□□ 0.5
SDF4-206ENST00000478938 RHOGP84095 191 aa18.18■□□□□ 0.5
SDF4-206ENST00000478938 SERF2P84101 59 aa18.18■□□□□ 0.5
SDF4-206ENST00000478938 HYAL1Q12794 435 aa18.18■□□□□ 0.5
SDF4-206ENST00000478938 NOGQ13253 232 aa18.18■□□□□ 0.5
SDF4-206ENST00000478938 ACSF3Q4G176 576 aaPredicted RBP18.18■□□□□ 0.5
SDF4-206ENST00000478938 HAPLN4Q86UW8 402 aa18.18■□□□□ 0.5
SDF4-206ENST00000478938 NEIL1Q96FI4 390 aaPredicted RBP18.18■□□□□ 0.5
SDF4-206ENST00000478938 IGLC7A0M8Q6 106 aa18.17■□□□□ 0.5
SDF4-206ENST00000478938 PSG4Q00888 419 aa18.17■□□□□ 0.5
SDF4-206ENST00000478938 LRRC75BQ2VPJ9 315 aa18.17■□□□□ 0.5
SDF4-206ENST00000478938 OR4A47Q6IF82 309 aa18.17■□□□□ 0.5
SDF4-206ENST00000478938 PRR27Q6MZM9 219 aa18.17■□□□□ 0.5
SDF4-206ENST00000478938 SYT13Q7L8C5 426 aa18.17■□□□□ 0.5
SDF4-206ENST00000478938 S100A7AQ86SG5 101 aa18.17■□□□□ 0.5
SDF4-206ENST00000478938 IGHV2-26A0A0B4J1V2 119 aa18.17■□□□□ 0.5
SDF4-206ENST00000478938 B4DGG1 531 aa18.17■□□□□ 0.5
SDF4-206ENST00000478938 NBEAP1P0C6P0 100 aa18.17■□□□□ 0.5
SDF4-206ENST00000478938 PMCHP20382 165 aa18.17■□□□□ 0.5
SDF4-206ENST00000478938 VDAC1P21796 283 aa18.17■□□□□ 0.5
SDF4-206ENST00000478938 PDCD1Q15116 288 aa18.17■□□□□ 0.5
SDF4-206ENST00000478938 SMIM12Q96EX1 92 aa18.17■□□□□ 0.5
SDF4-206ENST00000478938 DERL1Q9BUN8 251 aa18.17■□□□□ 0.5
SDF4-206ENST00000478938 MEGF9Q9H1U4 602 aa18.17■□□□□ 0.5
SDF4-206ENST00000478938 DAP3P51398 398 aaKnown RBP18.16■□□□□ 0.5
SDF4-206ENST00000478938 PPP1CAP62136 330 aa18.16■□□□□ 0.5
SDF4-206ENST00000478938 MRPL49Q13405 166 aaKnown RBP18.16■□□□□ 0.5
SDF4-206ENST00000478938 SLC39A11Q8N1S5 342 aa18.16■□□□□ 0.5
SDF4-206ENST00000478938 OR56B2PQ8NGI1 322 aa18.16■□□□□ 0.5
SDF4-206ENST00000478938 ABHD3Q8WU67 409 aa18.16■□□□□ 0.5
SDF4-206ENST00000478938 FGF14Q92915 247 aa18.16■□□□□ 0.5
SDF4-206ENST00000478938 PTRH2Q9Y3E5 179 aaKnown RBP18.16■□□□□ 0.5
SDF4-206ENST00000478938 RNF212BA8MTL3 300 aa18.16■□□□□ 0.5
SDF4-206ENST00000478938 NPIPA2E9PIF3 369 aa18.16■□□□□ 0.5
SDF4-206ENST00000478938 CRYAAP02489 173 aa18.16■□□□□ 0.5
SDF4-206ENST00000478938 FRMD6-AS1P0C7T7 363 aa18.16■□□□□ 0.5
SDF4-206ENST00000478938 AMTP48728 403 aa18.16■□□□□ 0.5
SDF4-206ENST00000478938 EIF3IQ13347 325 aaKnown RBP18.16■□□□□ 0.5
SDF4-206ENST00000478938 PLPPR5Q32ZL2 321 aa18.16■□□□□ 0.5
SDF4-206ENST00000478938 ZNF818PQ6ZRF7 136 aa18.16■□□□□ 0.5
SDF4-206ENST00000478938 BAHD1Q8TBE0 780 aaPredicted RBP18.16■□□□□ 0.5
SDF4-206ENST00000478938 PINX1Q96BK5 328 aaKnown RBP18.16■□□□□ 0.5
SDF4-206ENST00000478938 LRRC3BQ96PB8 259 aa18.16■□□□□ 0.5
SDF4-206ENST00000478938 LRFN3Q9BTN0 628 aa18.16■□□□□ 0.5
SDF4-206ENST00000478938 RBFOX2O43251 390 aaKnown RBP eCLIP18.15■□□□□ 0.51e-6■■■□□ 16.1
SDF4-206ENST00000478938 ZNF253O75346 499 aa18.15■□□□□ 0.5
SDF4-206ENST00000478938 IL12BP29460 328 aa18.15■□□□□ 0.5
SDF4-206ENST00000478938 MFAP5Q13361 173 aa18.15■□□□□ 0.5
SDF4-206ENST00000478938 Q5PR19 223 aa18.15■□□□□ 0.5
SDF4-206ENST00000478938 KLHDC1Q8N7A1 406 aa18.15■□□□□ 0.5
SDF4-206ENST00000478938 TCTEX1D1Q8N7M0 179 aa18.15■□□□□ 0.5
SDF4-206ENST00000478938 ZIC4Q8N9L1 334 aa18.15■□□□□ 0.5
SDF4-206ENST00000478938 ST6GALNAC3Q8NDV1 305 aa18.15■□□□□ 0.5
SDF4-206ENST00000478938 TNFRSF14Q92956 283 aa18.15■□□□□ 0.5
SDF4-206ENST00000478938 SLC7A10Q9NS82 523 aa18.15■□□□□ 0.5
SDF4-206ENST00000478938 TMEM131Q92545 1883 aa18.15■□□□□ 0.5
SDF4-206ENST00000478938 UBE2L5PA0A1B0GUS4 154 aa18.15■□□□□ 0.5
SDF4-206ENST00000478938 ZNF891A8MT65 544 aaPredicted RBP18.15■□□□□ 0.5
SDF4-206ENST00000478938 FAM166BA8MTA8 275 aa18.15■□□□□ 0.5
SDF4-206ENST00000478938 NRASP01111 189 aa18.15■□□□□ 0.5
SDF4-206ENST00000478938 KRASP01116 189 aa18.15■□□□□ 0.5
SDF4-206ENST00000478938 PIGYQ3MUY2 71 aa18.15■□□□□ 0.5
SDF4-206ENST00000478938 GAPTQ8N292 157 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms