RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 OR1P1Q8NH06 330 aa2.79□□□□□ -1.96
UPF3B-203ENST00000478840 OR10D3Q8NH80 312 aa2.79□□□□□ -1.96
UPF3B-203ENST00000478840 APOBEC3DQ96AK3 386 aaPredicted RBP2.79□□□□□ -1.96
UPF3B-203ENST00000478840 UBE2WQ96B02 151 aa2.79□□□□□ -1.96
UPF3B-203ENST00000478840 MROQ9BYG7 248 aa2.79□□□□□ -1.96
UPF3B-203ENST00000478840 TAS2R1Q9NYW7 299 aa2.79□□□□□ -1.96
UPF3B-203ENST00000478840 ZNF230Q9UIE0 474 aaPredicted RBP2.79□□□□□ -1.96
UPF3B-203ENST00000478840 RPUSD1Q9UJJ7 312 aaKnown RBP2.79□□□□□ -1.96
UPF3B-203ENST00000478840 NUP205Q92621 2012 aa2.79□□□□□ -1.96
UPF3B-203ENST00000478840 CHD2O14647 1828 aaKnown RBP2.79□□□□□ -1.96
UPF3B-203ENST00000478840 GPR179Q6PRD1 2367 aa2.79□□□□□ -1.96
UPF3B-203ENST00000478840 NPATQ14207 1427 aa2.78□□□□□ -1.96
UPF3B-203ENST00000478840 F5H5T6 163 aa2.78□□□□□ -1.96
UPF3B-203ENST00000478840 H0Y980 276 aa2.78□□□□□ -1.96
UPF3B-203ENST00000478840 M0QZ92 97 aa2.78□□□□□ -1.96
UPF3B-203ENST00000478840 DENRO43583 198 aaKnown RBP2.78□□□□□ -1.96
UPF3B-203ENST00000478840 HBZP02008 142 aa2.78□□□□□ -1.96
UPF3B-203ENST00000478840 GYPCP04921 128 aa2.78□□□□□ -1.96
UPF3B-203ENST00000478840 FLI1Q01543 452 aaPredicted RBP2.78□□□□□ -1.96
UPF3B-203ENST00000478840 IL15RAQ13261 267 aa2.78□□□□□ -1.96
UPF3B-203ENST00000478840 BCL2A1Q16548 175 aa2.78□□□□□ -1.96
UPF3B-203ENST00000478840 KRTAP13-3Q3SY46 172 aa2.78□□□□□ -1.96
UPF3B-203ENST00000478840 LYZL2Q7Z4W2 148 aa2.78□□□□□ -1.96
UPF3B-203ENST00000478840 DOLPP1Q86YN1 238 aa2.78□□□□□ -1.96
UPF3B-203ENST00000478840 TMEM75Q8N9X5 138 aa2.78□□□□□ -1.96
UPF3B-203ENST00000478840 HAVCR2Q8TDQ0 301 aa2.78□□□□□ -1.96
UPF3B-203ENST00000478840 CYGBQ8WWM9 190 aa2.78□□□□□ -1.96
UPF3B-203ENST00000478840 OR7D2Q96RA2 312 aa2.78□□□□□ -1.96
UPF3B-203ENST00000478840 ZNF443Q9Y2A4 671 aaPredicted RBP2.78□□□□□ -1.96
UPF3B-203ENST00000478840 LINC00588Q9Y4M8 146 aa2.78□□□□□ -1.96
UPF3B-203ENST00000478840 TRBV24-1A0A075B6N3 115 aa2.77□□□□□ -1.97
UPF3B-203ENST00000478840 IGKV1-12A0A0C4DH73 117 aa2.77□□□□□ -1.97
UPF3B-203ENST00000478840 TEX50A0A1B0GTY4 177 aa2.77□□□□□ -1.97
UPF3B-203ENST00000478840 A0A1W2PQ67 120 aa2.77□□□□□ -1.97
UPF3B-203ENST00000478840 B4DEV8 164 aa2.77□□□□□ -1.97
UPF3B-203ENST00000478840 LRRN3E7EW58 273 aa2.77□□□□□ -1.97
UPF3B-203ENST00000478840 C15orf65H3BRN8 121 aa2.77□□□□□ -1.97
UPF3B-203ENST00000478840 CXCR6O00574 342 aa2.77□□□□□ -1.97
UPF3B-203ENST00000478840 COPEO14579 308 aa2.77□□□□□ -1.97
UPF3B-203ENST00000478840 PFDN6O15212 129 aa2.77□□□□□ -1.97
UPF3B-203ENST00000478840 IGKV1D-12P01611 117 aa2.77□□□□□ -1.97
UPF3B-203ENST00000478840 ATP5G1P05496 136 aa2.77□□□□□ -1.97
UPF3B-203ENST00000478840 CRYBA1P05813 215 aa2.77□□□□□ -1.97
UPF3B-203ENST00000478840 GUSBP08236 651 aa2.77□□□□□ -1.97
UPF3B-203ENST00000478840 CTLA4P16410 223 aa2.77□□□□□ -1.97
UPF3B-203ENST00000478840 SULT1A2P50226 295 aa2.77□□□□□ -1.97
UPF3B-203ENST00000478840 FOXA1P55317 472 aa2.77□□□□□ -1.97
UPF3B-203ENST00000478840 KLF3P57682 345 aaPredicted RBP2.77□□□□□ -1.97
UPF3B-203ENST00000478840 GABARAPL2P60520 117 aa2.77□□□□□ -1.97
UPF3B-203ENST00000478840 MESTQ5EB52 335 aa2.77□□□□□ -1.97
UPF3B-203ENST00000478840 OGFRL1Q5TC84 451 aaPredicted RBP2.77□□□□□ -1.97
UPF3B-203ENST00000478840 PAGE2Q7Z2X7 111 aa2.77□□□□□ -1.97
UPF3B-203ENST00000478840 NATD1Q8N6N6 113 aa2.77□□□□□ -1.97
UPF3B-203ENST00000478840 OR8J2Q8NGG1 315 aa2.77□□□□□ -1.97
UPF3B-203ENST00000478840 PIGXQ8TBF5 258 aa2.77□□□□□ -1.97
UPF3B-203ENST00000478840 TLCD1Q96CP7 247 aa2.77□□□□□ -1.97
UPF3B-203ENST00000478840 ACY3Q96HD9 319 aa2.77□□□□□ -1.97
UPF3B-203ENST00000478840 RTBDNQ9BSG5 229 aaPredicted RBP2.77□□□□□ -1.97
UPF3B-203ENST00000478840 FGFR1OP2Q9NVK5 253 aa2.77□□□□□ -1.97
UPF3B-203ENST00000478840 PHLDA3Q9Y5J5 127 aa2.77□□□□□ -1.97
UPF3B-203ENST00000478840 SSH2Q76I76 1423 aa2.76□□□□□ -1.97
UPF3B-203ENST00000478840 A0A0B4J2C4 111 aa2.76□□□□□ -1.97
UPF3B-203ENST00000478840 VGLL3A8MV65 326 aa2.76□□□□□ -1.97
UPF3B-203ENST00000478840 TYMSP04818 313 aa2.76□□□□□ -1.97
UPF3B-203ENST00000478840 BLVRAP53004 296 aa2.76□□□□□ -1.97
UPF3B-203ENST00000478840 MYL6P60660 151 aa2.76□□□□□ -1.97
UPF3B-203ENST00000478840 DHRS2Q13268 280 aa2.76□□□□□ -1.97
UPF3B-203ENST00000478840 RGS21Q2M5E4 152 aa2.76□□□□□ -1.97
UPF3B-203ENST00000478840 C10orf91Q5T1B1 145 aa2.76□□□□□ -1.97
UPF3B-203ENST00000478840 CST9Q5W186 159 aa2.76□□□□□ -1.97
UPF3B-203ENST00000478840 ZNF660Q6AZW8 331 aaPredicted RBP2.76□□□□□ -1.97
UPF3B-203ENST00000478840 LCN8Q6JVE9 175 aa2.76□□□□□ -1.97
UPF3B-203ENST00000478840 LRRN1Q6UXK5 716 aa2.76□□□□□ -1.97
UPF3B-203ENST00000478840 OR11G2Q8NGC1 345 aa2.76□□□□□ -1.97
UPF3B-203ENST00000478840 C8orf76Q96K31 380 aa2.76□□□□□ -1.97
UPF3B-203ENST00000478840 PARD6GQ9BYG4 376 aaPredicted RBP2.76□□□□□ -1.97
UPF3B-203ENST00000478840 BCL2L14Q9BZR8 327 aa2.76□□□□□ -1.97
UPF3B-203ENST00000478840 OR51B6Q9H340 312 aa2.76□□□□□ -1.97
UPF3B-203ENST00000478840 UCK1Q9HA47 277 aa2.76□□□□□ -1.97
UPF3B-203ENST00000478840 BABAM2Q9NXR7 383 aa2.76□□□□□ -1.97
UPF3B-203ENST00000478840 OR5V1Q9UGF6 321 aa2.76□□□□□ -1.97
UPF3B-203ENST00000478840 POLR3HQ9Y535 204 aaPredicted RBP2.76□□□□□ -1.97
UPF3B-203ENST00000478840 R4GN34 69 aa2.76□□□□□ -1.97
UPF3B-203ENST00000478840 C9orf84Q5VXU9 1444 aa2.76□□□□□ -1.97
UPF3B-203ENST00000478840 COL1A2P08123 1366 aa2.75□□□□□ -1.97
UPF3B-203ENST00000478840 CEP170Q5SW79 1584 aa2.75□□□□□ -1.97
UPF3B-203ENST00000478840 C21orf140B9A014 251 aa2.75□□□□□ -1.97
UPF3B-203ENST00000478840 C4orf51C9J302 202 aa2.75□□□□□ -1.97
UPF3B-203ENST00000478840 SH2D1AO60880 128 aa2.75□□□□□ -1.97
UPF3B-203ENST00000478840 IGLV3-19P01714 112 aa2.75□□□□□ -1.97
UPF3B-203ENST00000478840 HLA-DRAP01903 254 aa2.75□□□□□ -1.97
UPF3B-203ENST00000478840 CXCR4P61073 352 aa2.75□□□□□ -1.97
UPF3B-203ENST00000478840 EBPQ15125 230 aaKnown RBP2.75□□□□□ -1.97
UPF3B-203ENST00000478840 PYCR3Q53H96 274 aa2.75□□□□□ -1.97
UPF3B-203ENST00000478840 TNFAIP8L2Q6P589 184 aaPredicted RBP2.75□□□□□ -1.97
UPF3B-203ENST00000478840 LRP11Q86VZ4 500 aa2.75□□□□□ -1.97
UPF3B-203ENST00000478840 C10orf67Q8IYJ2 551 aa2.75□□□□□ -1.97
UPF3B-203ENST00000478840 PTH2Q96A98 100 aa2.75□□□□□ -1.97
UPF3B-203ENST00000478840 EBNA1BP2Q99848 306 aaKnown RBP2.75□□□□□ -1.97
UPF3B-203ENST00000478840 TIPINQ9BVW5 301 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 576 ms