RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 SSBP2P81877 361 aaPredicted RBP10.91□□□□□ -0.66
RTFDC1-207ENST00000477573 SMAGPQ0VAQ4 97 aa10.91□□□□□ -0.66
RTFDC1-207ENST00000477573 ADIRFQ15847 76 aa10.91□□□□□ -0.66
RTFDC1-207ENST00000477573 PMCHL1Q16048 86 aa10.91□□□□□ -0.66
RTFDC1-207ENST00000477573 HLA-BQ31612 363 aa10.91□□□□□ -0.66
RTFDC1-207ENST00000477573 OR8I2Q8N0Y5 310 aa10.91□□□□□ -0.66
RTFDC1-207ENST00000477573 SAP25Q8TEE9 199 aa10.91□□□□□ -0.66
RTFDC1-207ENST00000477573 ZNF501Q96CX3 271 aaPredicted RBP10.91□□□□□ -0.66
RTFDC1-207ENST00000477573 NUDT22Q9BRQ3 303 aa10.91□□□□□ -0.66
RTFDC1-207ENST00000477573 RTBDNQ9BSG5 229 aaPredicted RBP10.91□□□□□ -0.66
RTFDC1-207ENST00000477573 PSMG3Q9BT73 122 aaPredicted RBP10.91□□□□□ -0.66
RTFDC1-207ENST00000477573 PATZ1Q9HBE1 687 aaKnown RBP10.91□□□□□ -0.66
RTFDC1-207ENST00000477573 NSG1A0A0A6YYJ2 146 aa10.9□□□□□ -0.66
RTFDC1-207ENST00000477573 SIRPB1O00241 398 aa10.9□□□□□ -0.66
RTFDC1-207ENST00000477573 CD5LO43866 347 aa10.9□□□□□ -0.66
RTFDC1-207ENST00000477573 ZNF253O75346 499 aa10.9□□□□□ -0.66
RTFDC1-207ENST00000477573 UPK3AO75631 287 aa10.9□□□□□ -0.66
RTFDC1-207ENST00000477573 SLC6A6P31641 620 aa10.9□□□□□ -0.66
RTFDC1-207ENST00000477573 RBMXP38159 391 aaKnown RBP10.9□□□□□ -0.66
RTFDC1-207ENST00000477573 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.9□□□□□ -0.66
RTFDC1-207ENST00000477573 PLAC9Q5JTB6 97 aa10.9□□□□□ -0.66
RTFDC1-207ENST00000477573 UFSP1Q6NVU6 142 aa10.9□□□□□ -0.66
RTFDC1-207ENST00000477573 ZAR1Q86SH2 424 aa10.9□□□□□ -0.66
RTFDC1-207ENST00000477573 SIGLECL1Q8N7X8 197 aa10.9□□□□□ -0.66
RTFDC1-207ENST00000477573 NECAP1Q8NC96 275 aa10.9□□□□□ -0.66
RTFDC1-207ENST00000477573 OR4N2Q8NGD1 307 aa10.9□□□□□ -0.66
RTFDC1-207ENST00000477573 OR4K13Q8NH42 304 aa10.9□□□□□ -0.66
RTFDC1-207ENST00000477573 NAT6Q93015 286 aa10.9□□□□□ -0.66
RTFDC1-207ENST00000477573 ADOQ96SZ5 270 aa10.9□□□□□ -0.66
RTFDC1-207ENST00000477573 SAMD10Q9BYL1 202 aa10.9□□□□□ -0.66
RTFDC1-207ENST00000477573 KCNK15Q9H427 330 aa10.9□□□□□ -0.66
RTFDC1-207ENST00000477573 EHFQ9NZC4 300 aa10.9□□□□□ -0.66
RTFDC1-207ENST00000477573 COPS7AQ9UBW8 275 aa10.9□□□□□ -0.66
RTFDC1-207ENST00000477573 ATXN7O15265 892 aaPredicted RBP10.9□□□□□ -0.66
RTFDC1-207ENST00000477573 ABHD16AO95870 558 aa10.9□□□□□ -0.66
RTFDC1-207ENST00000477573 IGKV1D-16P01601 117 aa10.9□□□□□ -0.66
RTFDC1-207ENST00000477573 CFIP05156 583 aa10.9□□□□□ -0.66
RTFDC1-207ENST00000477573 AADACP22760 399 aa10.9□□□□□ -0.66
RTFDC1-207ENST00000477573 C1orf210Q8IVY1 113 aa10.9□□□□□ -0.66
RTFDC1-207ENST00000477573 BCORP1Q8N888 145 aa10.9□□□□□ -0.66
RTFDC1-207ENST00000477573 DAZLQ92904 295 aaKnown RBP10.9□□□□□ -0.66
RTFDC1-207ENST00000477573 PRSS27Q9BQR3 290 aa10.9□□□□□ -0.66
RTFDC1-207ENST00000477573 REPIN1Q9BWE0 567 aaKnown RBP10.9□□□□□ -0.66
RTFDC1-207ENST00000477573 FBXL7Q9UJT9 491 aa10.9□□□□□ -0.66
RTFDC1-207ENST00000477573 VDAC3Q9Y277 283 aa10.9□□□□□ -0.66
RTFDC1-207ENST00000477573 MED31Q9Y3C7 131 aa10.9□□□□□ -0.66
RTFDC1-207ENST00000477573 USP34Q70CQ2 3546 aa10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 TNRC6BQ9UPQ9 1833 aaKnown RBP10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 IGKV3D-11A0A0A0MRZ8 115 aa10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 TRBV7-9A0A0J9YWB2 115 aa10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 DUXBA0A1W2PPF3 345 aa10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 ALG1L2C9J202 215 aa10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 ATXN8OSP0DMR3 200 aa10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 GRK6P43250 576 aa10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 YPEL3P61236 119 aaPredicted RBP10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 MFGE8Q08431 387 aaPredicted RBP10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 ALG10Q5BKT4 473 aa10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 PHYHD1Q5SRE7 291 aa10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 GUSBP11Q6P575 273 aa10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 RTN4RL2Q86UN3 420 aa10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 EMG1Q92979 244 aaKnown RBP10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 GEMIN7Q9H840 131 aaKnown RBP10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 SRA1Q9HD15 236 aaKnown RBP10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 DNAJB12Q9NXW2 375 aaKnown RBP10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 ANAPC10Q9UM13 185 aa10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 RCL1Q9Y2P8 373 aaKnown RBP10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 GAGE10A6NGK3 116 aa10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 NPIPA5E9PKD4 350 aa10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 NPIPA3F8WFD2 350 aa10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 K7EQM0 130 aa10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 IL3RAP26951 378 aa10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 THBS3P49746 956 aa10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 HERV-K104P63124 156 aa10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 PMP22Q01453 160 aa10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 Q0VG73 95 aa10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 FFAR4Q5NUL3 377 aa10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 C12orf54Q6X4T0 127 aa10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 LINC00346Q8IVM7 164 aa10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 GVQW1Q8N7I0 195 aa10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 ZNF676Q8N7Q3 588 aa10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 SMIM7Q9BQ49 75 aa10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 GTSF1LQ9H1H1 148 aa10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 CALHM2Q9HA72 323 aa10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 NPIPA1Q9UND3 350 aa10.89□□□□□ -0.67
RTFDC1-207ENST00000477573 A0A0B4J2E0 115 aa10.88□□□□□ -0.67
RTFDC1-207ENST00000477573 A0A1B0GX12 115 aa10.88□□□□□ -0.67
RTFDC1-207ENST00000477573 HS3ST1O14792 307 aa10.88□□□□□ -0.67
RTFDC1-207ENST00000477573 MPPED1O15442 326 aa10.88□□□□□ -0.67
RTFDC1-207ENST00000477573 PITX3O75364 302 aa10.88□□□□□ -0.67
RTFDC1-207ENST00000477573 SERF1AO75920 110 aa10.88□□□□□ -0.67
RTFDC1-207ENST00000477573 KBTBD11O94819 623 aa10.88□□□□□ -0.67
RTFDC1-207ENST00000477573 DBHP09172 617 aa10.88□□□□□ -0.67
RTFDC1-207ENST00000477573 UCP1P25874 307 aa10.88□□□□□ -0.67
RTFDC1-207ENST00000477573 PPOXP50336 477 aa10.88□□□□□ -0.67
RTFDC1-207ENST00000477573 LINC00310P59036 64 aa10.88□□□□□ -0.67
RTFDC1-207ENST00000477573 KRTDAPP60985 99 aa10.88□□□□□ -0.67
RTFDC1-207ENST00000477573 CCL7P80098 99 aa10.88□□□□□ -0.67
RTFDC1-207ENST00000477573 NNATQ16517 81 aa10.88□□□□□ -0.67
RTFDC1-207ENST00000477573 PEAR1Q5VY43 1037 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms