RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 SELENOIQ9C0D9 397 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 LPAR5Q9H1C0 372 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 TMEM133Q9H2Q1 129 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 BANF2Q9H503 90 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 AUNIPQ9H7T9 357 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 TAS2R8Q9NYW2 309 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 UBE2J1Q9Y385 318 aaPredicted RBP6.7□□□□□ -1.34
HDAC6-221ENST00000477561 RNF114Q9Y508 228 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 HILPDAQ9Y5L2 63 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 MMP24Q9Y5R2 645 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 SESN1Q9Y6P5 492 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 NBEAL1Q6ZS30 2694 aa6.7□□□□□ -1.34
HDAC6-221ENST00000477561 IGHV2-26A0A0B4J1V2 119 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 TRAV39A0A0B4J263 110 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 A0A1B0GUS0 222 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 ODAMA1E959 279 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 FAM90A10PA6NDY2 464 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 FAM90A18PA6NE21 464 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 FAM90A16PA6NEW6 464 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 FAM90A20PA6NIJ5 464 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 FAM90A8PA6NJQ4 464 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 FAM90A7PA6NKC0 464 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 FAM90A22PA8MWA6 464 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 FAM90A12PA8MX19 464 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 FAM90A5PA8MXJ8 464 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 FAM90A23PA8MXZ1 464 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 RBBP9O75884 186 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 RBP4P02753 201 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 LPLP06858 475 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 CD3GP09693 182 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 FAM90A15PP0C7V4 464 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 FAM90A13PP0C7W8 464 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 FAM90A14PP0C7W9 464 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 FAM90A24PP0C7X0 464 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 HIST1H1DP16402 221 aaKnown RBP6.69□□□□□ -1.34
HDAC6-221ENST00000477561 ACTBP60709 375 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 RPL15P61313 204 aaKnown RBP6.69□□□□□ -1.34
HDAC6-221ENST00000477561 DGCR2P98153 550 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 PNLIPRP3Q17RR3 467 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 ZNF260Q3ZCT1 412 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 UTF1Q5T230 341 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 Q6ZTK2 550 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 LINC00596Q86U02 117 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 ABHD12Q8N2K0 398 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 TOMM5Q8N4H5 51 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 Q8NFD4 153 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 PLPPR1Q8TBJ4 325 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 CHPT1Q8WUD6 406 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 WFDC12Q8WWY7 111 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 CORO2AQ92828 525 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 TRIM63Q969Q1 353 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 RAB3CQ96E17 227 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 MALSU1Q96EH3 234 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 Q96M66 194 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 CLEC7AQ9BXN2 247 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 GAL3ST2Q9H3Q3 398 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 KIF25Q9UIL4 384 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 ST3GAL6Q9Y274 331 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 SIGLEC9Q9Y336 463 aa6.69□□□□□ -1.34
HDAC6-221ENST00000477561 TBL2Q9Y4P3 447 aaKnown RBP6.69□□□□□ -1.34
HDAC6-221ENST00000477561 MEIKINA0A087WXM9 373 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 NAP1L6A6NFF2 107 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 SERPINE3A8MV23 424 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 GEMIN2O14893 280 aaKnown RBP6.68□□□□□ -1.34
HDAC6-221ENST00000477561 CHST1O43916 411 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 CA11O75493 328 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 OR7C1O76099 320 aaPredicted RBP6.68□□□□□ -1.34
HDAC6-221ENST00000477561 IGHV3-7P01780 117 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 CSF1P09603 554 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 NFYBP25208 207 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 BLVRBP30043 206 aaPredicted RBP6.68□□□□□ -1.34
HDAC6-221ENST00000477561 FAUP35544 74 aaKnown RBP6.68□□□□□ -1.34
HDAC6-221ENST00000477561 GLP1RP43220 463 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 CBX5P45973 191 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 GNG2P59768 71 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 MRPS15P82914 257 aaKnown RBP6.68□□□□□ -1.34
HDAC6-221ENST00000477561 DYRK1AQ13627 763 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 IL13RA2Q14627 380 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 OXA1LQ15070 435 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 LTC4SQ16873 150 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 C17orf58Q2M2W7 97 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 MPV17LQ2QL34 196 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 MOGAT2Q3SYC2 334 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 CDNFQ49AH0 187 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 RNASE12Q5GAN4 147 aaKnown RBP6.68□□□□□ -1.34
HDAC6-221ENST00000477561 NHLRC3Q5JS37 347 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 ATAD3CQ5T2N8 411 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 HIST2H2BDQ6DRA6 164 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 CCBE1Q6UXH8 406 aaPredicted RBP6.68□□□□□ -1.34
HDAC6-221ENST00000477561 HEPN1Q6WQI6 88 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 TMEM219Q86XT9 240 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 CENPSQ8N2Z9 138 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 SUMF2Q8NBJ7 301 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 OR13A1Q8NGR1 328 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 OR52I2Q8NH67 350 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 RFESDQ8TAC1 157 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 ENKURQ8TC29 256 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 MRGPRDQ8TDS7 321 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 GPX8Q8TED1 209 aa6.68□□□□□ -1.34
HDAC6-221ENST00000477561 NEDD4LQ96PU5 975 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms