RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 FOXB2Q5VYV0 432 aa12.44□□□□□ -0.42
CLDN11-204ENST00000477531 STEAP3Q658P3 488 aa12.44□□□□□ -0.42
CLDN11-204ENST00000477531 UNQ9370/PRO34162Q6UXP9 181 aa12.44□□□□□ -0.42
CLDN11-204ENST00000477531 ZNF554Q86TJ5 538 aa12.44□□□□□ -0.42
CLDN11-204ENST00000477531 LYPD6Q86Y78 171 aa12.44□□□□□ -0.42
CLDN11-204ENST00000477531 GAPTQ8N292 157 aa12.44□□□□□ -0.42
CLDN11-204ENST00000477531 OR8H1Q8NGG4 311 aa12.44□□□□□ -0.42
CLDN11-204ENST00000477531 PHYHIPQ92561 330 aa12.44□□□□□ -0.42
CLDN11-204ENST00000477531 ST6GALNAC6Q969X2 333 aa12.44□□□□□ -0.42
CLDN11-204ENST00000477531 GPR61Q9BZJ8 451 aa12.44□□□□□ -0.42
CLDN11-204ENST00000477531 LIN7CQ9NUP9 197 aaKnown RBP12.44□□□□□ -0.42
CLDN11-204ENST00000477531 NKX1-2Q9UD57 310 aaPredicted RBP12.44□□□□□ -0.42
CLDN11-204ENST00000477531 TPRKBQ9Y3C4 175 aa12.44□□□□□ -0.42
CLDN11-204ENST00000477531 LRRC42Q9Y546 428 aa12.44□□□□□ -0.42
CLDN11-204ENST00000477531 AP4M1O00189 453 aa12.43□□□□□ -0.42
CLDN11-204ENST00000477531 SLC31A2O15432 143 aa12.43□□□□□ -0.42
CLDN11-204ENST00000477531 RGS11O94810 467 aa12.43□□□□□ -0.42
CLDN11-204ENST00000477531 SLC6A1P30531 599 aa12.43□□□□□ -0.42
CLDN11-204ENST00000477531 ZNF137PP52743 207 aa12.43□□□□□ -0.42
CLDN11-204ENST00000477531 RPL23AP62750 156 aaKnown RBP12.43□□□□□ -0.42
CLDN11-204ENST00000477531 HSD17B12Q53GQ0 312 aa12.43□□□□□ -0.42
CLDN11-204ENST00000477531 CT45A1Q5HYN5 189 aa12.43□□□□□ -0.42
CLDN11-204ENST00000477531 FAM53AQ6NSI3 398 aaPredicted RBP12.43□□□□□ -0.42
CLDN11-204ENST00000477531 Q6ZPA2 131 aa12.43□□□□□ -0.42
CLDN11-204ENST00000477531 CEACAM19Q7Z692 300 aa12.43□□□□□ -0.42
CLDN11-204ENST00000477531 STPG2Q8N412 459 aa12.43□□□□□ -0.42
CLDN11-204ENST00000477531 CT45A3Q8NHU0 189 aa12.43□□□□□ -0.42
CLDN11-204ENST00000477531 UFD1Q92890 307 aa12.43□□□□□ -0.42
CLDN11-204ENST00000477531 TMEM59Q9BXS4 323 aa12.43□□□□□ -0.42
CLDN11-204ENST00000477531 ABCG5Q9H222 651 aa12.43□□□□□ -0.42
CLDN11-204ENST00000477531 LINC00527Q9UJ94 153 aa12.43□□□□□ -0.42
CLDN11-204ENST00000477531 SRMP19623 302 aa12.42□□□□□ -0.42
CLDN11-204ENST00000477531 INSL4Q14641 139 aa12.42□□□□□ -0.42
CLDN11-204ENST00000477531 SIGIRRQ6IA17 410 aa12.42□□□□□ -0.42
CLDN11-204ENST00000477531 TEX38Q6PEX7 206 aa12.42□□□□□ -0.42
CLDN11-204ENST00000477531 Q8N6K4 173 aa12.42□□□□□ -0.42
CLDN11-204ENST00000477531 ZNF439Q8NDP4 499 aa12.42□□□□□ -0.42
CLDN11-204ENST00000477531 KCNG3Q8TAE7 436 aa12.42□□□□□ -0.42
CLDN11-204ENST00000477531 DPF1Q92782 380 aa12.42□□□□□ -0.42
CLDN11-204ENST00000477531 S1PR3Q99500 378 aa12.42□□□□□ -0.42
CLDN11-204ENST00000477531 MBNL3Q9NUK0 354 aaKnown RBP12.42□□□□□ -0.42
CLDN11-204ENST00000477531 AURKAIP1Q9NWT8 199 aaPredicted RBP12.42□□□□□ -0.42
CLDN11-204ENST00000477531 ABRACLQ9P1F3 81 aa12.42□□□□□ -0.42
CLDN11-204ENST00000477531 JPT1Q9UK76 154 aa12.42□□□□□ -0.42
CLDN11-204ENST00000477531 LANCL1O43813 399 aa12.41□□□□□ -0.42
CLDN11-204ENST00000477531 HTR2CP28335 458 aa12.41□□□□□ -0.42
CLDN11-204ENST00000477531 GPR12P47775 334 aa12.41□□□□□ -0.42
CLDN11-204ENST00000477531 ZNF134P52741 427 aa12.41□□□□□ -0.42
CLDN11-204ENST00000477531 HTD2P86397 168 aa12.41□□□□□ -0.42
CLDN11-204ENST00000477531 PNLIPRP3Q17RR3 467 aa12.41□□□□□ -0.42
CLDN11-204ENST00000477531 MORN2Q502X0 79 aa12.41□□□□□ -0.42
CLDN11-204ENST00000477531 C1orf100Q5SVJ3 147 aa12.41□□□□□ -0.42
CLDN11-204ENST00000477531 FAM27D1Q5T7N8 215 aa12.41□□□□□ -0.42
CLDN11-204ENST00000477531 OR2W3Q7Z3T1 314 aa12.41□□□□□ -0.42
CLDN11-204ENST00000477531 Q8N9W7 124 aa12.41□□□□□ -0.42
CLDN11-204ENST00000477531 KLHL30-AS1Q8NEE0 82 aa12.41□□□□□ -0.42
CLDN11-204ENST00000477531 MRPL30Q8TCC3 161 aaKnown RBP12.41□□□□□ -0.42
CLDN11-204ENST00000477531 GALMQ96C23 342 aa12.41□□□□□ -0.42
CLDN11-204ENST00000477531 ABHD14AQ9BUJ0 271 aa12.41□□□□□ -0.42
CLDN11-204ENST00000477531 CHMP1AQ9HD42 196 aaPredicted RBP12.41□□□□□ -0.42
CLDN11-204ENST00000477531 ZNF736B4DX44 427 aaPredicted RBP12.4□□□□□ -0.42
CLDN11-204ENST00000477531 HSMCR30P0CW71 290 aa12.4□□□□□ -0.42
CLDN11-204ENST00000477531 VSIG8P0DPA2 414 aa12.4□□□□□ -0.42
CLDN11-204ENST00000477531 CHATP28329 748 aa12.4□□□□□ -0.42
CLDN11-204ENST00000477531 SOX6P35712 828 aa12.4□□□□□ -0.42
CLDN11-204ENST00000477531 RANBP1P43487 201 aa12.4□□□□□ -0.42
CLDN11-204ENST00000477531 AQP4P55087 323 aa12.4□□□□□ -0.42
CLDN11-204ENST00000477531 RPS27AP62979 156 aaKnown RBP12.4□□□□□ -0.42
CLDN11-204ENST00000477531 TRAM1Q15629 374 aa12.4□□□□□ -0.42
CLDN11-204ENST00000477531 CXorf66Q5JRM2 361 aaPredicted RBP12.4□□□□□ -0.42
CLDN11-204ENST00000477531 LIPKQ5VXJ0 399 aa12.4□□□□□ -0.42
CLDN11-204ENST00000477531 OR10K2Q6IF99 312 aa12.4□□□□□ -0.42
CLDN11-204ENST00000477531 LRRTM1Q86UE6 522 aa12.4□□□□□ -0.42
CLDN11-204ENST00000477531 OR52L2PQ8NGH6 319 aa12.4□□□□□ -0.42
CLDN11-204ENST00000477531 FAAP24Q9BTP7 215 aa12.4□□□□□ -0.42
CLDN11-204ENST00000477531 MCRIP2Q9BUT9 160 aaKnown RBP12.4□□□□□ -0.42
CLDN11-204ENST00000477531 CCDC90BQ9GZT6 254 aa12.4□□□□□ -0.42
CLDN11-204ENST00000477531 LSM2Q9Y333 95 aaKnown RBP12.4□□□□□ -0.42
CLDN11-204ENST00000477531 RGS10O43665 173 aa12.39□□□□□ -0.43
CLDN11-204ENST00000477531 YPEL1O60688 119 aa12.39□□□□□ -0.43
CLDN11-204ENST00000477531 BPNT1O95861 308 aa12.39□□□□□ -0.43
CLDN11-204ENST00000477531 UCHL1P09936 223 aa12.39□□□□□ -0.43
CLDN11-204ENST00000477531 BLVRBP30043 206 aaPredicted RBP12.39□□□□□ -0.43
CLDN11-204ENST00000477531 PPP1CCP36873 323 aaKnown RBP12.39□□□□□ -0.43
CLDN11-204ENST00000477531 MYCNOSP40205 109 aa12.39□□□□□ -0.43
CLDN11-204ENST00000477531 THBS3P49746 956 aa12.39□□□□□ -0.43
CLDN11-204ENST00000477531 C8orf86Q6ZUL3 223 aa12.39□□□□□ -0.43
CLDN11-204ENST00000477531 C6orf201Q7Z4U5 140 aa12.39□□□□□ -0.43
CLDN11-204ENST00000477531 ZNF695Q8IW36 515 aa12.39□□□□□ -0.43
CLDN11-204ENST00000477531 MRPL41Q8IXM3 137 aaKnown RBP12.39□□□□□ -0.43
CLDN11-204ENST00000477531 LINC00482Q8N8I6 264 aa12.39□□□□□ -0.43
CLDN11-204ENST00000477531 OR2AK2Q8NG84 335 aa12.39□□□□□ -0.43
CLDN11-204ENST00000477531 OR6M1Q8NGM8 313 aa12.39□□□□□ -0.43
CLDN11-204ENST00000477531 SETD6Q8TBK2 473 aa12.39□□□□□ -0.43
CLDN11-204ENST00000477531 TMEM203Q969S6 136 aa12.39□□□□□ -0.43
CLDN11-204ENST00000477531 YPEL2Q96QA6 119 aa12.39□□□□□ -0.43
CLDN11-204ENST00000477531 SULT4A1Q9BR01 284 aa12.39□□□□□ -0.43
CLDN11-204ENST00000477531 URM1Q9BTM9 101 aaKnown RBP12.39□□□□□ -0.43
CLDN11-204ENST00000477531 PLGRKTQ9HBL7 147 aa12.39□□□□□ -0.43
CLDN11-204ENST00000477531 PLSCR3Q9NRY6 295 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms