RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	TUBG2	Q9NRH3	451 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	C20orf141	Q9NUB4	165 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	EHF	Q9NZC4	300 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	C1RL	Q9NZP8	487 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	COPS7A	Q9UBW8	275 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	HS3ST2	Q9Y278	367 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	PAM16	Q9Y3D7	125 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	RHBDD3	Q9Y3P4	386 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	TIMM9	Q9Y5J7	89 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	GON4L	Q3T8J9	2241 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	CACNA1I	Q9P0X4	2223 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	TECTA	O75443	2155 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	EYS	Q5T1H1	3165 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	TRAV27	A0A087WT01	109 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	TRAV9-2	A0A087WT02	112 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	EDDM13	A0A1B0GTR0	161 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	LIPT2	A6NK58	231 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	AQP7P3	A6NL99	342 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	ZNF891	A8MT65	544 aa	Predicted RBP	4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	OR11H12	B2RN74	326 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520		M0R1X1	148 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	P2RY10	O00398	339 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	SAP18	O00422	153 aa	Known RBP	4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	DEGS1	O15121	323 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	MPPED1	O15442	326 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	HCRTR1	O43613	425 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	PDE6D	O43924	150 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	TMPRSS11D	O60235	418 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	S1PR2	O95136	353 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	ONECUT2	O95948	504 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	GYPB	P06028	91 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	GPX1	P07203	203 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	CRYGC	P07315	174 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	CYC1	P08574	325 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	H2BFM	P0C1H6	154 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	FUT1	P19526	365 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	KLK2	P20151	261 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	GDF1	P27539	372 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	NTSR1	P30989	418 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	CD70	P32970	193 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	GUCA1A	P43080	201 aa	Predicted RBP	4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	TFPI2	P48307	235 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	RHOB	P62745	196 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	RPL23	P62829	140 aa	Known RBP	4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	SEC11A	P67812	179 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	CCL20	P78556	96 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	QRFP	P83859	136 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	MEF2B	Q02080	365 aa	Predicted RBP	4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	FMOD	Q06828	376 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	FHL1	Q13642	323 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	PRTG	Q2VWP7	1150 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	HLA-B	Q31612	363 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	SLC22A6	Q4U2R8	563 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	PSMG4	Q5JS54	123 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	SPIN3	Q5JUX0	258 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	MRPL2	Q5T653	305 aa	Known RBP	4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	KIAA0895L	Q68EN5	471 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	ZNF880	Q6PDB4	577 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	CBLN3	Q6UW01	205 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	PARS2	Q7L3T8	475 aa	Known RBP	4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	TMEM144	Q7Z5S9	345 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	MEX3D	Q86XN8	651 aa	Known RBP	4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	ZNF709	Q8N972	641 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	OR11H1	Q8NG94	326 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	OR10P1	Q8NGE3	313 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	OR5AN1	Q8NGI8	311 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	OR4P4	Q8NGL7	312 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	OR11H2	Q8NH07	326 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	PLPPR1	Q8TBJ4	325 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	WFDC5	Q8TCV5	224 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	VN1R17P	Q8TDU5	208 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	DOK4	Q8TEW6	326 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	ASB10	Q8WXI3	467 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	OR5P3	Q8WZ94	311 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	NINJ1	Q92982	152 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	IL22RA2	Q969J5	263 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	SPACA9	Q96E40	222 aa	Predicted RBP	4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	SFRP2	Q96HF1	295 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	RASL10B	Q96S79	203 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	NMNAT3	Q96T66	252 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	CITED2	Q99967	270 aa	Predicted RBP	4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	HSPB9	Q9BQS6	159 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	TMEM204	Q9BSN7	226 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	LMF2	Q9BU23	707 aa	Known RBP	4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	SAMD10	Q9BYL1	202 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	SMIM3	Q9BZL3	60 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	PKIB	Q9C010	78 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	NAA60	Q9H7X0	242 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	CALHM2	Q9HA72	323 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	ST20	Q9HBF5	79 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	MBNL1	Q9NR56	388 aa	Known RBP	4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	TMEM38B	Q9NVV0	291 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	FAM206A	Q9NX38	181 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	GNG13	Q9P2W3	67 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	CES1P1	Q9UKY3	287 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	CLEC4E	Q9ULY5	219 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	C19orf53	Q9UNZ5	99 aa	Predicted RBP	4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	PPP1R3C	Q9UQK1	317 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	KLHDC2	Q9Y2U9	406 aa		4.03	□□□□□ -1.76
PTCD3-212	ENST00000477520	MRPS2	Q9Y399	296 aa	Known RBP	4.03	□□□□□ -1.76

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