RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 ORC5O43913 435 aa5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 IGLV1-40P01703 118 aa5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 HLA-DRB1P01911 266 aa5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 HBZP02008 142 aa5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 CD2P06729 351 aa5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 CD40LGP29965 261 aa5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 ZNF93P35789 620 aaPredicted RBP5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 ZNF134P52741 427 aa5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 GBX2P52951 348 aaPredicted RBP5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 GALEQ14376 348 aa5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 ATP6AP1Q15904 470 aa5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 LRRC36Q1X8D7 754 aa5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 SLC22A6Q4U2R8 563 aa5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 CT45A1Q5HYN5 189 aa5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 C6orf183Q5T699 404 aa5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 ZNF497Q6ZNH5 498 aa5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 GTSCR1Q86UQ5 136 aa5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 LYPD6Q86Y78 171 aa5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 PARP16Q8N5Y8 322 aa5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 ACBD7Q8N6N7 88 aa5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 C8orf31Q8N9H6 132 aa5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 OR1L1Q8NH94 360 aa5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 CT45A3Q8NHU0 189 aa5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 MYOZ3Q8TDC0 251 aa5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 FLYWCH2Q96CP2 140 aaKnown RBP5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 MRPS24Q96EL2 167 aaKnown RBP5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 RITA1Q96K30 269 aa5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 CLCC1Q96S66 551 aa5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 MYCBPQ99417 103 aaPredicted RBP5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 FAM103A1Q9BTL3 118 aaKnown RBP5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 ABHD14AQ9BUJ0 271 aa5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 MRPL20Q9BYC9 149 aaKnown RBP5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 TOLLIPQ9H0E2 274 aa5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 GABARAPL1Q9H0R8 117 aa5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 RETNQ9HD89 108 aa5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 OR2S2Q9NQN1 319 aa5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 ETAA1Q9NY74 926 aa5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 KCNIP1Q9NZI2 227 aa5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 STUB1Q9UNE7 303 aa5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 FOXA2Q9Y261 457 aaPredicted RBP5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 DNAH7Q8WXX0 4024 aa5.15□□□□□ -1.59
RTFDC1-206ENST00000477485 A0A1W2PP11 408 aa5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 UBE2QL1A1L167 161 aa5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 ANKRD34BA5PLL1 514 aa5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 SNTNA6NMZ2 147 aa5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 E9PI62 339 aa5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 H7C2Y5 167 aa5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 LANCL1O43813 399 aa5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 MT-ND4P03905 459 aa5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 HSPB1P04792 205 aaKnown RBP5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 GTF2F2P13984 249 aa5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 PPP1CCP36873 323 aaKnown RBP5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 VEGFCP49767 419 aa5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 PAX5Q02548 391 aa5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 KIAA0141Q14154 515 aaPredicted RBP5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 GNMTQ14749 295 aa5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 HAGHQ16775 308 aa5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 C5orf64Q2M2E5 130 aa5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 MPV17LQ2QL34 196 aa5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 ZIK1Q3SY52 487 aaPredicted RBP5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 ACTBL2Q562R1 376 aa5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 RAB12Q6IQ22 244 aa5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 UNQ5815/PRO19632Q6UWF5 114 aa5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 FAM131AQ6UXB0 335 aa5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 LINC00596Q86U02 117 aa5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 ZNF439Q8NDP4 499 aa5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 OR52L2PQ8NGH6 319 aa5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 TMEM106AQ96A25 262 aa5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 LGALS12Q96DT0 336 aa5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 JAM3Q9BX67 310 aa5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 GABARAPL3Q9BY60 117 aa5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 FBXL15Q9H469 300 aa5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 PAK1IP1Q9NWT1 392 aaPredicted RBP5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 NKX1-2Q9UD57 310 aaPredicted RBP5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 AASSQ9UDR5 926 aa5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 ZNF580Q9UK33 172 aa5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 RNF150Q9ULK6 438 aa5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 OAZ3Q9UMX2 235 aa5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 FBXO7Q9Y3I1 522 aa5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 AP4S1Q9Y587 144 aa5.14□□□□□ -1.59
RTFDC1-206ENST00000477485 SAA2-SAA4A0A096LPE2 208 aa5.13□□□□□ -1.59
RTFDC1-206ENST00000477485 C13orf42A0A1B0GVH6 325 aa5.13□□□□□ -1.59
RTFDC1-206ENST00000477485 FAM90A10PA6NDY2 464 aa5.13□□□□□ -1.59
RTFDC1-206ENST00000477485 SOX15O60248 233 aa5.13□□□□□ -1.59
RTFDC1-206ENST00000477485 ZNF780AO75290 641 aaPredicted RBP5.13□□□□□ -1.59
RTFDC1-206ENST00000477485 TRGV3P03979 118 aa5.13□□□□□ -1.59
RTFDC1-206ENST00000477485 GSTP1P09211 210 aaKnown RBP5.13□□□□□ -1.59
RTFDC1-206ENST00000477485 SAA2P0DJI9 122 aaPredicted RBP5.13□□□□□ -1.59
RTFDC1-206ENST00000477485 FCGR1AP12314 374 aa5.13□□□□□ -1.59
RTFDC1-206ENST00000477485 RCC1P18754 421 aaPredicted RBP5.13□□□□□ -1.59
RTFDC1-206ENST00000477485 BDKRB2P30411 391 aa5.13□□□□□ -1.59
RTFDC1-206ENST00000477485 VHLP40337 213 aa5.13□□□□□ -1.59
RTFDC1-206ENST00000477485 OR3A3P47888 321 aa5.13□□□□□ -1.59
RTFDC1-206ENST00000477485 GTF2A1P52655 376 aaPredicted RBP5.13□□□□□ -1.59
RTFDC1-206ENST00000477485 ZNF137PP52743 207 aa5.13□□□□□ -1.59
RTFDC1-206ENST00000477485 ADARB1P78563 741 aaKnown RBP5.13□□□□□ -1.59
RTFDC1-206ENST00000477485 NDPQ00604 133 aa5.13□□□□□ -1.59
RTFDC1-206ENST00000477485 TMEM267Q0VDI3 215 aaPredicted RBP5.13□□□□□ -1.59
RTFDC1-206ENST00000477485 TMEM30BQ3MIR4 351 aa5.13□□□□□ -1.59
RTFDC1-206ENST00000477485 Q3ZCU0 254 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms