RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 LHFPL5Q8TAF8 219 aa9.47□□□□□ -0.89
COL27A1-204ENST00000477421 MOB3AQ96BX8 217 aa9.47□□□□□ -0.89
COL27A1-204ENST00000477421 RNF126Q9BV68 326 aa9.47□□□□□ -0.89
COL27A1-204ENST00000477421 XIRP2A4UGR9 3374 aa9.46□□□□□ -0.89
COL27A1-204ENST00000477421 IGKV1-12A0A0C4DH73 117 aa9.46□□□□□ -0.89
COL27A1-204ENST00000477421 ZNF716A6NP11 495 aa9.46□□□□□ -0.89
COL27A1-204ENST00000477421 PROB1E7EW31 1015 aa9.46□□□□□ -0.89
COL27A1-204ENST00000477421 IGKV1D-12P01611 117 aa9.46□□□□□ -0.89
COL27A1-204ENST00000477421 FTH1P19P0C7X4 201 aa9.46□□□□□ -0.89
COL27A1-204ENST00000477421 UCP2P55851 309 aa9.46□□□□□ -0.89
COL27A1-204ENST00000477421 ZNF528Q3MIS6 628 aa9.46□□□□□ -0.89
COL27A1-204ENST00000477421 POC1AQ8NBT0 407 aa9.46□□□□□ -0.89
COL27A1-204ENST00000477421 NTNG2Q96CW9 530 aa9.46□□□□□ -0.89
COL27A1-204ENST00000477421 RAB9BQ9NP90 201 aa9.46□□□□□ -0.89
COL27A1-204ENST00000477421 ATPIF1Q9UII2 106 aa9.46□□□□□ -0.89
COL27A1-204ENST00000477421 V9GYS6 101 aa9.46□□□□□ -0.89
COL27A1-204ENST00000477421 MAP1LC3B2A6NCE7 125 aa9.46□□□□□ -0.9
COL27A1-204ENST00000477421 RBFOX3A6NFN3 312 aa9.46□□□□□ -0.9
COL27A1-204ENST00000477421 LRRC3CA6NJW4 275 aa9.46□□□□□ -0.9
COL27A1-204ENST00000477421 WNT9BO14905 357 aa9.46□□□□□ -0.9
COL27A1-204ENST00000477421 CELA3BP08861 270 aa9.46□□□□□ -0.9
COL27A1-204ENST00000477421 Q0VFX4 171 aa9.46□□□□□ -0.9
COL27A1-204ENST00000477421 KCNMB1Q16558 191 aa9.46□□□□□ -0.9
COL27A1-204ENST00000477421 RBM14Q96PK6 669 aaKnown RBP9.46□□□□□ -0.9
COL27A1-204ENST00000477421 MAP1LC3BQ9GZQ8 125 aa9.46□□□□□ -0.9
COL27A1-204ENST00000477421 TMEM222Q9H0R3 208 aa9.46□□□□□ -0.9
COL27A1-204ENST00000477421 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.46□□□□□ -0.9
COL27A1-204ENST00000477421 AURKAIP1Q9NWT8 199 aaPredicted RBP9.46□□□□□ -0.9
COL27A1-204ENST00000477421 MTCH1Q9NZJ7 389 aa9.46□□□□□ -0.9
COL27A1-204ENST00000477421 CLN8Q9UBY8 286 aa9.46□□□□□ -0.9
COL27A1-204ENST00000477421 POMT1Q9Y6A1 747 aa9.46□□□□□ -0.9
COL27A1-204ENST00000477421 LDLRAD4O15165 306 aa9.46□□□□□ -0.9
COL27A1-204ENST00000477421 NAAAQ02083 359 aa9.46□□□□□ -0.9
COL27A1-204ENST00000477421 MARS2Q96GW9 593 aaKnown RBP9.46□□□□□ -0.9
COL27A1-204ENST00000477421 HSF4Q9ULV5 492 aa9.46□□□□□ -0.9
COL27A1-204ENST00000477421 TRIOO75962 3097 aa9.45□□□□□ -0.9
COL27A1-204ENST00000477421 IGLV3-32A0A0A0MS00 114 aa9.45□□□□□ -0.9
COL27A1-204ENST00000477421 TFF1P04155 84 aa9.45□□□□□ -0.9
COL27A1-204ENST00000477421 HOXD4P09016 255 aaPredicted RBP9.45□□□□□ -0.9
COL27A1-204ENST00000477421 COX5AP20674 150 aa9.45□□□□□ -0.9
COL27A1-204ENST00000477421 FOXO1Q12778 655 aa9.45□□□□□ -0.9
COL27A1-204ENST00000477421 ZNF385CQ66K41 422 aaPredicted RBP9.45□□□□□ -0.9
COL27A1-204ENST00000477421 IGF2-ASQ6U949 168 aa9.45□□□□□ -0.9
COL27A1-204ENST00000477421 OR1L1Q8NH94 360 aa9.45□□□□□ -0.9
COL27A1-204ENST00000477421 ADAMTS17Q8TE56 1095 aa9.45□□□□□ -0.9
COL27A1-204ENST00000477421 AQP10Q96PS8 301 aa9.45□□□□□ -0.9
COL27A1-204ENST00000477421 DDA1Q9BW61 102 aa9.45□□□□□ -0.9
COL27A1-204ENST00000477421 CEP295Q9C0D2 2601 aa9.45□□□□□ -0.9
COL27A1-204ENST00000477421 LRRC30A6NM36 301 aa9.45□□□□□ -0.9
COL27A1-204ENST00000477421 NTN3O00634 580 aaPredicted RBP9.45□□□□□ -0.9
COL27A1-204ENST00000477421 SPP1P10451 314 aa9.45□□□□□ -0.9
COL27A1-204ENST00000477421 H3F3AP84243 136 aa9.45□□□□□ -0.9
COL27A1-204ENST00000477421 FABP9Q0Z7S8 132 aa9.45□□□□□ -0.9
COL27A1-204ENST00000477421 FFAR4Q5NUL3 377 aa9.45□□□□□ -0.9
COL27A1-204ENST00000477421 GFRALQ6UXV0 394 aa9.45□□□□□ -0.9
COL27A1-204ENST00000477421 ZGRF1Q86YA3 2104 aa9.45□□□□□ -0.9
COL27A1-204ENST00000477421 LDLRAD3Q86YD5 345 aa9.45□□□□□ -0.9
COL27A1-204ENST00000477421 NABP1Q96AH0 204 aa9.45□□□□□ -0.9
COL27A1-204ENST00000477421 RNF122Q9H9V4 155 aa9.45□□□□□ -0.9
COL27A1-204ENST00000477421 NEURL1O76050 574 aa9.45□□□□□ -0.9
COL27A1-204ENST00000477421 ACP1P24666 158 aa9.45□□□□□ -0.9
COL27A1-204ENST00000477421 SRSF3P84103 164 aaKnown RBP9.45□□□□□ -0.9
COL27A1-204ENST00000477421 GMPPAQ96IJ6 420 aaPredicted RBP9.45□□□□□ -0.9
COL27A1-204ENST00000477421 SEC11CQ9BY50 192 aa9.45□□□□□ -0.9
COL27A1-204ENST00000477421 PNRC2Q9NPJ4 139 aaKnown RBP9.45□□□□□ -0.9
COL27A1-204ENST00000477421 IGKV1-27A0A075B6S5 117 aa9.44□□□□□ -0.9
COL27A1-204ENST00000477421 ZNF705FA8MVS1 300 aaPredicted RBP9.44□□□□□ -0.9
COL27A1-204ENST00000477421 F8VVB4 439 aa9.44□□□□□ -0.9
COL27A1-204ENST00000477421 F8VWA3 439 aa9.44□□□□□ -0.9
COL27A1-204ENST00000477421 OR7C2O60412 319 aa9.44□□□□□ -0.9
COL27A1-204ENST00000477421 PGLYRP1O75594 196 aaPredicted RBP9.44□□□□□ -0.9
COL27A1-204ENST00000477421 ZNF705DP0CH99 300 aaPredicted RBP9.44□□□□□ -0.9
COL27A1-204ENST00000477421 ZNF705BP0CI00 300 aaPredicted RBP9.44□□□□□ -0.9
COL27A1-204ENST00000477421 MGST1P10620 155 aaKnown RBP9.44□□□□□ -0.9
COL27A1-204ENST00000477421 SULT1A2P50226 295 aa9.44□□□□□ -0.9
COL27A1-204ENST00000477421 RAB13P51153 203 aa9.44□□□□□ -0.9
COL27A1-204ENST00000477421 KLF3P57682 345 aaPredicted RBP9.44□□□□□ -0.9
COL27A1-204ENST00000477421 CCL8P80075 99 aa9.44□□□□□ -0.9
COL27A1-204ENST00000477421 TMEM187Q14656 261 aa9.44□□□□□ -0.9
COL27A1-204ENST00000477421 ETV3LQ6ZN32 361 aa9.44□□□□□ -0.9
COL27A1-204ENST00000477421 MOB1BQ7L9L4 216 aa9.44□□□□□ -0.9
COL27A1-204ENST00000477421 OR10X1Q8NGY0 326 aa9.44□□□□□ -0.9
COL27A1-204ENST00000477421 ACTR3CQ9C0K3 210 aaPredicted RBP9.44□□□□□ -0.9
COL27A1-204ENST00000477421 PRDM14Q9GZV8 571 aa9.44□□□□□ -0.9
COL27A1-204ENST00000477421 LAMP3Q9UQV4 416 aa9.44□□□□□ -0.9
COL27A1-204ENST00000477421 PPP5D1E7EU14 171 aa9.44□□□□□ -0.9
COL27A1-204ENST00000477421 TMPRSS2O15393 492 aa9.44□□□□□ -0.9
COL27A1-204ENST00000477421 MDKP21741 143 aaPredicted RBP9.44□□□□□ -0.9
COL27A1-204ENST00000477421 HTD2P86397 168 aa9.44□□□□□ -0.9
COL27A1-204ENST00000477421 MRPL41Q8IXM3 137 aaKnown RBP9.44□□□□□ -0.9
COL27A1-204ENST00000477421 ZNF561Q8N587 486 aa9.44□□□□□ -0.9
COL27A1-204ENST00000477421 CISD2Q8N5K1 135 aaKnown RBP9.44□□□□□ -0.9
COL27A1-204ENST00000477421 TMEM68Q96MH6 324 aa9.44□□□□□ -0.9
COL27A1-204ENST00000477421 PATZ1Q9HBE1 687 aaKnown RBP9.44□□□□□ -0.9
COL27A1-204ENST00000477421 TECTAO75443 2155 aa9.44□□□□□ -0.9
COL27A1-204ENST00000477421 CHD9Q3L8U1 2897 aa9.44□□□□□ -0.9
COL27A1-204ENST00000477421 TRGV10A0A0A0MS01 117 aa9.44□□□□□ -0.9
COL27A1-204ENST00000477421 FBP1P09467 338 aa9.44□□□□□ -0.9
COL27A1-204ENST00000477421 SEC11BP0C7V7 166 aa9.44□□□□□ -0.9
COL27A1-204ENST00000477421 SUPT4H1P63272 117 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms