RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 A0A0A6YYH2 397 aa12.87□□□□□ -0.35
COPS3-207ENST00000477299 A0A1B0GX30 115 aa12.87□□□□□ -0.35
COPS3-207ENST00000477299 A6NJ64 397 aa12.87□□□□□ -0.35
COPS3-207ENST00000477299 SCGNO76038 276 aa12.87□□□□□ -0.35
COPS3-207ENST00000477299 IGLV1-47P01700 117 aa12.87□□□□□ -0.35
COPS3-207ENST00000477299 CD34P28906 385 aa12.87□□□□□ -0.35
COPS3-207ENST00000477299 TALDO1P37837 337 aa12.87□□□□□ -0.35
COPS3-207ENST00000477299 GNG2P59768 71 aa12.87□□□□□ -0.35
COPS3-207ENST00000477299 DIAPH2-AS1Q14236 149 aa12.87□□□□□ -0.35
COPS3-207ENST00000477299 PNLIPRP3Q17RR3 467 aa12.87□□□□□ -0.35
COPS3-207ENST00000477299 OR52W1Q6IF63 320 aa12.87□□□□□ -0.35
COPS3-207ENST00000477299 CNIH2Q6PI25 160 aa12.87□□□□□ -0.35
COPS3-207ENST00000477299 C9orf139Q6ZV77 190 aa12.87□□□□□ -0.35
COPS3-207ENST00000477299 SNX29P2Q8IUI4 249 aa12.87□□□□□ -0.35
COPS3-207ENST00000477299 DUX5Q96PT3 197 aa12.87□□□□□ -0.35
COPS3-207ENST00000477299 ESM1Q9NQ30 184 aa12.87□□□□□ -0.35
COPS3-207ENST00000477299 NDUFA13Q9P0J0 144 aa12.87□□□□□ -0.35
COPS3-207ENST00000477299 EXTL2Q9UBQ6 330 aa12.87□□□□□ -0.35
COPS3-207ENST00000477299 TRDCB7Z8K6 153 aa12.86□□□□□ -0.35
COPS3-207ENST00000477299 J3QR06 171 aa12.86□□□□□ -0.35
COPS3-207ENST00000477299 TNFSF8P32971 234 aa12.86□□□□□ -0.35
COPS3-207ENST00000477299 MRPS15P82914 257 aaKnown RBP12.86□□□□□ -0.35
COPS3-207ENST00000477299 MORN2Q502X0 79 aa12.86□□□□□ -0.35
COPS3-207ENST00000477299 PLA1AQ53H76 456 aa12.86□□□□□ -0.35
COPS3-207ENST00000477299 RNASE12Q5GAN4 147 aaKnown RBP12.86□□□□□ -0.35
COPS3-207ENST00000477299 CT45A1Q5HYN5 189 aa12.86□□□□□ -0.35
COPS3-207ENST00000477299 TRAT1Q6PIZ9 186 aa12.86□□□□□ -0.35
COPS3-207ENST00000477299 ZNF439Q8NDP4 499 aa12.86□□□□□ -0.35
COPS3-207ENST00000477299 OR10A7Q8NGE5 316 aa12.86□□□□□ -0.35
COPS3-207ENST00000477299 CT45A3Q8NHU0 189 aa12.86□□□□□ -0.35
COPS3-207ENST00000477299 ABHD1Q96SE0 405 aa12.86□□□□□ -0.35
COPS3-207ENST00000477299 OR2S2Q9NQN1 319 aa12.86□□□□□ -0.35
COPS3-207ENST00000477299 GNG12Q9UBI6 72 aa12.86□□□□□ -0.35
COPS3-207ENST00000477299 HILPDAQ9Y5L2 63 aa12.86□□□□□ -0.35
COPS3-207ENST00000477299 TOR1AO14656 332 aa12.85□□□□□ -0.35
COPS3-207ENST00000477299 FABP7O15540 132 aa12.85□□□□□ -0.35
COPS3-207ENST00000477299 VENTXO95231 258 aa12.85□□□□□ -0.35
COPS3-207ENST00000477299 RAB13P51153 203 aa12.85□□□□□ -0.35
COPS3-207ENST00000477299 HLA-DRB5Q30154 266 aa12.85□□□□□ -0.35
COPS3-207ENST00000477299 MOB1BQ7L9L4 216 aa12.85□□□□□ -0.35
COPS3-207ENST00000477299 TEX29Q8N6K0 151 aa12.85□□□□□ -0.35
COPS3-207ENST00000477299 OR52M1Q8NGK5 317 aa12.85□□□□□ -0.35
COPS3-207ENST00000477299 OR9G1Q8NH87 305 aa12.85□□□□□ -0.35
COPS3-207ENST00000477299 GALMQ96C23 342 aa12.85□□□□□ -0.35
COPS3-207ENST00000477299 TNFRSF19Q9NS68 423 aa12.85□□□□□ -0.35
COPS3-207ENST00000477299 SLC23A1Q9UHI7 598 aa12.85□□□□□ -0.35
COPS3-207ENST00000477299 LY6LH3BQJ8 138 aa12.84□□□□□ -0.35
COPS3-207ENST00000477299 DTYMKP23919 212 aa12.84□□□□□ -0.35
COPS3-207ENST00000477299 PRSS3P35030 304 aa12.84□□□□□ -0.35
COPS3-207ENST00000477299 MNDAP41218 407 aa12.84□□□□□ -0.35
COPS3-207ENST00000477299 LGALS4P56470 323 aa12.84□□□□□ -0.35
COPS3-207ENST00000477299 HTD2P86397 168 aa12.84□□□□□ -0.35
COPS3-207ENST00000477299 ARL6IP1Q15041 203 aa12.84□□□□□ -0.35
COPS3-207ENST00000477299 SSX2Q16385 188 aa12.84□□□□□ -0.35
COPS3-207ENST00000477299 KRTAP21-3Q3LHN1 58 aa12.84□□□□□ -0.35
COPS3-207ENST00000477299 MIDNQ504T8 468 aa12.84□□□□□ -0.35
COPS3-207ENST00000477299 FBLN7Q53RD9 439 aa12.84□□□□□ -0.35
COPS3-207ENST00000477299 ZNF554Q86TJ5 538 aa12.84□□□□□ -0.35
COPS3-207ENST00000477299 DIRAS2Q96HU8 199 aa12.84□□□□□ -0.35
COPS3-207ENST00000477299 OCSTAMPQ9BR26 566 aa12.84□□□□□ -0.35
COPS3-207ENST00000477299 MMP28Q9H239 520 aa12.84□□□□□ -0.35
COPS3-207ENST00000477299 BUB1B-PAK6H3BSN5 160 aa12.83□□□□□ -0.36
COPS3-207ENST00000477299 BET1O15155 118 aa12.83□□□□□ -0.36
COPS3-207ENST00000477299 IGHV4-59P01825 116 aa12.83□□□□□ -0.36
COPS3-207ENST00000477299 CEACAM6P40199 344 aa12.83□□□□□ -0.36
COPS3-207ENST00000477299 BPIFB3P59826 476 aa12.83□□□□□ -0.36
COPS3-207ENST00000477299 Q6YL49 198 aa12.83□□□□□ -0.36
COPS3-207ENST00000477299 LDLRAD3Q86YD5 345 aa12.83□□□□□ -0.36
COPS3-207ENST00000477299 ZDHHC22Q8N966 263 aa12.83□□□□□ -0.36
COPS3-207ENST00000477299 BEND2Q8NDZ0 799 aa12.83□□□□□ -0.36
COPS3-207ENST00000477299 ZNF596Q8TC21 504 aa12.83□□□□□ -0.36
COPS3-207ENST00000477299 GPX8Q8TED1 209 aa12.83□□□□□ -0.36
COPS3-207ENST00000477299 TAF15Q92804 592 aaKnown RBP eCLIP12.83□□□□□ -0.36
COPS3-207ENST00000477299 SNAPC3Q92966 411 aa12.83□□□□□ -0.36
COPS3-207ENST00000477299 PRDM13Q9H4Q3 707 aa12.83□□□□□ -0.36
COPS3-207ENST00000477299 FAM96BQ9Y3D0 163 aa12.83□□□□□ -0.36
COPS3-207ENST00000477299 ST8SIA5O15466 376 aa12.82□□□□□ -0.36
COPS3-207ENST00000477299 HOXA3O43365 443 aaPredicted RBP12.82□□□□□ -0.36
COPS3-207ENST00000477299 YPEL1O60688 119 aa12.82□□□□□ -0.36
COPS3-207ENST00000477299 CD24P25063 80 aa12.82□□□□□ -0.36
COPS3-207ENST00000477299 HTR1DP28221 377 aa12.82□□□□□ -0.36
COPS3-207ENST00000477299 PRRX1P54821 245 aa12.82□□□□□ -0.36
COPS3-207ENST00000477299 PITPNAQ00169 270 aa12.82□□□□□ -0.36
COPS3-207ENST00000477299 CNPY1Q3B7I2 92 aa12.82□□□□□ -0.36
COPS3-207ENST00000477299 Q6ZS49 121 aa12.82□□□□□ -0.36
COPS3-207ENST00000477299 SLC25A48Q6ZT89 311 aaKnown RBP12.82□□□□□ -0.36
COPS3-207ENST00000477299 HOGA1Q86XE5 327 aa12.82□□□□□ -0.36
COPS3-207ENST00000477299 ODF3L1Q8IXM7 274 aa12.82□□□□□ -0.36
COPS3-207ENST00000477299 BEST4Q8NFU0 473 aa12.82□□□□□ -0.36
COPS3-207ENST00000477299 OR4A4PQ8NGN8 299 aa12.82□□□□□ -0.36
COPS3-207ENST00000477299 OR52I2Q8NH67 350 aa12.82□□□□□ -0.36
COPS3-207ENST00000477299 ZDHHC16Q969W1 377 aa12.82□□□□□ -0.36
COPS3-207ENST00000477299 YPEL2Q96QA6 119 aa12.82□□□□□ -0.36
COPS3-207ENST00000477299 SOSTQ9BQB4 213 aa12.82□□□□□ -0.36
COPS3-207ENST00000477299 C11orf54Q9H0W9 315 aaPredicted RBP12.82□□□□□ -0.36
COPS3-207ENST00000477299 MMP27Q9H306 513 aa12.82□□□□□ -0.36
COPS3-207ENST00000477299 JPT1Q9UK76 154 aa12.82□□□□□ -0.36
COPS3-207ENST00000477299 RNF150Q9ULK6 438 aa12.82□□□□□ -0.36
COPS3-207ENST00000477299 TBL2Q9Y4P3 447 aaKnown RBP12.82□□□□□ -0.36
COPS3-207ENST00000477299 TRBV6-7A0A0A0MS04 114 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms