RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 TMEM54Q969K7 222 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 BOD1Q96IK1 185 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 TBX15Q96SF7 602 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 ELL3Q9HB65 397 aaPredicted RBP7.2□□□□□ -1.26
VAPB-205ENST00000476395 MSL2Q9HCI7 577 aa7.2□□□□□ -1.26
VAPB-205ENST00000476395 IGKV1-12A0A0C4DH73 117 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 TRBV11-1A0A0K0K1C0 115 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 ZNF716A6NP11 495 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 SERPINE3A8MV23 424 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 IGKV1D-12P01611 117 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 TMEM225BP0DP42 221 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 GABRR1P24046 479 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 RND2P52198 227 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 ZNF154Q13106 437 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 WDR74Q6RFH5 385 aaPredicted RBP7.19□□□□□ -1.26
VAPB-205ENST00000476395 ZNF573Q86YE8 665 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 OR2C3Q8N628 320 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 IL22RA1Q8N6P7 574 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 STXBP6Q8NFX7 210 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 OR1L6Q8NGR2 347 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 MRGPRDQ8TDS7 321 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 FKBP11Q9NYL4 201 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 KIR2DL5BA0A0G2JN68 375 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 KIR2DL5BA0A0G2JPC4 375 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 PROB1E7EW31 1015 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 ZNF20P17024 532 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 DYNLT3P51808 116 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 CXorf66Q5JRM2 361 aaPredicted RBP7.19□□□□□ -1.26
VAPB-205ENST00000476395 ZNF506Q5JVG8 444 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 C10orf128Q5T292 105 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 C1orf194Q5T5A4 169 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 VWA1Q6PCB0 445 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 DOK3Q7L591 496 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 KIR2DL5AQ8N109 375 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 DEFB123Q8N688 67 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 LFNGQ8NES3 379 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 PIMREGQ9BSJ6 248 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 RSG1Q9BU20 258 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 RNF115Q9Y4L5 304 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 LOC400499M0QZD8 3231 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 NKX2-6A6NCS4 301 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 AQP7O14520 342 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 RHBDL1O75783 438 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 GCGP01275 180 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 IGHG1P01857 330 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 CRYGSP22914 178 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 CDKN1AP38936 164 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 CLRN1P58418 232 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 TMEM187Q14656 261 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 UEVLDQ8IX04 471 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 ZNF100Q8IYN0 542 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 RTN4IP1Q8WWV3 396 aaPredicted RBP7.19□□□□□ -1.26
VAPB-205ENST00000476395 C18orf12Q96KH6 178 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 ZNF703Q9H7S9 590 aaPredicted RBP7.19□□□□□ -1.26
VAPB-205ENST00000476395 SH2D2AQ9NP31 389 aa7.19□□□□□ -1.26
VAPB-205ENST00000476395 MRPS17Q9Y2R5 130 aaKnown RBP7.19□□□□□ -1.26
VAPB-205ENST00000476395 DOCK11Q5JSL3 2073 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 A0A1B0GW15 77 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 A0A1B0GW64 132 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 A0A1W2PQM1 296 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 CCL25O15444 150 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 HSPB1P04792 205 aaKnown RBP7.18□□□□□ -1.26
VAPB-205ENST00000476395 METTL15P1P0C7V9 234 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 GLB1P16278 677 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 CCNOP22674 350 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 EIF3IQ13347 325 aaKnown RBP7.18□□□□□ -1.26
VAPB-205ENST00000476395 TAF9Q16594 264 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 FBXW9Q5XUX1 488 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 CMTM1Q8IZ96 169 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 ZBTB34Q8NCN2 500 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 MSI2Q96DH6 328 aaKnown RBP7.18□□□□□ -1.26
VAPB-205ENST00000476395 OXGR1Q96P68 337 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 RASL10BQ96S79 203 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 SMG1Q96Q15 3661 aaKnown RBP7.18□□□□□ -1.26
VAPB-205ENST00000476395 TRBV24-1A0A075B6N3 115 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 IGHV3-15A0A0B4J1V0 119 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 GRIFINA4D1Z8 144 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 SMAD7O15105 426 aaKnown RBP7.18□□□□□ -1.26
VAPB-205ENST00000476395 IL6RP08887 468 aaPredicted RBP7.18□□□□□ -1.26
VAPB-205ENST00000476395 TNFSF4P23510 183 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 FAM3BP58499 235 aaPredicted RBP7.18□□□□□ -1.26
VAPB-205ENST00000476395 MRPS34P82930 218 aaKnown RBP7.18□□□□□ -1.26
VAPB-205ENST00000476395 GAGE1Q13065 139 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 IQCJQ1A5X6 159 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 TOMM20LQ6UXN7 152 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 ASCL4Q6XD76 172 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 NAT6Q93015 286 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 TP53RKQ96S44 253 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 OR2J1Q9GZK6 312 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 NAGKQ9UJ70 344 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 RNF114Q9Y508 228 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 LOC102723971A0A1B0GUV8 181 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 PHF1O43189 567 aaPredicted RBP7.18□□□□□ -1.26
VAPB-205ENST00000476395 RBMXL2O75526 392 aaKnown RBP7.18□□□□□ -1.26
VAPB-205ENST00000476395 DHRS3O75911 302 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 CD82P27701 267 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 MMDQ15546 238 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 IZUMO4Q1ZYL8 232 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 OR14L1PQ8NHC6 308 aa7.18□□□□□ -1.26
VAPB-205ENST00000476395 KCNE4Q8WWG9 221 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms