RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 PDCD1LG2Q9BQ51 273 aa2.38□□□□□ -2.03
PTCD3-211ENST00000476215 SNRNP25Q9BV90 132 aaKnown RBP2.38□□□□□ -2.03
PTCD3-211ENST00000476215 OR51B5Q9H339 312 aa2.38□□□□□ -2.03
PTCD3-211ENST00000476215 RBM22Q9NW64 420 aaKnown RBP eCLIP2.38□□□□□ -2.03
PTCD3-211ENST00000476215 ZMAT5Q9UDW3 170 aaKnown RBP2.38□□□□□ -2.03
PTCD3-211ENST00000476215 VAX2Q9UIW0 290 aa2.38□□□□□ -2.03
PTCD3-211ENST00000476215 ENPP4Q9Y6X5 453 aa2.38□□□□□ -2.03
PTCD3-211ENST00000476215 ITPR2Q14571 2701 aa2.38□□□□□ -2.03
PTCD3-211ENST00000476215 USP9XQ93008 2570 aaPredicted RBP2.37□□□□□ -2.03
PTCD3-211ENST00000476215 HIVEP2P31629 2446 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 TRAV8-4A0A0B4J246 113 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 TRAV8-6A0A0B4J262 113 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 A0A0G2JMP0 313 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 A0A0J9YYE9 177 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 A0A0X1KG70 313 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 TMEM72A0PK05 275 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 CENPXA8MT69 81 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 D6RAR5 112 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 J3QKU1 62 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 PSMD11O00231 422 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 ZW10O43264 779 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 PROSCO94903 275 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 SOD1P00441 154 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 GCGP01275 180 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 P01737 135 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 TRBC1P01850 177 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 KLK1P06870 262 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 CCL4P13236 92 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 KDELR1P24390 212 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 HLA-DMAP28067 261 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 TGM4P49221 684 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 BCAP31P51572 246 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 STC1P52823 247 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 MAXP61244 160 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 RPL26P61254 145 aaKnown RBP2.37□□□□□ -2.03
PTCD3-211ENST00000476215 GRB2P62993 217 aaKnown RBP2.37□□□□□ -2.03
PTCD3-211ENST00000476215 PAFAH1B3Q15102 231 aaKnown RBP2.37□□□□□ -2.03
PTCD3-211ENST00000476215 PDK2Q15119 407 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 LINC00303Q3SY05 128 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 PYCR3Q53H96 274 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 TMEM69Q5SWH9 247 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 ZNF678Q5SXM1 525 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 THOC7Q6I9Y2 204 aaKnown RBP2.37□□□□□ -2.03
PTCD3-211ENST00000476215 ATPAF2Q8N5M1 289 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 CYB561A3Q8NBI2 242 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 OR8K1Q8NGG5 319 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 TCP10LQ8TDR4 215 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 PDCD6IPQ8WUM4 868 aaKnown RBP2.37□□□□□ -2.03
PTCD3-211ENST00000476215 PATE1Q8WXA2 126 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 BAALCQ8WXS3 180 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 HGDQ93099 445 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 COX14Q96I36 57 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 ANP32EQ9BTT0 268 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 MS4A8Q9BY19 250 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 IL22Q9GZX6 179 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 STMN4Q9H169 189 aaPredicted RBP2.37□□□□□ -2.03
PTCD3-211ENST00000476215 ARMC7Q9H6L4 198 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 IFNKQ9P0W0 207 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 ZNF229Q9UJW7 825 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 RPL26L1Q9UNX3 145 aaKnown RBP2.37□□□□□ -2.03
PTCD3-211ENST00000476215 PTPN13Q12923 2485 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 SPTAN1Q13813 2472 aaKnown RBP2.37□□□□□ -2.03
PTCD3-211ENST00000476215 CELSR2Q9HCU4 2923 aa2.37□□□□□ -2.03
PTCD3-211ENST00000476215 LRBAP50851 2863 aa2.36□□□□□ -2.03
PTCD3-211ENST00000476215 TACC2O95359 2948 aa2.36□□□□□ -2.03
PTCD3-211ENST00000476215 A0A1W2PNN7 141 aa2.36□□□□□ -2.03
PTCD3-211ENST00000476215 OR5K4A6NMS3 321 aa2.36□□□□□ -2.03
PTCD3-211ENST00000476215 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.36□□□□□ -2.03
PTCD3-211ENST00000476215 GYPCP04921 128 aa2.36□□□□□ -2.03
PTCD3-211ENST00000476215 KRT7P08729 469 aa2.36□□□□□ -2.03
PTCD3-211ENST00000476215 P0C880 135 aa2.36□□□□□ -2.03
PTCD3-211ENST00000476215 LIPCP11150 499 aa2.36□□□□□ -2.03
PTCD3-211ENST00000476215 ACTR1BP42025 376 aa2.36□□□□□ -2.03
PTCD3-211ENST00000476215 SPINT3P49223 89 aa2.36□□□□□ -2.03
PTCD3-211ENST00000476215 TPM4P67936 248 aa2.36□□□□□ -2.03
PTCD3-211ENST00000476215 C2orf54Q08AI8 447 aa2.36□□□□□ -2.03
PTCD3-211ENST00000476215 SRSF6Q13247 344 aaKnown RBP2.36□□□□□ -2.03
PTCD3-211ENST00000476215 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.36□□□□□ -2.03
PTCD3-211ENST00000476215 NCBP2-AS2Q69YL0 99 aa2.36□□□□□ -2.03
PTCD3-211ENST00000476215 OR2W3Q7Z3T1 314 aa2.36□□□□□ -2.03
PTCD3-211ENST00000476215 NT5DC3Q86UY8 548 aa2.36□□□□□ -2.03
PTCD3-211ENST00000476215 ZCCHC24Q8N2G6 241 aaKnown RBP2.36□□□□□ -2.03
PTCD3-211ENST00000476215 RNF10Q8N5U6 811 aaKnown RBP2.36□□□□□ -2.03
PTCD3-211ENST00000476215 OR5T3Q8NGG3 340 aa2.36□□□□□ -2.03
PTCD3-211ENST00000476215 ZNF420Q8TAQ5 688 aaPredicted RBP2.36□□□□□ -2.03
PTCD3-211ENST00000476215 TMEM234Q8WY98 164 aa2.36□□□□□ -2.03
PTCD3-211ENST00000476215 YIPF6Q96EC8 236 aa2.36□□□□□ -2.03
PTCD3-211ENST00000476215 IMP4Q96G21 291 aaKnown RBP2.36□□□□□ -2.03
PTCD3-211ENST00000476215 TRIB3Q96RU7 358 aa2.36□□□□□ -2.03
PTCD3-211ENST00000476215 LYSMD1Q96S90 227 aa2.36□□□□□ -2.03
PTCD3-211ENST00000476215 RGCCQ9H4X1 137 aa2.36□□□□□ -2.03
PTCD3-211ENST00000476215 UCK1Q9HA47 277 aa2.36□□□□□ -2.03
PTCD3-211ENST00000476215 RDH14Q9HBH5 336 aa2.36□□□□□ -2.03
PTCD3-211ENST00000476215 PEF1Q9UBV8 284 aaKnown RBP2.36□□□□□ -2.03
PTCD3-211ENST00000476215 SLC23A2Q9UGH3 650 aa2.36□□□□□ -2.03
PTCD3-211ENST00000476215 HEY1Q9Y5J3 304 aa2.36□□□□□ -2.03
PTCD3-211ENST00000476215 PCYT1BQ9Y5K3 369 aaPredicted RBP2.36□□□□□ -2.03
PTCD3-211ENST00000476215 CRYBG3Q68DQ2 2970 aa2.36□□□□□ -2.03
PTCD3-211ENST00000476215 MAP1AP78559 2803 aaPredicted RBP2.35□□□□□ -2.03
PTCD3-211ENST00000476215 UNC79Q9P2D8 2635 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms