RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 DLL3Q9NYJ7 618 aa13.58□□□□□ -0.24
VARS2-207ENST00000476162 TRAV17A0A0B4J275 112 aa13.58□□□□□ -0.24
VARS2-207ENST00000476162 SEC14L6B5MCN3 397 aa13.58□□□□□ -0.24
VARS2-207ENST00000476162 E5RGE8 158 aa13.58□□□□□ -0.24
VARS2-207ENST00000476162 MKRN2OSH3BPM6 223 aa13.58□□□□□ -0.24
VARS2-207ENST00000476162 M0R036 132 aa13.58□□□□□ -0.24
VARS2-207ENST00000476162 MED6O75586 246 aa13.58□□□□□ -0.24
VARS2-207ENST00000476162 TUSC2O75896 110 aa13.58□□□□□ -0.24
VARS2-207ENST00000476162 GUSBP1Q15486 140 aa13.58□□□□□ -0.24
VARS2-207ENST00000476162 Q6ZT83 130 aa13.58□□□□□ -0.24
VARS2-207ENST00000476162 ERGIC1Q969X5 290 aa13.58□□□□□ -0.24
VARS2-207ENST00000476162 C20orf24Q9BUV8 137 aa13.58□□□□□ -0.24
VARS2-207ENST00000476162 RTL8AQ9BWD3 113 aa13.58□□□□□ -0.24
VARS2-207ENST00000476162 TMEM222Q9H0R3 208 aa13.58□□□□□ -0.24
VARS2-207ENST00000476162 PLEKHA2Q9HB19 425 aa13.58□□□□□ -0.24
VARS2-207ENST00000476162 NSG2Q9Y328 171 aa13.58□□□□□ -0.24
VARS2-207ENST00000476162 TMED3Q9Y3Q3 217 aa13.58□□□□□ -0.24
VARS2-207ENST00000476162 A0A1W2PPE2 198 aa13.57□□□□□ -0.24
VARS2-207ENST00000476162 J3QW42 95 aa13.57□□□□□ -0.24
VARS2-207ENST00000476162 DEGS1O15121 323 aa13.57□□□□□ -0.24
VARS2-207ENST00000476162 CTXN2P0C2S0 81 aa13.57□□□□□ -0.24
VARS2-207ENST00000476162 DEFB109BQ30KR1 87 aa13.57□□□□□ -0.24
VARS2-207ENST00000476162 PCSK4Q6UW60 755 aa13.57□□□□□ -0.24
VARS2-207ENST00000476162 SLC25A40Q8TBP6 338 aa13.57□□□□□ -0.24
VARS2-207ENST00000476162 UBE2J1Q9Y385 318 aaPredicted RBP13.57□□□□□ -0.24
VARS2-207ENST00000476162 ZNF318Q5VUA4 2279 aa13.57□□□□□ -0.24
VARS2-207ENST00000476162 SPENQ96T58 3664 aaKnown RBP13.56□□□□□ -0.24
VARS2-207ENST00000476162 IGHV3-64DA0A0J9YX35 117 aa13.56□□□□□ -0.24
VARS2-207ENST00000476162 AQP7O14520 342 aa13.56□□□□□ -0.24
VARS2-207ENST00000476162 HSD17B6O14756 317 aa13.56□□□□□ -0.24
VARS2-207ENST00000476162 KIR2DL2P43627 348 aaPredicted RBP13.56□□□□□ -0.24
VARS2-207ENST00000476162 UCP2P55851 309 aa13.56□□□□□ -0.24
VARS2-207ENST00000476162 RHEBQ15382 184 aa13.56□□□□□ -0.24
VARS2-207ENST00000476162 OR8G1Q15617 311 aa13.56□□□□□ -0.24
VARS2-207ENST00000476162 VWA1Q6PCB0 445 aa13.56□□□□□ -0.24
VARS2-207ENST00000476162 C9orf106Q8NAJ2 232 aa13.56□□□□□ -0.24
VARS2-207ENST00000476162 SCCPDHQ8NBX0 429 aa13.56□□□□□ -0.24
VARS2-207ENST00000476162 BSCL2Q96G97 398 aaPredicted RBP13.56□□□□□ -0.24
VARS2-207ENST00000476162 PARP11Q9NR21 331 aa13.56□□□□□ -0.24
VARS2-207ENST00000476162 CCL28Q9NRJ3 127 aa13.56□□□□□ -0.24
VARS2-207ENST00000476162 TRBV6-6A0A0A6YYG2 114 aa13.56□□□□□ -0.24
VARS2-207ENST00000476162 LRP5LA4QPB2 252 aa13.56□□□□□ -0.24
VARS2-207ENST00000476162 JTBO76095 146 aa13.56□□□□□ -0.24
VARS2-207ENST00000476162 SULT1A2P50226 295 aa13.56□□□□□ -0.24
VARS2-207ENST00000476162 RND3P61587 244 aa13.56□□□□□ -0.24
VARS2-207ENST00000476162 NHLH2Q02577 135 aa13.56□□□□□ -0.24
VARS2-207ENST00000476162 EIF5AL1Q6IS14 154 aaKnown RBP13.56□□□□□ -0.24
VARS2-207ENST00000476162 Q6P435 159 aa13.56□□□□□ -0.24
VARS2-207ENST00000476162 INO80CQ6PI98 192 aaPredicted RBP13.56□□□□□ -0.24
VARS2-207ENST00000476162 OR1J1Q8NGS3 322 aa13.56□□□□□ -0.24
VARS2-207ENST00000476162 LYPD6BQ8NI32 183 aa13.56□□□□□ -0.24
VARS2-207ENST00000476162 NKX2-6A6NCS4 301 aa13.55□□□□□ -0.24
VARS2-207ENST00000476162 ST8SIA3O43173 380 aa13.55□□□□□ -0.24
VARS2-207ENST00000476162 GAPDHP04406 335 aaKnown RBP13.55□□□□□ -0.24
VARS2-207ENST00000476162 SRPXP78539 464 aa13.55□□□□□ -0.24
VARS2-207ENST00000476162 PSG7Q13046 419 aa13.55□□□□□ -0.24
VARS2-207ENST00000476162 ZNF695Q8IW36 515 aa13.55□□□□□ -0.24
VARS2-207ENST00000476162 OR4D5Q8NGN0 318 aa13.55□□□□□ -0.24
VARS2-207ENST00000476162 TMEM56Q96MV1 263 aa13.55□□□□□ -0.24
VARS2-207ENST00000476162 TMEM56-RWDD3S4R434 201 aa13.55□□□□□ -0.24
VARS2-207ENST00000476162 CDIPTO14735 213 aa13.55□□□□□ -0.24
VARS2-207ENST00000476162 AGFG2O95081 481 aa13.55□□□□□ -0.24
VARS2-207ENST00000476162 OR8U9P0C7N5 309 aa13.55□□□□□ -0.24
VARS2-207ENST00000476162 RAC2P15153 192 aa13.55□□□□□ -0.24
VARS2-207ENST00000476162 RPS10P46783 165 aaKnown RBP13.55□□□□□ -0.24
VARS2-207ENST00000476162 ID4P47928 161 aa13.55□□□□□ -0.24
VARS2-207ENST00000476162 FOXF2Q12947 444 aa13.55□□□□□ -0.24
VARS2-207ENST00000476162 ZNF154Q13106 437 aa13.55□□□□□ -0.24
VARS2-207ENST00000476162 USF2Q15853 346 aaPredicted RBP13.55□□□□□ -0.24
VARS2-207ENST00000476162 ZNF880Q6PDB4 577 aa13.55□□□□□ -0.24
VARS2-207ENST00000476162 OR8U1Q8NH10 309 aa13.55□□□□□ -0.24
VARS2-207ENST00000476162 PLA2G2EQ9NZK7 142 aa13.55□□□□□ -0.24
VARS2-207ENST00000476162 RAB4AP20338 218 aa13.54□□□□□ -0.24
VARS2-207ENST00000476162 SPNS3Q6ZMD2 512 aa13.54□□□□□ -0.24
VARS2-207ENST00000476162 SELENOHQ8IZQ5 122 aaKnown RBP13.54□□□□□ -0.24
VARS2-207ENST00000476162 RAB24Q969Q5 203 aa13.54□□□□□ -0.24
VARS2-207ENST00000476162 SARAFQ96BY9 339 aa13.54□□□□□ -0.24
VARS2-207ENST00000476162 SCRT1Q9BWW7 348 aa13.54□□□□□ -0.24
VARS2-207ENST00000476162 RCL1Q9Y2P8 373 aaKnown RBP13.54□□□□□ -0.24
VARS2-207ENST00000476162 POLDIP2Q9Y2S7 368 aa13.54□□□□□ -0.24
VARS2-207ENST00000476162 TRAV39A0A0B4J263 110 aa13.54□□□□□ -0.24
VARS2-207ENST00000476162 MARCH11A6NNE9 402 aa13.54□□□□□ -0.24
VARS2-207ENST00000476162 A8MWP6 167 aa13.54□□□□□ -0.24
VARS2-207ENST00000476162 H0YL77 283 aa13.54□□□□□ -0.24
VARS2-207ENST00000476162 SIRPB1O00241 398 aa13.54□□□□□ -0.24
VARS2-207ENST00000476162 TNFSF12O43508 249 aa13.54□□□□□ -0.24
VARS2-207ENST00000476162 OR2H2O95918 312 aa13.54□□□□□ -0.24
VARS2-207ENST00000476162 SELEP16581 610 aa13.54□□□□□ -0.24
VARS2-207ENST00000476162 MPV17P39210 176 aa13.54□□□□□ -0.24
VARS2-207ENST00000476162 ERVK11-1P61568 191 aa13.54□□□□□ -0.24
VARS2-207ENST00000476162 HLA-DRB3P79483 266 aa13.54□□□□□ -0.24
VARS2-207ENST00000476162 TNFRSF9Q07011 255 aa13.54□□□□□ -0.24
VARS2-207ENST00000476162 HIST3H2BBQ8N257 126 aa13.54□□□□□ -0.24
VARS2-207ENST00000476162 OR10J5Q8NHC4 309 aa13.54□□□□□ -0.24
VARS2-207ENST00000476162 KLF14Q8TD94 323 aaPredicted RBP13.54□□□□□ -0.24
VARS2-207ENST00000476162 IQCF6A8MYZ5 107 aa13.53□□□□□ -0.24
VARS2-207ENST00000476162 GPR137BO60478 399 aa13.53□□□□□ -0.24
VARS2-207ENST00000476162 CNOT4O95628 575 aaKnown RBP13.53□□□□□ -0.24
VARS2-207ENST00000476162 CDS2O95674 445 aa13.53□□□□□ -0.24
VARS2-207ENST00000476162 GRPP07492 148 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms