RNA–Protein interactions for RNA: ENST00000476085.1

MSH5-SAPCD1-205, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

APPRIS ALT2 TSL 2

Gene MSH5-SAPCD1, Length 950 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-205ENST00000476085 GPR50Q13585 617 aa9.58□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 FHL3Q13643 280 aa9.58□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 MORN2Q502X0 79 aa9.58□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 GLIPR1L1Q6UWM5 242 aa9.58□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 LCNL1Q6ZST4 164 aa9.58□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 ODF3L1Q8IXM7 274 aa9.58□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 OR1L1Q8NH94 360 aa9.58□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 TFAP2CQ92754 450 aa9.58□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 TMEM80Q96HE8 168 aa9.58□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 Q96M66 194 aa9.58□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 DUX3Q96PT4 197 aa9.58□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 S100A13Q99584 98 aa9.58□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 GON7Q9BXV9 100 aa9.58□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 SCOCQ9UIL1 159 aa9.58□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 EFCAB10A6NFE3 127 aa9.57□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 NUDT19A8MXV4 375 aa9.57□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 MCRIP1C9JLW8 97 aa9.57□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 SPINT2O43291 252 aa9.57□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 RAMP3O60896 148 aa9.57□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 CD37P11049 281 aa9.57□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 IL3RAP26951 378 aa9.57□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 HSPA13P48723 471 aa9.57□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 DGCR2P98153 550 aa9.57□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 ST3GAL4Q11206 333 aa9.57□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 LY6G6FQ5SQ64 297 aa9.57□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 C6orf141Q5SZD1 244 aa9.57□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 RAB12Q6IQ22 244 aa9.57□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 ZNF554Q86TJ5 538 aa9.57□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 STX19Q8N4C7 294 aa9.57□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 ZFP41Q8N8Y5 198 aa9.57□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 OR4K15Q8NH41 348 aa9.57□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 FBLIM1Q8WUP2 373 aa9.57□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 DPF1Q92782 380 aa9.57□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 MUL1Q969V5 352 aa9.57□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 DERL3Q96Q80 235 aa9.57□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 OR14A2Q96R54 314 aa9.57□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 CHCHD6Q9BRQ6 235 aa9.57□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 ETAA1Q9NY74 926 aa9.57□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 CNOT2Q9NZN8 540 aaKnown RBP9.57□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 ZMAT5Q9UDW3 170 aaKnown RBP9.57□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 MRPS28Q9Y2Q9 187 aaKnown RBP9.57□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 GNAO1P09471 354 aa9.56□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 MGMTP16455 207 aa9.56□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 FUT3P21217 361 aa9.56□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 SOX6P35712 828 aa9.56□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 CD69Q07108 199 aa9.56□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 LSAMPQ13449 338 aa9.56□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 DCTN2Q13561 401 aaKnown RBP9.56□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 DEFB136Q30KP8 78 aa9.56□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 CXorf66Q5JRM2 361 aaPredicted RBP9.56□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 C6orf183Q5T699 404 aa9.56□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 TRAT1Q6PIZ9 186 aa9.56□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 UNQ9370/PRO34162Q6UXP9 181 aa9.56□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 C5orf24Q7Z6I8 188 aa9.56□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 OR8U1Q8NH10 309 aa9.56□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 NEK7Q8TDX7 302 aa9.56□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 C4orf3Q8WVX3 66 aa9.56□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 RITA1Q96K30 269 aa9.56□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 WWC2-AS2Q96NR7 200 aa9.56□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 RASL11BQ9BPW5 248 aa9.56□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 BANF2Q9H503 90 aa9.56□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 TAF9BQ9HBM6 251 aa9.56□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 RAB9BQ9NP90 201 aa9.56□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 PLCXD1Q9NUJ7 323 aa9.56□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 CKLFQ9UBR5 152 aa9.56□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 TRAPPC2LQ9UL33 140 aa9.56□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 PEX16Q9Y5Y5 336 aa9.56□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 A0A1W2PPK0 400 aa9.55□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 IGLV1-40P01703 118 aa9.55□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 HTD2P86397 168 aa9.55□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 RUNX1Q01196 453 aa9.55□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 NKAPLQ5M9Q1 402 aa9.55□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 JAGN1Q8N5M9 183 aa9.55□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 OR10V1Q8NGI7 309 aa9.55□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 MRPL30Q8TCC3 161 aaKnown RBP9.55□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 NRG4Q8WWG1 115 aa9.55□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 KCTD7Q96MP8 289 aa9.55□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 UQCC2Q9BRT2 126 aa9.55□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 SELENOIQ9C0D9 397 aa9.55□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 FKBP14Q9NWM8 211 aa9.55□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 GNG12Q9UBI6 72 aa9.55□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 I3L521 148 aa9.54□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 RRP9O43818 475 aaKnown RBP9.54□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 YPEL1O60688 119 aa9.54□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 PDCD6O75340 191 aa9.54□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 ATP6V1G2O95670 118 aa9.54□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 MAS1P04201 325 aa9.54□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 NHLRC4P0CG21 123 aaPredicted RBP9.54□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 LUMP51884 338 aaPredicted RBP9.54□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 AQP4P55087 323 aa9.54□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 TAS2R43P59537 309 aa9.54□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 GNMTQ14749 295 aa9.54□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 C19orf54Q5BKX5 351 aa9.54□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 C9orf66Q5T8R8 295 aa9.54□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 ASPHD1Q5U4P2 390 aa9.54□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 AWAT2Q6E213 333 aa9.54□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 ZNF833PQ6ZTB9 187 aa9.54□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 ZNF491Q8N8L2 437 aa9.54□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 NPBQ8NG41 125 aa9.54□□□□□ -0.88
MSH5-SAPCD1-205ENST00000476085 OR5M8Q8NGP6 311 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms