RNA–Protein interactions for RNA: ENST00000475873.2

USP4-209, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 536 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-209ENST00000475873 H2BFMP0C1H6 154 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 KITP10721 976 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 SPI1P17947 270 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 FMO3P31513 532 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 ZNF134P52741 427 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 CDC42P60953 191 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 RAB14P61106 215 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 S100A12P80511 92 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 CRMP1Q14194 572 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 UBE2V2Q15819 145 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 C12orf74Q32Q52 190 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 MOGAT2Q3SYC2 334 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 SPATS1Q496A3 300 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 AKIRIN2Q53H80 203 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 CLVS2Q5SYC1 327 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 LCN1P1Q5VSP4 162 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 CADM3Q8N126 398 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 FAM58AQ8N1B3 248 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 POC5Q8NA72 575 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 ZNF439Q8NDP4 499 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 BVESQ8NE79 360 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 NPBQ8NG41 125 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 OR51T1Q8NGJ9 327 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 OR6N2Q8NGY6 317 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 OR2T4Q8NH00 348 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 KCNG3Q8TAE7 436 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 PLPPR1Q8TBJ4 325 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 ENKURQ8TC29 256 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 MRGPRDQ8TDS7 321 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 RFKQ969G6 155 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 TPD52L3Q96J77 140 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 C7orf34Q96L11 122 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 TSC22D3Q99576 134 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 SRSF8Q9BRL6 282 aaKnown RBP3.43□□□□□ -1.86
USP4-209ENST00000475873 IFT27Q9BW83 186 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 TMEM120AQ9BXJ8 343 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 KRTAP1-5Q9BYS1 174 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 BARHL1Q9BZE3 327 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 SPACA1Q9HBV2 294 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 ADGRL4Q9HBW9 690 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 SPAG4Q9NPE6 437 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 ZNF355PQ9NSJ1 428 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 DCAF13Q9NV06 445 aaKnown RBP3.43□□□□□ -1.86
USP4-209ENST00000475873 CCDC167Q9P0B6 97 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 ZNF581Q9P0T4 197 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 GMPR2Q9P2T1 348 aaKnown RBP3.43□□□□□ -1.86
USP4-209ENST00000475873 PEMTQ9UBM1 199 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 CDH10Q9Y6N8 788 aa3.43□□□□□ -1.86
USP4-209ENST00000475873 DEFB131BA0A096LNP1 70 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 IGHV3-43A0A0B4J1X8 118 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 IGHV4-28A0A0C4DH34 117 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 FAM230AA0A1W2PPH8 454 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 TMEM120BA0PK00 339 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 ZNF320A2RRD8 509 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 LOC110117498-PIK3R3F6TDL0 507 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 C15orf65H3BRN8 121 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 CXCR6O00574 342 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 HSPB6O14558 160 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 AIREO43918 545 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 SNNO75324 88 aaPredicted RBP3.42□□□□□ -1.86
USP4-209ENST00000475873 CLN5O75503 358 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 DHRS3O75911 302 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 APOC1P02654 83 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 TTRP02766 147 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 CSTBP04080 98 aaKnown RBP3.42□□□□□ -1.86
USP4-209ENST00000475873 IGHV3-43DP0DP04 118 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 GALP22466 123 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 CBLN1P23435 193 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 TAGLN2P37802 199 aaKnown RBP3.42□□□□□ -1.86
USP4-209ENST00000475873 POLR2GP62487 172 aaKnown RBP eCLIP3.42□□□□□ -1.86
USP4-209ENST00000475873 RPP30P78346 268 aaKnown RBP3.42□□□□□ -1.86
USP4-209ENST00000475873 STX3Q13277 289 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 CDK5R1Q15078 307 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 WHAMMP3Q1A5X7 153 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 C2orf76Q3KRA6 126 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 FAM209BQ5JX69 171 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 RSBN1Q5VWQ0 802 aaPredicted RBP3.42□□□□□ -1.86
USP4-209ENST00000475873 SLC25A24Q6NUK1 477 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 WDR93Q6P2C0 686 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 FAHD1Q6P587 224 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 BTNL8Q6UX41 500 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 Q6ZSR3 168 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 SLC25A48Q6ZT89 311 aaKnown RBP3.42□□□□□ -1.86
USP4-209ENST00000475873 KCTD20Q7Z5Y7 419 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 C5orf24Q7Z6I8 188 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 NR2C2APQ86WQ0 139 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 ERI1Q8IV48 349 aaKnown RBP3.42□□□□□ -1.86
USP4-209ENST00000475873 UBE2DNLQ8IWF7 75 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 OR5T1Q8NG75 326 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 OR8D4Q8NGM9 314 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 OR6K6Q8NGW6 343 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 OR14K1Q8NGZ2 314 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 OR52J3Q8NH60 311 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 TEX47Q8TBZ9 253 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 ATP6V0BQ99437 205 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 CIB1Q99828 191 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 SPXQ9BT56 116 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 NDUFAF3Q9BU61 184 aa3.42□□□□□ -1.86
USP4-209ENST00000475873 MRPL20Q9BYC9 149 aaKnown RBP3.42□□□□□ -1.86
USP4-209ENST00000475873 PBOV1Q9GZY1 135 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms