RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 GPR132Q9UNW8 380 aa5.84□□□□□ -1.47
SHQ1-207ENST00000475558 GAB2Q9UQC2 676 aa5.84□□□□□ -1.47
SHQ1-207ENST00000475558 C14orf166Q9Y224 244 aaKnown RBP5.84□□□□□ -1.47
SHQ1-207ENST00000475558 MAB21L2Q9Y586 359 aa5.84□□□□□ -1.47
SHQ1-207ENST00000475558 ANK2Q01484 3957 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 TRBV6-7A0A0A0MS04 114 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 A0A0B4J2A0 478 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 TMEM82A0PJX8 343 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 ODAMA1E959 279 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 MEIS3P1A6NDR6 274 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 ZNF729A6NN14 1252 aaPredicted RBP5.83□□□□□ -1.48
SHQ1-207ENST00000475558 TMPRSS2O15393 492 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 PPIHO43447 177 aaKnown RBP5.83□□□□□ -1.48
SHQ1-207ENST00000475558 PSPNO60542 156 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 YPEL1O60688 119 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 PFDN1O60925 122 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 CTSDP07339 412 aaPredicted RBP5.83□□□□□ -1.48
SHQ1-207ENST00000475558 GSTT2P0CG29 244 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 ZNF728P0DKX0 622 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 FCGR2CP31995 323 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 GPR6P46095 362 aaPredicted RBP5.83□□□□□ -1.48
SHQ1-207ENST00000475558 OR3A1P47881 315 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 RAB7AP51149 207 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 LUMP51884 338 aaPredicted RBP5.83□□□□□ -1.48
SHQ1-207ENST00000475558 GMFBP60983 142 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 HLA-DRB3P79483 266 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 TNP2Q05952 138 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 AESQ08117 197 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 PDCD1Q15116 288 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 HMGN3Q15651 99 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 SCGB2B2Q4G0G5 96 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 ABCA11PQ4W5N1 156 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 C4orf46Q504U0 113 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 LCE3BQ5TA77 95 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 C1orf122Q6ZSJ8 110 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 SLC25A42Q86VD7 318 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 LHFPL1Q86WI0 220 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 SGPP2Q8IWX5 399 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 ZCCHC24Q8N2G6 241 aaKnown RBP5.83□□□□□ -1.48
SHQ1-207ENST00000475558 DEFB108BQ8NET1 73 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 OR4S1Q8NGB4 309 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 OR5T2Q8NGG2 359 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 OR8B3Q8NGG8 313 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 NEIL1Q96FI4 390 aaPredicted RBP5.83□□□□□ -1.48
SHQ1-207ENST00000475558 YPEL2Q96QA6 119 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 OR8B2Q96RD0 313 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 SLC6A7Q99884 636 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 CABLES2Q9BTV7 478 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 TINAGL1Q9GZM7 467 aaPredicted RBP5.83□□□□□ -1.48
SHQ1-207ENST00000475558 TAF9BQ9HBM6 251 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 TPSG1Q9NRR2 321 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 TMEM160Q9NX00 188 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 SLC25A10Q9UBX3 287 aaPredicted RBP5.83□□□□□ -1.48
SHQ1-207ENST00000475558 SHPKQ9UHJ6 478 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 ZNF230Q9UIE0 474 aaPredicted RBP5.83□□□□□ -1.48
SHQ1-207ENST00000475558 ELF5Q9UKW6 265 aaPredicted RBP5.83□□□□□ -1.48
SHQ1-207ENST00000475558 OR2W1Q9Y3N9 320 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 LINC00312Q9Y6C7 94 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 CADP27708 2225 aa5.83□□□□□ -1.48
SHQ1-207ENST00000475558 CUBNO60494 3623 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 IGHV3-64DA0A0J9YX35 117 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 KBTBD11-OT1A0A1B0GTJ5 212 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 HMX3A6NHT5 357 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 M0QYG6 137 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 F2RL2O00254 374 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 ADAM20O43506 726 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 CREBL2O60519 120 aaPredicted RBP5.82□□□□□ -1.48
SHQ1-207ENST00000475558 RP2O75695 350 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 TUSC2O75896 110 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 ATG12O94817 140 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 IGHV2-70P01814 119 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 GYPAP02724 150 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 RBP4P02753 201 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 RLN1P04808 185 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 WNT2P09544 360 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 PGAM2P15259 253 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 NDUFB7P17568 137 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 EGR1P18146 543 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 BTCP35070 178 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 CEACAM6P40199 344 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 EDDM3BP56851 147 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 RPL31P62899 125 aaKnown RBP5.82□□□□□ -1.48
SHQ1-207ENST00000475558 SRPXP78539 464 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 CYCSP99999 105 aaKnown RBP5.82□□□□□ -1.48
SHQ1-207ENST00000475558 DHODHQ02127 395 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 KRTAP24-1Q3LI83 254 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 LIN54Q6MZP7 749 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 GLDNQ6ZMI3 551 aaPredicted RBP5.82□□□□□ -1.48
SHQ1-207ENST00000475558 C8orf31Q8N9H6 132 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 ZNRF1Q8ND25 227 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 GCDHQ92947 438 aaPredicted RBP5.82□□□□□ -1.48
SHQ1-207ENST00000475558 ARL11Q969Q4 196 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 MOB3AQ96BX8 217 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 GAFA1Q96PS6 74 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 CCL13Q99616 98 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 TMEM246Q9BRR3 403 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 ZNF2Q9BSG1 426 aaPredicted RBP5.82□□□□□ -1.48
SHQ1-207ENST00000475558 BEX2Q9BXY8 128 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 C20orf85Q9H1P6 137 aa5.82□□□□□ -1.48
SHQ1-207ENST00000475558 MED28Q9H204 178 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms