RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 LPAR3Q9UBY5 353 aa11.4□□□□□ -0.58
TRAF4-210ENST00000475329 YLPM1P49750 1951 aaKnown RBP11.39□□□□□ -0.59
TRAF4-210ENST00000475329 ZNF462Q96JM2 2506 aa11.39□□□□□ -0.59
TRAF4-210ENST00000475329 GCN1Q92616 2671 aaKnown RBP11.39□□□□□ -0.59
TRAF4-210ENST00000475329 hADV38S2A0JD32 116 aa11.39□□□□□ -0.59
TRAF4-210ENST00000475329 HSD17B6O14756 317 aa11.39□□□□□ -0.59
TRAF4-210ENST00000475329 GNRHRP30968 328 aa11.39□□□□□ -0.59
TRAF4-210ENST00000475329 MEF2CQ06413 473 aaPredicted RBP11.39□□□□□ -0.59
TRAF4-210ENST00000475329 SRSF1Q07955 248 aaKnown RBP eCLIP11.39□□□□□ -0.591e-7■■■■□ 23.8
TRAF4-210ENST00000475329 GNMTQ14749 295 aa11.39□□□□□ -0.59
TRAF4-210ENST00000475329 C2orf68Q2NKX9 166 aa11.39□□□□□ -0.59
TRAF4-210ENST00000475329 C11orf91Q3C1V1 193 aa11.39□□□□□ -0.59
TRAF4-210ENST00000475329 LIN54Q6MZP7 749 aa11.39□□□□□ -0.59
TRAF4-210ENST00000475329 LYPD2Q6UXB3 125 aa11.39□□□□□ -0.59
TRAF4-210ENST00000475329 ZNF818PQ6ZRF7 136 aa11.39□□□□□ -0.59
TRAF4-210ENST00000475329 NLRC3Q7RTR2 1065 aa11.39□□□□□ -0.59
TRAF4-210ENST00000475329 CMTM1Q8IZ96 169 aa11.39□□□□□ -0.59
TRAF4-210ENST00000475329 OR52L2PQ8NGH6 319 aa11.39□□□□□ -0.59
TRAF4-210ENST00000475329 ASB13Q8WXK3 278 aa11.39□□□□□ -0.59
TRAF4-210ENST00000475329 TOLLIPQ9H0E2 274 aa11.39□□□□□ -0.59
TRAF4-210ENST00000475329 OR2S2Q9NQN1 319 aa11.39□□□□□ -0.59
TRAF4-210ENST00000475329 CCL28Q9NRJ3 127 aa11.39□□□□□ -0.59
TRAF4-210ENST00000475329 JPT1Q9UK76 154 aa11.39□□□□□ -0.59
TRAF4-210ENST00000475329 KCNS2Q9ULS6 477 aa11.39□□□□□ -0.59
TRAF4-210ENST00000475329 KCNIP3Q9Y2W7 256 aa11.39□□□□□ -0.59
TRAF4-210ENST00000475329 RBM7Q9Y580 266 aaKnown RBP11.39□□□□□ -0.59
TRAF4-210ENST00000475329 DOCK11Q5JSL3 2073 aa11.39□□□□□ -0.59
TRAF4-210ENST00000475329 MEX3AA1L020 520 aaKnown RBP11.38□□□□□ -0.59
TRAF4-210ENST00000475329 ZNF729A6NN14 1252 aaPredicted RBP11.38□□□□□ -0.59
TRAF4-210ENST00000475329 F2RL2O00254 374 aa11.38□□□□□ -0.59
TRAF4-210ENST00000475329 MPPED1O15442 326 aa11.38□□□□□ -0.59
TRAF4-210ENST00000475329 OR2A4O95047 310 aa11.38□□□□□ -0.59
TRAF4-210ENST00000475329 C1QBP02746 253 aa11.38□□□□□ -0.59
TRAF4-210ENST00000475329 CGB3P0DN86 165 aa11.38□□□□□ -0.59
TRAF4-210ENST00000475329 CGB7P0DN87 165 aa11.38□□□□□ -0.59
TRAF4-210ENST00000475329 CDKN1AP38936 164 aa11.38□□□□□ -0.59
TRAF4-210ENST00000475329 RAP2BP61225 183 aa11.38□□□□□ -0.59
TRAF4-210ENST00000475329 ANKRD55Q3KP44 614 aa11.38□□□□□ -0.59
TRAF4-210ENST00000475329 TMEM30BQ3MIR4 351 aa11.38□□□□□ -0.59
TRAF4-210ENST00000475329 KCTD9Q7L273 389 aa11.38□□□□□ -0.59
TRAF4-210ENST00000475329 FGFRL1Q8N441 504 aa11.38□□□□□ -0.59
TRAF4-210ENST00000475329 OR5M8Q8NGP6 311 aa11.38□□□□□ -0.59
TRAF4-210ENST00000475329 RFESDQ8TAC1 157 aa11.38□□□□□ -0.59
TRAF4-210ENST00000475329 CORO2AQ92828 525 aa11.38□□□□□ -0.59
TRAF4-210ENST00000475329 RAB1CQ92928 201 aa11.38□□□□□ -0.59
TRAF4-210ENST00000475329 GALNT14Q96FL9 552 aa11.38□□□□□ -0.59
TRAF4-210ENST00000475329 OR2A7Q96R45 310 aa11.38□□□□□ -0.59
TRAF4-210ENST00000475329 SUCNR1Q9BXA5 334 aa11.38□□□□□ -0.59
TRAF4-210ENST00000475329 CHIAQ9BZP6 476 aa11.38□□□□□ -0.59
TRAF4-210ENST00000475329 CHODLQ9H9P2 273 aa11.38□□□□□ -0.59
TRAF4-210ENST00000475329 CTSZQ9UBR2 303 aa11.38□□□□□ -0.59
TRAF4-210ENST00000475329 UBE2J1Q9Y385 318 aaPredicted RBP11.38□□□□□ -0.59
TRAF4-210ENST00000475329 LINC00312Q9Y6C7 94 aa11.38□□□□□ -0.59
TRAF4-210ENST00000475329 HELZ2Q9BYK8 2649 aaKnown RBP11.38□□□□□ -0.59
TRAF4-210ENST00000475329 IGHV3-43A0A0B4J1X8 118 aa11.37□□□□□ -0.59
TRAF4-210ENST00000475329 KBTBD11-OT1A0A1B0GTJ5 212 aa11.37□□□□□ -0.59
TRAF4-210ENST00000475329 DBX1A6NMT0 343 aa11.37□□□□□ -0.59
TRAF4-210ENST00000475329 DVL1O14640 695 aa11.37□□□□□ -0.59
TRAF4-210ENST00000475329 PPIHO43447 177 aaKnown RBP11.37□□□□□ -0.59
TRAF4-210ENST00000475329 LY6HO94772 140 aa11.37□□□□□ -0.59
TRAF4-210ENST00000475329 SIX6O95475 246 aa11.37□□□□□ -0.59
TRAF4-210ENST00000475329 IGHV3-43DP0DP04 118 aa11.37□□□□□ -0.59
TRAF4-210ENST00000475329 COX6B1P14854 86 aa11.37□□□□□ -0.59
TRAF4-210ENST00000475329 HLA-GP17693 338 aa11.37□□□□□ -0.59
TRAF4-210ENST00000475329 PPP1CCP36873 323 aaKnown RBP11.37□□□□□ -0.59
TRAF4-210ENST00000475329 RPL31P62899 125 aaKnown RBP11.37□□□□□ -0.59
TRAF4-210ENST00000475329 LTC4SQ16873 150 aa11.37□□□□□ -0.59
TRAF4-210ENST00000475329 AVPI1Q5T686 147 aa11.37□□□□□ -0.59
TRAF4-210ENST00000475329 TCF23Q7RTU1 214 aa11.37□□□□□ -0.59
TRAF4-210ENST00000475329 TBC1D26Q86UD7 250 aa11.37□□□□□ -0.59
TRAF4-210ENST00000475329 LDLRAD3Q86YD5 345 aa11.37□□□□□ -0.59
TRAF4-210ENST00000475329 BVESQ8NE79 360 aa11.37□□□□□ -0.59
TRAF4-210ENST00000475329 FAM216AQ8WUB2 273 aa11.37□□□□□ -0.59
TRAF4-210ENST00000475329 H1FXQ92522 213 aaKnown RBP11.37□□□□□ -0.59
TRAF4-210ENST00000475329 AKR1E2Q96JD6 320 aa11.37□□□□□ -0.59
TRAF4-210ENST00000475329 PARP12Q9H0J9 701 aaKnown RBP11.37□□□□□ -0.59
TRAF4-210ENST00000475329 GAL3ST2Q9H3Q3 398 aa11.37□□□□□ -0.59
TRAF4-210ENST00000475329 RAB18Q9NP72 206 aa11.37□□□□□ -0.59
TRAF4-210ENST00000475329 TAS2R3Q9NYW6 316 aa11.37□□□□□ -0.59
TRAF4-210ENST00000475329 PRR13Q9NZ81 148 aa11.37□□□□□ -0.59
TRAF4-210ENST00000475329 GNG12Q9UBI6 72 aa11.37□□□□□ -0.59
TRAF4-210ENST00000475329 CLN8Q9UBY8 286 aa11.37□□□□□ -0.59
TRAF4-210ENST00000475329 C3orf85A0A1B0GTC6 90 aa11.36□□□□□ -0.59
TRAF4-210ENST00000475329 SMLR1H3BR10 107 aa11.36□□□□□ -0.59
TRAF4-210ENST00000475329 CCSO14618 274 aa11.36□□□□□ -0.59
TRAF4-210ENST00000475329 FCN3O75636 299 aa11.36□□□□□ -0.59
TRAF4-210ENST00000475329 RGS11O94810 467 aa11.36□□□□□ -0.59
TRAF4-210ENST00000475329 F12P00748 615 aaPredicted RBP11.36□□□□□ -0.59
TRAF4-210ENST00000475329 OR5AC1P0C628 307 aa11.36□□□□□ -0.59
TRAF4-210ENST00000475329 OR8U9P0C7N5 309 aa11.36□□□□□ -0.59
TRAF4-210ENST00000475329 EFNA4P52798 201 aa11.36□□□□□ -0.59
TRAF4-210ENST00000475329 H2BFSP57053 126 aa11.36□□□□□ -0.59
TRAF4-210ENST00000475329 SRPXP78539 464 aa11.36□□□□□ -0.59
TRAF4-210ENST00000475329 TMEM187Q14656 261 aa11.36□□□□□ -0.59
TRAF4-210ENST00000475329 MSMO1Q15800 293 aa11.36□□□□□ -0.59
TRAF4-210ENST00000475329 C17orf58Q2M2W7 97 aa11.36□□□□□ -0.59
TRAF4-210ENST00000475329 TMEM155Q4W5P6 130 aa11.36□□□□□ -0.59
TRAF4-210ENST00000475329 LY6G6FQ5SQ64 297 aa11.36□□□□□ -0.59
TRAF4-210ENST00000475329 DCAF12L2Q5VW00 463 aa11.36□□□□□ -0.59
TRAF4-210ENST00000475329 NOXA1Q86UR1 476 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms