RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 IGKV1D-17A0A075B6S4 117 aa8.21□□□□□ -1.1
USP39-214ENST00000474572 ATP6V1G2-DDX39BF2Z307 99 aa8.21□□□□□ -1.1
USP39-214ENST00000474572 C15orf65H3BRN8 121 aa8.21□□□□□ -1.1
USP39-214ENST00000474572 LGALS8O00214 317 aa8.21□□□□□ -1.1
USP39-214ENST00000474572 TNFSF12O43508 249 aa8.21□□□□□ -1.1
USP39-214ENST00000474572 HBZP02008 142 aa8.21□□□□□ -1.1
USP39-214ENST00000474572 ADH4P08319 380 aa8.21□□□□□ -1.1
USP39-214ENST00000474572 SPP1P10451 314 aa8.21□□□□□ -1.1
USP39-214ENST00000474572 PVALBP20472 110 aaPredicted RBP8.21□□□□□ -1.1
USP39-214ENST00000474572 CD40P25942 277 aa8.21□□□□□ -1.1
USP39-214ENST00000474572 PRDX2P32119 198 aa8.21□□□□□ -1.1
USP39-214ENST00000474572 CEACAM6P40199 344 aa8.21□□□□□ -1.1
USP39-214ENST00000474572 POLR2GP62487 172 aaKnown RBP eCLIP8.21□□□□□ -1.1
USP39-214ENST00000474572 HTD2P86397 168 aa8.21□□□□□ -1.1
USP39-214ENST00000474572 HOXA4Q00056 320 aaPredicted RBP8.21□□□□□ -1.1
USP39-214ENST00000474572 AESQ08117 197 aa8.21□□□□□ -1.1
USP39-214ENST00000474572 TUSC1Q2TAM9 212 aa8.21□□□□□ -1.1
USP39-214ENST00000474572 C22orf34Q6ZV56 151 aa8.21□□□□□ -1.1
USP39-214ENST00000474572 CISD2Q8N5K1 135 aaKnown RBP8.21□□□□□ -1.1
USP39-214ENST00000474572 TMEM252Q8N6L7 170 aa8.21□□□□□ -1.1
USP39-214ENST00000474572 TCTEX1D1Q8N7M0 179 aa8.21□□□□□ -1.1
USP39-214ENST00000474572 GALNT11Q8NCW6 608 aa8.21□□□□□ -1.1
USP39-214ENST00000474572 ARL11Q969Q4 196 aa8.21□□□□□ -1.1
USP39-214ENST00000474572 GALMQ96C23 342 aa8.21□□□□□ -1.1
USP39-214ENST00000474572 C5orf30Q96GV9 206 aa8.21□□□□□ -1.1
USP39-214ENST00000474572 SNX22Q96L94 193 aa8.21□□□□□ -1.1
USP39-214ENST00000474572 OR2V2Q96R30 315 aa8.21□□□□□ -1.1
USP39-214ENST00000474572 MRPL37Q9BZE1 423 aaKnown RBP8.21□□□□□ -1.1
USP39-214ENST00000474572 PLEKHF2Q9H8W4 249 aa8.21□□□□□ -1.1
USP39-214ENST00000474572 ZC4H2Q9NQZ6 224 aa8.21□□□□□ -1.1
USP39-214ENST00000474572 ASF1BQ9NVP2 202 aa8.21□□□□□ -1.1
USP39-214ENST00000474572 TAS2R3Q9NYW6 316 aa8.21□□□□□ -1.1
USP39-214ENST00000474572 BORCS7-ASMTA0A0B4J1R7 106 aa8.2□□□□□ -1.1
USP39-214ENST00000474572 IGSF23A1L1A6 192 aa8.2□□□□□ -1.1
USP39-214ENST00000474572 RNF212BA8MTL3 300 aa8.2□□□□□ -1.1
USP39-214ENST00000474572 TEX46H3BTG2 121 aa8.2□□□□□ -1.1
USP39-214ENST00000474572 HSPA12AO43301 675 aa8.2□□□□□ -1.1
USP39-214ENST00000474572 IGKV1-5P01602 117 aa8.2□□□□□ -1.1
USP39-214ENST00000474572 SERPINE2P07093 398 aa8.2□□□□□ -1.1
USP39-214ENST00000474572 OR8U9P0C7N5 309 aa8.2□□□□□ -1.1
USP39-214ENST00000474572 P0C879 139 aa8.2□□□□□ -1.1
USP39-214ENST00000474572 BMP5P22003 454 aa8.2□□□□□ -1.1
USP39-214ENST00000474572 IL2RGP31785 369 aa8.2□□□□□ -1.1
USP39-214ENST00000474572 GABRA2P47869 451 aa8.2□□□□□ -1.1
USP39-214ENST00000474572 GLIPR1P48060 266 aa8.2□□□□□ -1.1
USP39-214ENST00000474572 PAX9P55771 341 aa8.2□□□□□ -1.1
USP39-214ENST00000474572 BLOC1S1P78537 153 aa8.2□□□□□ -1.1
USP39-214ENST00000474572 NHLH1Q02575 133 aa8.2□□□□□ -1.1
USP39-214ENST00000474572 BAXQ07812 192 aa8.2□□□□□ -1.1
USP39-214ENST00000474572 PJVKQ0ZLH3 352 aa8.2□□□□□ -1.1
USP39-214ENST00000474572 SPRNQ5BIV9 151 aa8.2□□□□□ -1.1
USP39-214ENST00000474572 CXorf66Q5JRM2 361 aaPredicted RBP8.2□□□□□ -1.1
USP39-214ENST00000474572 KRBOX4Q5JUW0 171 aa8.2□□□□□ -1.1
USP39-214ENST00000474572 BTNL8Q6UX41 500 aa8.2□□□□□ -1.1
USP39-214ENST00000474572 GFRALQ6UXV0 394 aa8.2□□□□□ -1.1
USP39-214ENST00000474572 ZNF295-AS1Q8N0V1 137 aa8.2□□□□□ -1.1
USP39-214ENST00000474572 OR13A1Q8NGR1 328 aa8.2□□□□□ -1.1
USP39-214ENST00000474572 OR8U1Q8NH10 309 aa8.2□□□□□ -1.1
USP39-214ENST00000474572 OR51H1Q8NH63 302 aa8.2□□□□□ -1.1
USP39-214ENST00000474572 PPP1R35Q8TAP8 253 aa8.2□□□□□ -1.1
USP39-214ENST00000474572 Q8TCH9 128 aa8.2□□□□□ -1.1
USP39-214ENST00000474572 ITLN1Q8WWA0 313 aa8.2□□□□□ -1.1
USP39-214ENST00000474572 SNRNP40Q96DI7 357 aaKnown RBP8.2□□□□□ -1.1
USP39-214ENST00000474572 SLC25A31Q9H0C2 315 aa8.2□□□□□ -1.1
USP39-214ENST00000474572 PARP11Q9NR21 331 aa8.2□□□□□ -1.1
USP39-214ENST00000474572 COA4Q9NYJ1 87 aa8.2□□□□□ -1.1
USP39-214ENST00000474572 IL19Q9UHD0 177 aa8.2□□□□□ -1.1
USP39-214ENST00000474572 DUSP13Q9UII6 198 aa8.2□□□□□ -1.1
USP39-214ENST00000474572 CNOT1A5YKK6 2376 aaKnown RBP8.19□□□□□ -1.1
USP39-214ENST00000474572 FAM24AA6NFZ4 105 aa8.19□□□□□ -1.1
USP39-214ENST00000474572 ZNF705EA8MWA4 302 aaPredicted RBP8.19□□□□□ -1.1
USP39-214ENST00000474572 FAM90A26D6RGX4 464 aa8.19□□□□□ -1.1
USP39-214ENST00000474572 C16orf97H3BN30 126 aa8.19□□□□□ -1.1
USP39-214ENST00000474572 MGST3O14880 152 aa8.19□□□□□ -1.1
USP39-214ENST00000474572 TMEM50AO95807 157 aa8.19□□□□□ -1.1
USP39-214ENST00000474572 IGHV1-46P01743 117 aa8.19□□□□□ -1.1
USP39-214ENST00000474572 TFF1P04155 84 aa8.19□□□□□ -1.1
USP39-214ENST00000474572 THBDP07204 575 aa8.19□□□□□ -1.1
USP39-214ENST00000474572 CD55P08174 381 aa8.19□□□□□ -1.1
USP39-214ENST00000474572 CGB3P0DN86 165 aa8.19□□□□□ -1.1
USP39-214ENST00000474572 CGB7P0DN87 165 aa8.19□□□□□ -1.1
USP39-214ENST00000474572 PTAFRP25105 342 aa8.19□□□□□ -1.1
USP39-214ENST00000474572 LPAR6P43657 344 aa8.19□□□□□ -1.1
USP39-214ENST00000474572 NHLH2Q02577 135 aa8.19□□□□□ -1.1
USP39-214ENST00000474572 C10orf91Q5T1B1 145 aa8.19□□□□□ -1.1
USP39-214ENST00000474572 PXDC1Q5TGL8 231 aa8.19□□□□□ -1.1
USP39-214ENST00000474572 TMEM108Q6UXF1 575 aa8.19□□□□□ -1.1
USP39-214ENST00000474572 PRR18Q8N4B5 295 aa8.19□□□□□ -1.1
USP39-214ENST00000474572 BPIFCQ8NFQ6 507 aa8.19□□□□□ -1.1
USP39-214ENST00000474572 OR52L2PQ8NGH6 319 aa8.19□□□□□ -1.1
USP39-214ENST00000474572 UBALD1Q8TB05 177 aa8.19□□□□□ -1.1
USP39-214ENST00000474572 MRGPRDQ8TDS7 321 aa8.19□□□□□ -1.1
USP39-214ENST00000474572 TSNAXQ99598 290 aaKnown RBP8.19□□□□□ -1.1
USP39-214ENST00000474572 SMIM3Q9BZL3 60 aa8.19□□□□□ -1.1
USP39-214ENST00000474572 HEATR1Q9H583 2144 aaKnown RBP8.19□□□□□ -1.1
USP39-214ENST00000474572 JPT1Q9UK76 154 aa8.19□□□□□ -1.1
USP39-214ENST00000474572 KCNS2Q9ULS6 477 aa8.19□□□□□ -1.1
USP39-214ENST00000474572 PPP1R3CQ9UQK1 317 aa8.19□□□□□ -1.1
USP39-214ENST00000474572 DMXL1Q9Y485 3027 aa8.18□□□□□ -1.1
USP39-214ENST00000474572 ODAMA1E959 279 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms