RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.97□□□□□ -1.77
CCNL1-215ENST00000474539 I3L521 148 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 HYPMO75409 117 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 GYPAP02724 150 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 WNT2P09544 360 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 RIGQ13278 110 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 ZNF146Q15072 292 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 ECSCRQ19T08 205 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 TMEM78Q5T7P6 136 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 LYRM7Q5U5X0 104 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 HOGA1Q86XE5 327 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 OR13A1Q8NGR1 328 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 FRZBQ92765 325 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 CCL13Q99616 98 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 SRSF8Q9BRL6 282 aaKnown RBP3.97□□□□□ -1.77
CCNL1-215ENST00000474539 C1QTNF5Q9BXJ0 243 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 MRPL32Q9BYC8 188 aaKnown RBP3.97□□□□□ -1.77
CCNL1-215ENST00000474539 TOLLIPQ9H0E2 274 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 AK3Q9UIJ7 227 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 FZR1Q9UM11 496 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 EP400Q96L91 3159 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 A1L4Q6 167 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 H0Y980 276 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 J3QR06 171 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 M0QYG6 137 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 LMX1BO60663 402 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 IGHV3-13P01766 116 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 OR4E1P0C645 316 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 CECR9P0C854 216 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 PAX1P15863 534 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 NPPCP23582 126 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 CLDN12P56749 244 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 HERVK_113P61574 105 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 LY6DQ14210 128 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 SPCS2Q15005 226 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 TMED6Q8WW62 240 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 MARVELD3Q96A59 401 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 DUX5Q96PT3 197 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 GGACTQ9BVM4 153 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 PRR14Q9BWN1 585 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 SAMD10Q9BYL1 202 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 TMEFF2Q9UIK5 374 aaPredicted RBP3.97□□□□□ -1.77
CCNL1-215ENST00000474539 CDC42EP3Q9UKI2 254 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 OR51B2Q9Y5P1 312 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 ARID2Q68CP9 1835 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 ELOA3CA0A087WX78 387 aaPredicted RBP3.97□□□□□ -1.77
CCNL1-215ENST00000474539 TMEM272A0A1B0GTI8 110 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 LINC01549A6NIU2 74 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 OR4C45A6NMZ5 311 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 SYNGR2O43760 224 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 SSSCA1O60232 199 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 HLA-GP17693 338 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 PAX5Q02548 391 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 C10orf113Q5VZT2 155 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 ZNF787Q6DD87 383 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 BPIFA4PQ86YQ2 179 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 CADM3Q8N126 398 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 OR52I2Q8NH67 350 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 OR5P3Q8WZ94 311 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 GALNT14Q96FL9 552 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 OR5M11Q96RB7 305 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 PLA2G12AQ9BZM1 189 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 MOB4Q9Y3A3 225 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 GOLT1BQ9Y3E0 138 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 SIPA1L1O43166 1804 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 TANC1Q9C0D5 1861 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 A6NNC1 897 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 FAM90A9PA6NNJ1 464 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 GEMIN2O14893 280 aaKnown RBP3.97□□□□□ -1.77
CCNL1-215ENST00000474539 PRSS23O95084 383 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 PPYP01298 95 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 SLC25A5P05141 298 aaKnown RBP3.97□□□□□ -1.77
CCNL1-215ENST00000474539 RAB5AP20339 215 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 ANOS1P23352 680 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 SUCLG1P53597 346 aaKnown RBP3.97□□□□□ -1.77
CCNL1-215ENST00000474539 LYZP61626 148 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 ZNF674Q2M3X9 581 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 TMEM41BQ5BJD5 291 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 VAX1Q5SQQ9 334 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 NCMAPQ5T1S8 102 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 HIST2H3PS2Q5TEC6 136 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 TEPPQ6URK8 271 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 HAPLN4Q86UW8 402 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 DTD1Q8TEA8 209 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 ARHGAP5-AS1Q96IT6 56 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 CITED4Q96RK1 184 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 WNT5BQ9H1J7 359 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 SMDT1Q9H4I9 107 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 NCOR1P1Q9H4R4 102 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 NRN1Q9NPD7 142 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 C20orf141Q9NUB4 165 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 MMP24Q9Y5R2 645 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 URGCP-MRPS24S4R325 110 aa3.97□□□□□ -1.77
CCNL1-215ENST00000474539 IGLV1-36A0A0B4J1U3 117 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 A8MV72 311 aaPredicted RBP3.96□□□□□ -1.78
CCNL1-215ENST00000474539 NPIPB9F8W1W9 429 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 ZFPL1O95159 310 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 RELBQ01201 579 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 MGAT2Q10469 447 aa3.96□□□□□ -1.78
CCNL1-215ENST00000474539 TM4SF20Q53R12 229 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms