RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 WNT16Q9UBV4 365 aa15.9■□□□□ 0.14
ECHDC1-214ENST00000474289 LCN2P80188 198 aa15.9■□□□□ 0.14
ECHDC1-214ENST00000474289 HYAL1Q12794 435 aa15.9■□□□□ 0.14
ECHDC1-214ENST00000474289 DEFB133Q30KQ1 61 aa15.9■□□□□ 0.14
ECHDC1-214ENST00000474289 KCNIP4Q6PIL6 250 aa15.9■□□□□ 0.14
ECHDC1-214ENST00000474289 TOMM20LQ6UXN7 152 aa15.9■□□□□ 0.14
ECHDC1-214ENST00000474289 Q6ZS49 121 aa15.9■□□□□ 0.14
ECHDC1-214ENST00000474289 ZNF837Q96EG3 531 aaPredicted RBP15.9■□□□□ 0.14
ECHDC1-214ENST00000474289 PARD6AQ9NPB6 346 aa15.9■□□□□ 0.14
ECHDC1-214ENST00000474289 PSENENQ9NZ42 101 aa15.9■□□□□ 0.14
ECHDC1-214ENST00000474289 TRAPPC1Q9Y5R8 145 aa15.9■□□□□ 0.14
ECHDC1-214ENST00000474289 UNC13CQ8NB66 2214 aa15.9■□□□□ 0.14
ECHDC1-214ENST00000474289 DHHO43323 396 aa15.89■□□□□ 0.13
ECHDC1-214ENST00000474289 YPEL1O60688 119 aa15.89■□□□□ 0.13
ECHDC1-214ENST00000474289 F2RP25116 425 aa15.89■□□□□ 0.13
ECHDC1-214ENST00000474289 FAM78BQ5VT40 261 aa15.89■□□□□ 0.13
ECHDC1-214ENST00000474289 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.89■□□□□ 0.13
ECHDC1-214ENST00000474289 OR10G3Q8NGC4 313 aa15.89■□□□□ 0.13
ECHDC1-214ENST00000474289 TMEM54Q969K7 222 aa15.89■□□□□ 0.13
ECHDC1-214ENST00000474289 YPEL2Q96QA6 119 aa15.89■□□□□ 0.13
ECHDC1-214ENST00000474289 OR4C12Q96R67 309 aa15.89■□□□□ 0.13
ECHDC1-214ENST00000474289 METTL7AQ9H8H3 244 aa15.89■□□□□ 0.13
ECHDC1-214ENST00000474289 GPR35Q9HC97 309 aa15.89■□□□□ 0.13
ECHDC1-214ENST00000474289 DOCK11Q5JSL3 2073 aa15.89■□□□□ 0.13
ECHDC1-214ENST00000474289 SYNGR2O43760 224 aa15.89■□□□□ 0.13
ECHDC1-214ENST00000474289 IL6RP08887 468 aaPredicted RBP15.89■□□□□ 0.13
ECHDC1-214ENST00000474289 EDN3P14138 238 aa15.89■□□□□ 0.13
ECHDC1-214ENST00000474289 CHRNA7P36544 502 aa15.89■□□□□ 0.13
ECHDC1-214ENST00000474289 CCR5P51681 352 aa15.89■□□□□ 0.13
ECHDC1-214ENST00000474289 HBG1P69891 147 aa15.89■□□□□ 0.13
ECHDC1-214ENST00000474289 HBG2P69892 147 aa15.89■□□□□ 0.13
ECHDC1-214ENST00000474289 BATFQ16520 125 aa15.89■□□□□ 0.13
ECHDC1-214ENST00000474289 CARFQ8N187 725 aa15.89■□□□□ 0.13
ECHDC1-214ENST00000474289 OR5T1Q8NG75 326 aa15.89■□□□□ 0.13
ECHDC1-214ENST00000474289 CD207Q9UJ71 328 aa15.89■□□□□ 0.13
ECHDC1-214ENST00000474289 MMP17Q9ULZ9 603 aa15.89■□□□□ 0.13
ECHDC1-214ENST00000474289 ZNF407Q9C0G0 2248 aa15.89■□□□□ 0.13
ECHDC1-214ENST00000474289 IGKV1-6A0A0C4DH72 117 aa15.88■□□□□ 0.13
ECHDC1-214ENST00000474289 TNFSF13O75888 250 aa15.88■□□□□ 0.13
ECHDC1-214ENST00000474289 OR5I1Q13606 314 aa15.88■□□□□ 0.13
ECHDC1-214ENST00000474289 C7orf61Q8IZ16 206 aa15.88■□□□□ 0.13
ECHDC1-214ENST00000474289 OR51H1Q8NH63 302 aa15.88■□□□□ 0.13
ECHDC1-214ENST00000474289 TAF15Q92804 592 aaKnown RBP eCLIP15.88■□□□□ 0.13
ECHDC1-214ENST00000474289 OR2J1Q9GZK6 312 aa15.88■□□□□ 0.13
ECHDC1-214ENST00000474289 SLC25A22Q9H936 323 aa15.88■□□□□ 0.13
ECHDC1-214ENST00000474289 TMEM106BQ9NUM4 274 aa15.88■□□□□ 0.13
ECHDC1-214ENST00000474289 CACNG5Q9UF02 275 aa15.88■□□□□ 0.13
ECHDC1-214ENST00000474289 UBE2L5PA0A1B0GUS4 154 aa15.88■□□□□ 0.13
ECHDC1-214ENST00000474289 A0A1W2PPC4 97 aa15.88■□□□□ 0.13
ECHDC1-214ENST00000474289 PSG2P11465 335 aa15.88■□□□□ 0.13
ECHDC1-214ENST00000474289 SLC25A6P12236 298 aa15.88■□□□□ 0.13
ECHDC1-214ENST00000474289 ARL4DP49703 201 aa15.88■□□□□ 0.13
ECHDC1-214ENST00000474289 TEX43Q6ZNM6 134 aa15.88■□□□□ 0.13
ECHDC1-214ENST00000474289 NFAM1Q8NET5 270 aaPredicted RBP15.88■□□□□ 0.13
ECHDC1-214ENST00000474289 OR2M3Q8NG83 312 aa15.88■□□□□ 0.13
ECHDC1-214ENST00000474289 PXMP4Q9Y6I8 212 aa15.88■□□□□ 0.13
ECHDC1-214ENST00000474289 IGLV3-32A0A0A0MS00 114 aa15.87■□□□□ 0.13
ECHDC1-214ENST00000474289 IGHV3-15A0A0B4J1V0 119 aa15.87■□□□□ 0.13
ECHDC1-214ENST00000474289 TRBV11-1A0A0K0K1C0 115 aa15.87■□□□□ 0.13
ECHDC1-214ENST00000474289 A0A0U1RQK1 487 aa15.87■□□□□ 0.13
ECHDC1-214ENST00000474289 A0A1B0GX78 115 aa15.87■□□□□ 0.13
ECHDC1-214ENST00000474289 ZNF320A2RRD8 509 aa15.87■□□□□ 0.13
ECHDC1-214ENST00000474289 NAPSAO96009 420 aa15.87■□□□□ 0.13
ECHDC1-214ENST00000474289 PDGFBP01127 241 aaPredicted RBP15.87■□□□□ 0.13
ECHDC1-214ENST00000474289 FUT6P51993 359 aa15.87■□□□□ 0.13
ECHDC1-214ENST00000474289 TPTE2P1Q5T6R2 138 aa15.87■□□□□ 0.13
ECHDC1-214ENST00000474289 PLCXD3Q63HM9 321 aa15.87■□□□□ 0.13
ECHDC1-214ENST00000474289 Q6ZS52 159 aa15.87■□□□□ 0.13
ECHDC1-214ENST00000474289 Q6ZWC4 215 aa15.87■□□□□ 0.13
ECHDC1-214ENST00000474289 ZNF611Q8N823 705 aa15.87■□□□□ 0.13
ECHDC1-214ENST00000474289 MANBALQ9NQG1 85 aa15.87■□□□□ 0.13
ECHDC1-214ENST00000474289 SERPINE2P07093 398 aa15.87■□□□□ 0.13
ECHDC1-214ENST00000474289 OR1K1Q8NGR3 316 aa15.87■□□□□ 0.13
ECHDC1-214ENST00000474289 WDYHV1Q96HA8 205 aa15.87■□□□□ 0.13
ECHDC1-214ENST00000474289 PAM16Q9Y3D7 125 aa15.87■□□□□ 0.13
ECHDC1-214ENST00000474289 SYNGR3O43761 229 aa15.86■□□□□ 0.13
ECHDC1-214ENST00000474289 VENTXO95231 258 aa15.86■□□□□ 0.13
ECHDC1-214ENST00000474289 UMODP07911 640 aa15.86■□□□□ 0.13
ECHDC1-214ENST00000474289 UBE2NP61088 152 aaKnown RBP15.86■□□□□ 0.13
ECHDC1-214ENST00000474289 FAM69BQ5VUD6 431 aa15.86■□□□□ 0.13
ECHDC1-214ENST00000474289 ACSM6Q6P461 480 aa15.86■□□□□ 0.13
ECHDC1-214ENST00000474289 TMEM144Q7Z5S9 345 aa15.86■□□□□ 0.13
ECHDC1-214ENST00000474289 OR10V1Q8NGI7 309 aa15.86■□□□□ 0.13
ECHDC1-214ENST00000474289 MTIF3Q9H2K0 278 aaKnown RBP15.86■□□□□ 0.13
ECHDC1-214ENST00000474289 ASCL3Q9NQ33 180 aa15.86■□□□□ 0.13
ECHDC1-214ENST00000474289 CD82P27701 267 aa15.86■□□□□ 0.13
ECHDC1-214ENST00000474289 TFPI2P48307 235 aa15.86■□□□□ 0.13
ECHDC1-214ENST00000474289 GNG10P50151 68 aa15.86■□□□□ 0.13
ECHDC1-214ENST00000474289 OR1D5P58170 312 aa15.86■□□□□ 0.13
ECHDC1-214ENST00000474289 TRA2AQ13595 282 aaKnown RBP eCLIP15.86■□□□□ 0.13
ECHDC1-214ENST00000474289 CMTM2Q8TAZ6 248 aa15.86■□□□□ 0.13
ECHDC1-214ENST00000474289 UBE2ZQ9H832 354 aaPredicted RBP15.86■□□□□ 0.13
ECHDC1-214ENST00000474289 PRUNE2Q8WUY3 3088 aa15.85■□□□□ 0.13
ECHDC1-214ENST00000474289 C1QTNF9BB2RNN3 333 aa15.85■□□□□ 0.13
ECHDC1-214ENST00000474289 HSPB6O14558 160 aa15.85■□□□□ 0.13
ECHDC1-214ENST00000474289 SIAH2O43255 324 aa15.85■□□□□ 0.13
ECHDC1-214ENST00000474289 PPP1CBP62140 327 aa15.85■□□□□ 0.13
ECHDC1-214ENST00000474289 RHBDD2Q6NTF9 364 aa15.85■□□□□ 0.13
ECHDC1-214ENST00000474289 PIGCQ92535 297 aa15.85■□□□□ 0.13
ECHDC1-214ENST00000474289 HLA-CQ95604 372 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms