RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 SLC25A48Q6ZT89 311 aaKnown RBP14.26□□□□□ -0.13
UPF3A-203ENST00000474056 C6orf201Q7Z4U5 140 aa14.26□□□□□ -0.13
UPF3A-203ENST00000474056 MOB3BQ86TA1 216 aa14.26□□□□□ -0.13
UPF3A-203ENST00000474056 NDUFA11Q86Y39 141 aa14.26□□□□□ -0.13
UPF3A-203ENST00000474056 OR5AU1Q8NGC0 362 aa14.26□□□□□ -0.13
UPF3A-203ENST00000474056 ST6GALNAC6Q969X2 333 aa14.26□□□□□ -0.13
UPF3A-203ENST00000474056 RAB9BQ9NP90 201 aa14.26□□□□□ -0.13
UPF3A-203ENST00000474056 BLOC1S6Q9UL45 172 aa14.26□□□□□ -0.13
UPF3A-203ENST00000474056 NOTCH3Q9UM47 2321 aa14.26□□□□□ -0.13
UPF3A-203ENST00000474056 ARL6IP5O75915 188 aa14.25□□□□□ -0.13
UPF3A-203ENST00000474056 CALRP27797 417 aaKnown RBP14.25□□□□□ -0.13
UPF3A-203ENST00000474056 P2RY14Q15391 338 aa14.25□□□□□ -0.13
UPF3A-203ENST00000474056 SSX1Q16384 188 aa14.25□□□□□ -0.13
UPF3A-203ENST00000474056 TMEM30BQ3MIR4 351 aa14.25□□□□□ -0.13
UPF3A-203ENST00000474056 CT45A1Q5HYN5 189 aa14.25□□□□□ -0.13
UPF3A-203ENST00000474056 C10orf99Q6UWK7 81 aa14.25□□□□□ -0.13
UPF3A-203ENST00000474056 ZNF367Q7RTV3 350 aa14.25□□□□□ -0.13
UPF3A-203ENST00000474056 C1QL4Q86Z23 238 aa14.25□□□□□ -0.13
UPF3A-203ENST00000474056 C5orf56Q8N8D9 126 aa14.25□□□□□ -0.13
UPF3A-203ENST00000474056 CT45A3Q8NHU0 189 aa14.25□□□□□ -0.13
UPF3A-203ENST00000474056 RTN4IP1Q8WWV3 396 aaPredicted RBP14.25□□□□□ -0.13
UPF3A-203ENST00000474056 FAAP24Q9BTP7 215 aa14.25□□□□□ -0.13
UPF3A-203ENST00000474056 PLGRKTQ9HBL7 147 aa14.25□□□□□ -0.13
UPF3A-203ENST00000474056 SLC17A2O00624 439 aa14.24□□□□□ -0.13
UPF3A-203ENST00000474056 OPN1MWP04001 364 aa14.24□□□□□ -0.13
UPF3A-203ENST00000474056 OPN1MW2P0DN77 364 aa14.24□□□□□ -0.13
UPF3A-203ENST00000474056 OPN1MW3P0DN78 364 aa14.24□□□□□ -0.13
UPF3A-203ENST00000474056 IL3RAP26951 378 aa14.24□□□□□ -0.13
UPF3A-203ENST00000474056 CD83Q01151 205 aa14.24□□□□□ -0.13
UPF3A-203ENST00000474056 EBI3Q14213 229 aa14.24□□□□□ -0.13
UPF3A-203ENST00000474056 GNMTQ14749 295 aa14.24□□□□□ -0.13
UPF3A-203ENST00000474056 CENPVQ7Z7K6 275 aaPredicted RBP14.24□□□□□ -0.13
UPF3A-203ENST00000474056 OR52L2PQ8NGH6 319 aa14.24□□□□□ -0.13
UPF3A-203ENST00000474056 RBMXL1Q96E39 390 aaKnown RBP14.24□□□□□ -0.13
UPF3A-203ENST00000474056 LPAR5Q9H1C0 372 aa14.24□□□□□ -0.13
UPF3A-203ENST00000474056 ACOT13Q9NPJ3 140 aa14.24□□□□□ -0.13
UPF3A-203ENST00000474056 OR2S2Q9NQN1 319 aa14.24□□□□□ -0.13
UPF3A-203ENST00000474056 KCNIP1Q9NZI2 227 aa14.24□□□□□ -0.13
UPF3A-203ENST00000474056 FGF16O43320 207 aa14.23□□□□□ -0.13
UPF3A-203ENST00000474056 ARSBP15848 533 aa14.23□□□□□ -0.13
UPF3A-203ENST00000474056 BLVRBP30043 206 aaPredicted RBP14.23□□□□□ -0.13
UPF3A-203ENST00000474056 ZNF137PP52743 207 aa14.23□□□□□ -0.13
UPF3A-203ENST00000474056 CLDN12P56749 244 aa14.23□□□□□ -0.13
UPF3A-203ENST00000474056 HMGN3Q15651 99 aa14.23□□□□□ -0.13
UPF3A-203ENST00000474056 MORN2Q502X0 79 aa14.23□□□□□ -0.13
UPF3A-203ENST00000474056 TCTEX1D4Q5JR98 221 aa14.23□□□□□ -0.13
UPF3A-203ENST00000474056 Q6ZPA2 131 aa14.23□□□□□ -0.13
UPF3A-203ENST00000474056 ZNF554Q86TJ5 538 aa14.23□□□□□ -0.13
UPF3A-203ENST00000474056 IZUMO1Q8IYV9 350 aa14.23□□□□□ -0.13
UPF3A-203ENST00000474056 R3HDM4Q96D70 268 aa14.23□□□□□ -0.13
UPF3A-203ENST00000474056 EAF1Q96JC9 268 aaPredicted RBP14.23□□□□□ -0.13
UPF3A-203ENST00000474056 JPT1Q9UK76 154 aa14.23□□□□□ -0.13
UPF3A-203ENST00000474056 PRKDCP78527 4128 aaKnown RBP14.22□□□□□ -0.13
UPF3A-203ENST00000474056 A0A1W2PRX2 142 aa14.22□□□□□ -0.13
UPF3A-203ENST00000474056 ZNF736B4DX44 427 aaPredicted RBP14.22□□□□□ -0.13
UPF3A-203ENST00000474056 SOCS1O15524 211 aa14.22□□□□□ -0.13
UPF3A-203ENST00000474056 PPP1CCP36873 323 aaKnown RBP14.22□□□□□ -0.13
UPF3A-203ENST00000474056 GABARAPL2P60520 117 aa14.22□□□□□ -0.13
UPF3A-203ENST00000474056 EMX1Q04741 257 aaPredicted RBP14.22□□□□□ -0.13
UPF3A-203ENST00000474056 RAB11BQ15907 218 aa14.22□□□□□ -0.13
UPF3A-203ENST00000474056 OR2W3Q7Z3T1 314 aa14.22□□□□□ -0.13
UPF3A-203ENST00000474056 TGIF2LXQ8IUE1 241 aa14.22□□□□□ -0.13
UPF3A-203ENST00000474056 OR51D1Q8NGF3 324 aa14.22□□□□□ -0.13
UPF3A-203ENST00000474056 PLEKHJ1Q9NW61 149 aa14.22□□□□□ -0.13
UPF3A-203ENST00000474056 SHISA3A0PJX4 238 aa14.21□□□□□ -0.13
UPF3A-203ENST00000474056 NAPSAO96009 420 aa14.21□□□□□ -0.13
UPF3A-203ENST00000474056 CD1BP29016 333 aa14.21□□□□□ -0.13
UPF3A-203ENST00000474056 HTD2P86397 168 aa14.21□□□□□ -0.13
UPF3A-203ENST00000474056 PDLIM3Q53GG5 364 aaPredicted RBP14.21□□□□□ -0.13
UPF3A-203ENST00000474056 ZNF880Q6PDB4 577 aa14.21□□□□□ -0.13
UPF3A-203ENST00000474056 SVOPQ8N4V2 548 aa14.21□□□□□ -0.13
UPF3A-203ENST00000474056 Q8N6K4 173 aa14.21□□□□□ -0.13
UPF3A-203ENST00000474056 OR2T10Q8NGZ9 312 aa14.21□□□□□ -0.13
UPF3A-203ENST00000474056 URM1Q9BTM9 101 aaKnown RBP14.21□□□□□ -0.13
UPF3A-203ENST00000474056 ABHD14AQ9BUJ0 271 aa14.21□□□□□ -0.13
UPF3A-203ENST00000474056 NDUFB11Q9NX14 153 aa14.21□□□□□ -0.13
UPF3A-203ENST00000474056 V9GY05 133 aa14.21□□□□□ -0.13
UPF3A-203ENST00000474056 FOXI3A8MTJ6 420 aaPredicted RBP14.2□□□□□ -0.14
UPF3A-203ENST00000474056 G3V4G9 280 aa14.2□□□□□ -0.14
UPF3A-203ENST00000474056 TXNL1O43396 289 aa14.2□□□□□ -0.14
UPF3A-203ENST00000474056 YPEL1O60688 119 aa14.2□□□□□ -0.14
UPF3A-203ENST00000474056 TMEM50BP56557 158 aa14.2□□□□□ -0.14
UPF3A-203ENST00000474056 PLA2G7Q13093 441 aa14.2□□□□□ -0.14
UPF3A-203ENST00000474056 HES5Q5TA89 166 aa14.2□□□□□ -0.14
UPF3A-203ENST00000474056 ODF3L1Q8IXM7 274 aa14.2□□□□□ -0.14
UPF3A-203ENST00000474056 FAM89BQ8N5H3 189 aa14.2□□□□□ -0.14
UPF3A-203ENST00000474056 OR4F17Q8NGA8 305 aa14.2□□□□□ -0.14
UPF3A-203ENST00000474056 OR4X2Q8NGF9 303 aa14.2□□□□□ -0.14
UPF3A-203ENST00000474056 FAM3DQ96BQ1 224 aa14.2□□□□□ -0.14
UPF3A-203ENST00000474056 GALMQ96C23 342 aa14.2□□□□□ -0.14
UPF3A-203ENST00000474056 NOL4LQ96MY1 436 aaPredicted RBP14.2□□□□□ -0.14
UPF3A-203ENST00000474056 YPEL2Q96QA6 119 aa14.2□□□□□ -0.14
UPF3A-203ENST00000474056 OR4F4Q96R69 305 aa14.2□□□□□ -0.14
UPF3A-203ENST00000474056 HDHD3Q9BSH5 251 aaPredicted RBP14.2□□□□□ -0.14
UPF3A-203ENST00000474056 CHMP1AQ9HD42 196 aaPredicted RBP14.2□□□□□ -0.14
UPF3A-203ENST00000474056 AK3Q9UIJ7 227 aa14.2□□□□□ -0.14
UPF3A-203ENST00000474056 LINC00527Q9UJ94 153 aa14.2□□□□□ -0.14
UPF3A-203ENST00000474056 TCRBV4S1A1TA0A5B7 111 aa14.19□□□□□ -0.14
UPF3A-203ENST00000474056 NCBP2LA6PVI3 153 aaKnown RBP14.19□□□□□ -0.14
UPF3A-203ENST00000474056 MOSP00540 346 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms