RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 LIPGQ9Y5X9 500 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 TMEM56-RWDD3S4R434 201 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 TECTAO75443 2155 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 MYO15AQ9UKN7 3530 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 PHF3Q92576 2039 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 FAM208BQ5VWN6 2430 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 MAP1BP46821 2468 aaKnown RBP4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 TMEM30CPA0ZSE6 113 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 TMEM218A2RU14 115 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 BTBD17A6NE02 478 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 A6NLC8 198 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 MPTX1A8MV57 137 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 IQCF6A8MYZ5 107 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 UMAD1C9J7I0 102 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 NPIPB11E5RHQ5 1161 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 H0YIZ8 118 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 TRIM77I1YAP6 450 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 HSD17B6O14756 317 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 HS3ST1O14792 307 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 SYNGR1O43759 233 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 TIMM8AO60220 97 aaPredicted RBP4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 PITX3O75364 302 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 SCO1O75880 301 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 SCAF4O95104 1147 aaKnown RBP4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 IFNA5P01569 189 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 HOXD4P09016 255 aaPredicted RBP4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 OR8U9P0C7N5 309 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 SLC25A6P12236 298 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 WNT5AP41221 380 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 ID4P47928 161 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 UCP2P55851 309 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 ZNF616Q08AN1 781 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 CATR1Q13166 79 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 P2RY6Q15077 328 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 SMIM21Q3B7S5 101 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 ZNF718Q3SXZ3 478 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 IGSF11Q5DX21 431 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 PXDC1Q5TGL8 231 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 TRAT1Q6PIZ9 186 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 Q6ZRG5 221 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 LYZL2Q7Z4W2 148 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 PIP4P1Q86T03 277 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 VASH2Q86V25 355 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 CXorf67Q86X51 503 aaPredicted RBP4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 BATF2Q8N1L9 274 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 GAPTQ8N292 157 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 OR2C3Q8N628 320 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 SLC35G3Q8N808 338 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 OR10V1Q8NGI7 309 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 MRPL30Q8TCC3 161 aaKnown RBP4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 GLYATL2Q8WU03 294 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 IL1F10Q8WWZ1 152 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 MSI2Q96DH6 328 aaKnown RBP4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 SMIM8Q96KF7 97 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 CABLES2Q9BTV7 478 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 SEC11CQ9BY50 192 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 SMIM3Q9BZL3 60 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 MS4A5Q9H3V2 200 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 UNKLQ9H9P5 680 aaKnown RBP4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 DLL3Q9NYJ7 618 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 KPTNQ9Y664 436 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 FLNBO75369 2602 aaKnown RBP4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 WDR87Q6ZQQ6 2873 aa4.98□□□□□ -1.61
ATPAF1-204ENST00000474020 DMXL1Q9Y485 3027 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 TRIOO75962 3097 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 RIF1Q5UIP0 2472 aaKnown RBP4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 SDK2Q58EX2 2172 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 COL27A1Q8IZC6 1860 aaPredicted RBP4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 A0A1B0GU03 582 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 SPAARA0A1B0GVQ0 90 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 MED19A0JLT2 244 aaPredicted RBP4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 MSGN1A6NI15 193 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 SIRPB1O00241 398 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 TOR1AO14656 332 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 NKX2-8O15522 239 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 HOXA3O43365 443 aaPredicted RBP4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 SSSCA1O60232 199 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 TUSC2O75896 110 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 HBE1P02100 147 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 CRYABP02511 175 aaKnown RBP4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 ACAA1P09110 424 aaPredicted RBP4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 SCTP09683 121 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 ZNF14P17017 642 aaPredicted RBP4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 IGHV1-2P23083 117 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 F2RP25116 425 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 UCP1P25874 307 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 IL2RGP31785 369 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 ARHGDIBP52566 201 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 AKR1C2P52895 323 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 DVL1P1P54792 670 aaPredicted RBP4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 FOXG1P55316 489 aaPredicted RBP4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 SELENOVP59797 346 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 RPS23P62266 143 aaKnown RBP4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 HBG1P69891 147 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 HBG2P69892 147 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 PDCD1Q15116 288 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 MSMO1Q15800 293 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 DEFB109BQ30KR1 87 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 SPATA46Q5T0L3 261 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 ATP1A1-AS1Q5TC04 95 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms