RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 TRAV9-1A0A075B6T8 112 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 TRAV8-6A0A0B4J262 113 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 IGSF23A1L1A6 192 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 TMEM250H0YL14 139 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 K7EP34 96 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 ZNF207O43670 478 aaKnown RBP4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 RAD51DO75771 328 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 CATP04040 527 aaKnown RBP4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 GPR12P47775 334 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 PPP1CBP62140 327 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 RPL23P62829 140 aaKnown RBP4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 STUMQ69YW2 141 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 Q6ZSN1 163 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 TMEM123Q8N131 208 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 FBXL14Q8N1E6 418 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 CITED1Q99966 193 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 SS18L2Q9UHA2 77 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 HHLA2Q9UM44 414 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 DAPP1Q9UN19 280 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 SLC17A4Q9Y2C5 497 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 KLHDC2Q9Y2U9 406 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 IGLV3-10A0A075B6K4 115 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 A0A1B0GUS0 222 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 PSMB11A5LHX3 300 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 ANKRD66B4E2M5 251 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 ACRV1P26436 265 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 ZNF93P35789 620 aaPredicted RBP4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 CCR2P41597 374 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 RHOBP62745 196 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 HHEXQ03014 270 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 GAGE5Q13069 117 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 GAGE6Q13070 117 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 HLA-BQ31612 363 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 MPV17L2Q567V2 206 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 FAM78AQ5JUQ0 283 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 Q6ZRM9 215 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 SYT13Q7L8C5 426 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 LHFPL1Q86WI0 220 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 BAGE3Q86Y29 109 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 BAGE2Q86Y30 109 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 ZNF683Q8IZ20 524 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 ZNF676Q8N7Q3 588 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 TSTD1Q8NFU3 115 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 OR10V1Q8NGI7 309 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 OR5H2Q8NGV7 314 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 OR13G1Q8NGZ3 307 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 FAM46BQ96A09 425 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 MRPL24Q96A35 216 aaKnown RBP4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 GMPPAQ96IJ6 420 aaPredicted RBP4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 Q96M85 177 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 KXD1Q9BQD3 176 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 NPFFR1Q9GZQ6 430 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 ZDHHC11Q9H8X9 412 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 PDFQ9HBH1 243 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 NPVFQ9HCQ7 196 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 BPIFA1Q9NP55 256 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 NRN1Q9NPD7 142 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 THYN1Q9P016 225 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 CKLFQ9UBR5 152 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 RCL1Q9Y2P8 373 aaKnown RBP4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 WASHC3Q9Y3C0 194 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 NLRC5Q86WI3 1866 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 KIF26AQ9ULI4 1882 aaPredicted RBP4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 OR2AG2A6NM03 316 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 DUSP11O75319 330 aaKnown RBP4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 UPK3AO75631 287 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 S1PR2O95136 353 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 NRASP01111 189 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 KRASP01116 189 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 HLA-DRB1P01911 266 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 GYPBP06028 91 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 LINC00869P0C866 280 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 PNMTP11086 282 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 CST5P28325 142 aaPredicted RBP4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 OPRM1P35372 400 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 GNG4P50150 75 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 ZNF83P51522 516 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 ATP5IP56385 69 aaPredicted RBP4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 HIST1H1AQ02539 215 aaPredicted RBP4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 CD226Q15762 336 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 BOD1L2Q8IYS8 172 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 ZNF418Q8TF45 676 aaPredicted RBP4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 MBD3L1Q8WWY6 194 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 RLN3Q8WXF3 142 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 GALMQ96C23 342 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 CHRDL1Q9BU40 450 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 SSBP3Q9BWW4 388 aaPredicted RBP4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 ST20Q9HBF5 79 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 ZNF160Q9HCG1 818 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 LRIT1Q9P2V4 623 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 B3GALT5Q9Y2C3 310 aa4.38□□□□□ -1.71
TMEM39A-206ENST00000473684 PLXNA4Q9HCM2 1894 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 PGPEP1LA6NFU8 196 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 B9A039 149 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 P2RY10O00398 339 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 ST8SIA3O43173 380 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 NTN1O95631 604 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 MT-ATP6P00846 226 aa4.37□□□□□ -1.71
TMEM39A-206ENST00000473684 ELANEP08246 267 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms