RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 TMEM252Q8N6L7 170 aa12.66□□□□□ -0.38
UBXN11-213ENST00000472155 SARAFQ96BY9 339 aa12.66□□□□□ -0.38
UBXN11-213ENST00000472155 C5orf30Q96GV9 206 aa12.66□□□□□ -0.38
UBXN11-213ENST00000472155 DCTN5Q9BTE1 182 aa12.66□□□□□ -0.38
UBXN11-213ENST00000472155 ZGRF1Q86YA3 2104 aa12.66□□□□□ -0.38
UBXN11-213ENST00000472155 CNOT4O95628 575 aaKnown RBP12.65□□□□□ -0.38
UBXN11-213ENST00000472155 CGAP01215 116 aa12.65□□□□□ -0.38
UBXN11-213ENST00000472155 DANCRP0C864 163 aa12.65□□□□□ -0.38
UBXN11-213ENST00000472155 EIF5AP63241 154 aaKnown RBP12.65□□□□□ -0.38
UBXN11-213ENST00000472155 C10orf91Q5T1B1 145 aa12.65□□□□□ -0.38
UBXN11-213ENST00000472155 PRSS33Q8NF86 280 aa12.65□□□□□ -0.38
UBXN11-213ENST00000472155 OR8G5Q8NG78 346 aa12.65□□□□□ -0.38
UBXN11-213ENST00000472155 ZNF71Q9NQZ8 489 aaPredicted RBP12.65□□□□□ -0.38
UBXN11-213ENST00000472155 PARP11Q9NR21 331 aa12.65□□□□□ -0.38
UBXN11-213ENST00000472155 POLDIP2Q9Y2S7 368 aa12.65□□□□□ -0.38
UBXN11-213ENST00000472155 RBM7Q9Y580 266 aaKnown RBP12.65□□□□□ -0.38
UBXN11-213ENST00000472155 IGHV2OR16-5A0A0B4J2B6 119 aa12.65□□□□□ -0.38
UBXN11-213ENST00000472155 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.65□□□□□ -0.38
UBXN11-213ENST00000472155 TIMM8AO60220 97 aaPredicted RBP12.65□□□□□ -0.38
UBXN11-213ENST00000472155 TSPAN9O75954 239 aa12.65□□□□□ -0.38
UBXN11-213ENST00000472155 HOXC12P31275 282 aa12.65□□□□□ -0.38
UBXN11-213ENST00000472155 PPP1CCP36873 323 aaKnown RBP12.65□□□□□ -0.38
UBXN11-213ENST00000472155 AKR1C3P42330 323 aa12.65□□□□□ -0.38
UBXN11-213ENST00000472155 DYNLT3P51808 116 aa12.65□□□□□ -0.38
UBXN11-213ENST00000472155 ID3Q02535 119 aa12.65□□□□□ -0.38
UBXN11-213ENST00000472155 ZNF585BQ52M93 769 aa12.65□□□□□ -0.38
UBXN11-213ENST00000472155 OR2B11Q5JQS5 317 aa12.65□□□□□ -0.38
UBXN11-213ENST00000472155 EIF5AL1Q6IS14 154 aaKnown RBP12.65□□□□□ -0.38
UBXN11-213ENST00000472155 C22orf34Q6ZV56 151 aa12.65□□□□□ -0.38
UBXN11-213ENST00000472155 OR52L2PQ8NGH6 319 aa12.65□□□□□ -0.38
UBXN11-213ENST00000472155 OR5D13Q8NGL4 314 aa12.65□□□□□ -0.38
UBXN11-213ENST00000472155 OR5C1Q8NGR4 320 aa12.65□□□□□ -0.38
UBXN11-213ENST00000472155 SCRT1Q9BWW7 348 aa12.65□□□□□ -0.38
UBXN11-213ENST00000472155 RNF115Q9Y4L5 304 aa12.65□□□□□ -0.38
UBXN11-213ENST00000472155 SH2D1BO14796 132 aa12.64□□□□□ -0.39
UBXN11-213ENST00000472155 IGKV1-5P01602 117 aa12.64□□□□□ -0.39
UBXN11-213ENST00000472155 CD5P06127 495 aa12.64□□□□□ -0.39
UBXN11-213ENST00000472155 OR3A1P47881 315 aa12.64□□□□□ -0.39
UBXN11-213ENST00000472155 SRPXP78539 464 aa12.64□□□□□ -0.39
UBXN11-213ENST00000472155 AKIRIN2Q53H80 203 aa12.64□□□□□ -0.39
UBXN11-213ENST00000472155 WDR82Q6UXN9 313 aa12.64□□□□□ -0.39
UBXN11-213ENST00000472155 PLPPR2Q96GM1 343 aa12.64□□□□□ -0.39
UBXN11-213ENST00000472155 AKR1E2Q96JD6 320 aa12.64□□□□□ -0.39
UBXN11-213ENST00000472155 PLSCR4Q9NRQ2 329 aa12.64□□□□□ -0.39
UBXN11-213ENST00000472155 LYRM2Q9NU23 88 aaPredicted RBP12.64□□□□□ -0.39
UBXN11-213ENST00000472155 CACFD1Q9UGQ2 172 aa12.64□□□□□ -0.39
UBXN11-213ENST00000472155 KIAA1324LA8MWY0 1029 aaPredicted RBP12.64□□□□□ -0.39
UBXN11-213ENST00000472155 WRBO00258 174 aa12.64□□□□□ -0.39
UBXN11-213ENST00000472155 TOR1AO14656 332 aa12.64□□□□□ -0.39
UBXN11-213ENST00000472155 SWI5Q1ZZU3 235 aa12.64□□□□□ -0.39
UBXN11-213ENST00000472155 COQ2Q96H96 371 aa12.64□□□□□ -0.39
UBXN11-213ENST00000472155 CARHSP1Q9Y2V2 147 aaKnown RBP12.64□□□□□ -0.39
UBXN11-213ENST00000472155 IGHV3-43A0A0B4J1X8 118 aa12.63□□□□□ -0.39
UBXN11-213ENST00000472155 C12orf77C9JDV5 145 aa12.63□□□□□ -0.39
UBXN11-213ENST00000472155 HEXAP06865 529 aa12.63□□□□□ -0.39
UBXN11-213ENST00000472155 SERPINE2P07093 398 aa12.63□□□□□ -0.39
UBXN11-213ENST00000472155 IGHV3-43DP0DP04 118 aa12.63□□□□□ -0.39
UBXN11-213ENST00000472155 ATP6V0CP27449 155 aa12.63□□□□□ -0.39
UBXN11-213ENST00000472155 F2RL1P55085 397 aa12.63□□□□□ -0.39
UBXN11-213ENST00000472155 CCL20P78556 96 aa12.63□□□□□ -0.39
UBXN11-213ENST00000472155 TMEM267Q0VDI3 215 aaPredicted RBP12.63□□□□□ -0.39
UBXN11-213ENST00000472155 SVBPQ8N300 66 aa12.63□□□□□ -0.39
UBXN11-213ENST00000472155 DRAM1Q8N682 238 aa12.63□□□□□ -0.39
UBXN11-213ENST00000472155 LYPD6BQ8NI32 183 aa12.63□□□□□ -0.39
UBXN11-213ENST00000472155 RFESDQ8TAC1 157 aa12.63□□□□□ -0.39
UBXN11-213ENST00000472155 MRGPRDQ8TDS7 321 aa12.63□□□□□ -0.39
UBXN11-213ENST00000472155 RBMXL1Q96E39 390 aaKnown RBP12.63□□□□□ -0.39
UBXN11-213ENST00000472155 HES4Q9HCC6 221 aa12.63□□□□□ -0.39
UBXN11-213ENST00000472155 FAM212BQ9NTI7 297 aaPredicted RBP12.63□□□□□ -0.39
UBXN11-213ENST00000472155 MBNL3Q9NUK0 354 aaKnown RBP12.63□□□□□ -0.39
UBXN11-213ENST00000472155 FAM215AQ9Y5M1 114 aa12.63□□□□□ -0.39
UBXN11-213ENST00000472155 TLN1Q9Y490 2541 aaKnown RBP12.63□□□□□ -0.39
UBXN11-213ENST00000472155 BORCS7-ASMTA0A0B4J1R7 106 aa12.63□□□□□ -0.39
UBXN11-213ENST00000472155 GPR37O15354 613 aa12.63□□□□□ -0.39
UBXN11-213ENST00000472155 RAMP3O60896 148 aa12.63□□□□□ -0.39
UBXN11-213ENST00000472155 CEACAM4O75871 244 aa12.63□□□□□ -0.39
UBXN11-213ENST00000472155 PRH1P02810 166 aa12.63□□□□□ -0.39
UBXN11-213ENST00000472155 SEC11BP0C7V7 166 aa12.63□□□□□ -0.39
UBXN11-213ENST00000472155 IAPPP10997 89 aa12.63□□□□□ -0.39
UBXN11-213ENST00000472155 CTRB1P17538 263 aa12.63□□□□□ -0.39
UBXN11-213ENST00000472155 GLIPR1P48060 266 aa12.63□□□□□ -0.39
UBXN11-213ENST00000472155 CAMLGP49069 296 aa12.63□□□□□ -0.39
UBXN11-213ENST00000472155 PPT1P50897 306 aa12.63□□□□□ -0.39
UBXN11-213ENST00000472155 ZNF83P51522 516 aa12.63□□□□□ -0.39
UBXN11-213ENST00000472155 CTRB2Q6GPI1 263 aa12.63□□□□□ -0.39
UBXN11-213ENST00000472155 ZNF474Q6S9Z5 364 aaPredicted RBP12.63□□□□□ -0.39
UBXN11-213ENST00000472155 ZNF808Q8N4W9 903 aaPredicted RBP12.63□□□□□ -0.39
UBXN11-213ENST00000472155 FAM213BQ8TBF2 198 aa12.63□□□□□ -0.39
UBXN11-213ENST00000472155 CACNG5Q9UF02 275 aa12.63□□□□□ -0.39
UBXN11-213ENST00000472155 CLEC18AA5D8T8 446 aa12.62□□□□□ -0.39
UBXN11-213ENST00000472155 J3QW42 95 aa12.62□□□□□ -0.39
UBXN11-213ENST00000472155 EGR1P18146 543 aa12.62□□□□□ -0.39
UBXN11-213ENST00000472155 SSTR5P35346 364 aa12.62□□□□□ -0.39
UBXN11-213ENST00000472155 CLEC18CQ8NCF0 446 aa12.62□□□□□ -0.39
UBXN11-213ENST00000472155 C19orf12Q9NSK7 152 aa12.62□□□□□ -0.39
UBXN11-213ENST00000472155 DUSP13Q9UII6 198 aa12.62□□□□□ -0.39
UBXN11-213ENST00000472155 PROCRQ9UNN8 238 aa12.62□□□□□ -0.39
UBXN11-213ENST00000472155 WIPI2Q9Y4P8 454 aa12.62□□□□□ -0.39
UBXN11-213ENST00000472155 DEFB108AA8MXU0 73 aa12.62□□□□□ -0.39
UBXN11-213ENST00000472155 PITX3O75364 302 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms